RNA–Protein interactions for RNA: ENST00000555518.5

LINC00643-203, long intergenic non-protein coding RNA 643, humanhuman

TSL 4

Gene LINC00643, Length 552 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-203ENST00000555518 CDKAL1Q5VV42 579 aa7.53□□□□□ -1.2
LINC00643-203ENST00000555518 CIAPIN1Q6FI81 312 aa7.53□□□□□ -1.2
LINC00643-203ENST00000555518 DPP8Q6V1X1 898 aaPredicted RBP7.53□□□□□ -1.2
LINC00643-203ENST00000555518 HDXQ7Z353 690 aa7.53□□□□□ -1.2
LINC00643-203ENST00000555518 ZNF804AQ7Z570 1209 aa7.53□□□□□ -1.2
LINC00643-203ENST00000555518 ADGRA1Q86SQ6 560 aa7.53□□□□□ -1.2
LINC00643-203ENST00000555518 TTLL6Q8N841 843 aa7.53□□□□□ -1.2
LINC00643-203ENST00000555518 GRIN3AQ8TCU5 1115 aa7.53□□□□□ -1.2
LINC00643-203ENST00000555518 APPBP2Q92624 585 aa7.53□□□□□ -1.2
LINC00643-203ENST00000555518 MAP4K1Q92918 833 aa7.53□□□□□ -1.2
LINC00643-203ENST00000555518 DIRC2Q96SL1 478 aa7.53□□□□□ -1.2
LINC00643-203ENST00000555518 PUS7LQ9H0K6 701 aaKnown RBP7.53□□□□□ -1.2
LINC00643-203ENST00000555518 UPF2Q9HAU5 1272 aaKnown RBP7.53□□□□□ -1.2
LINC00643-203ENST00000555518 DCP1AQ9NPI6 582 aaPredicted RBP7.53□□□□□ -1.2
LINC00643-203ENST00000555518 FAM205AQ6ZU69 1335 aa7.52□□□□□ -1.2
LINC00643-203ENST00000555518 ZNF532Q9HCE3 1301 aa7.52□□□□□ -1.2
LINC00643-203ENST00000555518 TCAF2A6NFQ2 919 aa7.52□□□□□ -1.21
LINC00643-203ENST00000555518 B8ZZF3 427 aa7.52□□□□□ -1.21
LINC00643-203ENST00000555518 IDH1O75874 414 aaKnown RBP7.52□□□□□ -1.21
LINC00643-203ENST00000555518 KRT1P04264 644 aa7.52□□□□□ -1.21
LINC00643-203ENST00000555518 PRDX5P30044 214 aa7.52□□□□□ -1.21
LINC00643-203ENST00000555518 NECTIN1Q15223 517 aa7.52□□□□□ -1.21
LINC00643-203ENST00000555518 ENOX2Q16206 610 aaKnown RBP7.52□□□□□ -1.21
LINC00643-203ENST00000555518 KCNA10Q16322 511 aa7.52□□□□□ -1.21
LINC00643-203ENST00000555518 SLC9C2Q5TAH2 1124 aa7.52□□□□□ -1.21
LINC00643-203ENST00000555518 VPS53Q5VIR6 699 aa7.52□□□□□ -1.21
LINC00643-203ENST00000555518 TMPRSS7Q7RTY8 843 aa7.52□□□□□ -1.21
LINC00643-203ENST00000555518 TMC7Q7Z402 723 aa7.52□□□□□ -1.21
LINC00643-203ENST00000555518 UBE3DQ7Z6J8 389 aa7.52□□□□□ -1.21
LINC00643-203ENST00000555518 VPS37DQ86XT2 251 aa7.52□□□□□ -1.21
LINC00643-203ENST00000555518 ABHD4Q8TB40 342 aa7.52□□□□□ -1.21
LINC00643-203ENST00000555518 COA1Q9GZY4 146 aa7.52□□□□□ -1.21
LINC00643-203ENST00000555518 CD320Q9NPF0 282 aa7.52□□□□□ -1.21
LINC00643-203ENST00000555518 DCTN4Q9UJW0 460 aa7.52□□□□□ -1.21
LINC00643-203ENST00000555518 CD2APQ9Y5K6 639 aa7.52□□□□□ -1.21
LINC00643-203ENST00000555518 RBM8AQ9Y5S9 174 aaKnown RBP7.52□□□□□ -1.21
LINC00643-203ENST00000555518 ST14Q9Y5Y6 855 aa7.52□□□□□ -1.21
LINC00643-203ENST00000555518 TAF6LQ9Y6J9 622 aa7.52□□□□□ -1.21
LINC00643-203ENST00000555518 CAPN6Q9Y6Q1 641 aa7.52□□□□□ -1.21
LINC00643-203ENST00000555518 FER1L6Q2WGJ9 1857 aa7.51□□□□□ -1.21
LINC00643-203ENST00000555518 PSME4Q14997 1843 aa7.51□□□□□ -1.21
LINC00643-203ENST00000555518 PNMA6FA0A0J9YX94 578 aa7.51□□□□□ -1.21
LINC00643-203ENST00000555518 NPIPB6E9PJ23 425 aa7.51□□□□□ -1.21
LINC00643-203ENST00000555518 H3BS24 57 aa7.51□□□□□ -1.21
LINC00643-203ENST00000555518 GPAA1O43292 621 aa7.51□□□□□ -1.21
LINC00643-203ENST00000555518 HSPD1P10809 573 aaKnown RBP7.51□□□□□ -1.21
LINC00643-203ENST00000555518 ANAPC15P60006 121 aa7.51□□□□□ -1.21
LINC00643-203ENST00000555518 KIAA2012Q0VF49 1180 aa7.51□□□□□ -1.21
LINC00643-203ENST00000555518 MAP3K12Q12852 859 aa7.51□□□□□ -1.21
LINC00643-203ENST00000555518 CHAF1AQ13111 956 aaPredicted RBP7.51□□□□□ -1.21
LINC00643-203ENST00000555518 MAGEB6Q8N7X4 407 aa7.51□□□□□ -1.21
LINC00643-203ENST00000555518 RGS22Q8NE09 1264 aa7.51□□□□□ -1.21
LINC00643-203ENST00000555518 NLGN2Q8NFZ4 835 aa7.51□□□□□ -1.21
LINC00643-203ENST00000555518 NSUN4Q96CB9 384 aaKnown RBP7.51□□□□□ -1.21
LINC00643-203ENST00000555518 PSMD1Q99460 953 aa7.51□□□□□ -1.21
LINC00643-203ENST00000555518 MIPEPQ99797 713 aa7.51□□□□□ -1.21
LINC00643-203ENST00000555518 RIOK1Q9BRS2 568 aaKnown RBP7.51□□□□□ -1.21
LINC00643-203ENST00000555518 DSCC1Q9BVC3 393 aa7.51□□□□□ -1.21
LINC00643-203ENST00000555518 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.51□□□□□ -1.21
LINC00643-203ENST00000555518 JAG2Q9Y219 1238 aa7.51□□□□□ -1.21
LINC00643-203ENST00000555518 SNX14Q9Y5W7 946 aa7.51□□□□□ -1.21
LINC00643-203ENST00000555518 ARFGEF1Q9Y6D6 1849 aa7.5□□□□□ -1.21
LINC00643-203ENST00000555518 RPAP1Q9BWH6 1393 aaPredicted RBP7.5□□□□□ -1.21
LINC00643-203ENST00000555518 SLC27A2O14975 620 aa7.5□□□□□ -1.21
LINC00643-203ENST00000555518 IGSF3O75054 1194 aa7.5□□□□□ -1.21
LINC00643-203ENST00000555518 SRFP11831 508 aa7.5□□□□□ -1.21
LINC00643-203ENST00000555518 ANP32AP39687 249 aaKnown RBP7.5□□□□□ -1.21
LINC00643-203ENST00000555518 FGD1P98174 961 aa7.5□□□□□ -1.21
LINC00643-203ENST00000555518 MECOMQ03112 1051 aa7.5□□□□□ -1.21
LINC00643-203ENST00000555518 DSC3Q14574 896 aa7.5□□□□□ -1.21
LINC00643-203ENST00000555518 LRRFIP1Q32MZ4 808 aaKnown RBP7.5□□□□□ -1.21
LINC00643-203ENST00000555518 CCDC93Q567U6 631 aa7.5□□□□□ -1.21
LINC00643-203ENST00000555518 LCE5AQ5TCM9 118 aa7.5□□□□□ -1.21
LINC00643-203ENST00000555518 CREB3L3Q68CJ9 461 aa7.5□□□□□ -1.21
LINC00643-203ENST00000555518 ZSCAN25Q6NSZ9 544 aa7.5□□□□□ -1.21
LINC00643-203ENST00000555518 HID1Q8IV36 788 aa7.5□□□□□ -1.21
LINC00643-203ENST00000555518 LCORLQ8N3X6 602 aa7.5□□□□□ -1.21
LINC00643-203ENST00000555518 CERS5Q8N5B7 392 aa7.5□□□□□ -1.21
LINC00643-203ENST00000555518 WDR66Q8TBY9 1149 aa7.5□□□□□ -1.21
LINC00643-203ENST00000555518 STRBPQ96SI9 672 aaKnown RBP7.5□□□□□ -1.21
LINC00643-203ENST00000555518 EYA3Q99504 573 aa7.5□□□□□ -1.21
LINC00643-203ENST00000555518 WNT10AQ9GZT5 417 aa7.5□□□□□ -1.21
LINC00643-203ENST00000555518 EPB41L4AQ9HCS5 686 aaPredicted RBP7.5□□□□□ -1.21
LINC00643-203ENST00000555518 LRP2BPQ9P2M1 347 aa7.5□□□□□ -1.21
LINC00643-203ENST00000555518 SNCAIPQ9Y6H5 919 aa7.5□□□□□ -1.21
LINC00643-203ENST00000555518 LAMA4Q16363 1823 aa7.5□□□□□ -1.21
LINC00643-203ENST00000555518 CCDC88AQ3V6T2 1871 aa7.49□□□□□ -1.21
LINC00643-203ENST00000555518 YDJCA8MPS7 323 aa7.49□□□□□ -1.21
LINC00643-203ENST00000555518 PRR33A8MZF0 331 aa7.49□□□□□ -1.21
LINC00643-203ENST00000555518 PRKAB2O43741 272 aa7.49□□□□□ -1.21
LINC00643-203ENST00000555518 MBD4O95243 580 aa7.49□□□□□ -1.21
LINC00643-203ENST00000555518 CYP21A2P08686 494 aa7.49□□□□□ -1.21
LINC00643-203ENST00000555518 SLBPQ14493 270 aaKnown RBP eCLIP7.49□□□□□ -1.21
LINC00643-203ENST00000555518 RABEP1Q15276 862 aa7.49□□□□□ -1.21
LINC00643-203ENST00000555518 ADCK5Q3MIX3 580 aa7.49□□□□□ -1.21
LINC00643-203ENST00000555518 DALRD3Q5D0E6 543 aaKnown RBP7.49□□□□□ -1.21
LINC00643-203ENST00000555518 TTLL5Q6EMB2 1281 aa7.49□□□□□ -1.21
LINC00643-203ENST00000555518 LETMD1Q6P1Q0 360 aa7.49□□□□□ -1.21
LINC00643-203ENST00000555518 TMED8Q6PL24 325 aaPredicted RBP7.49□□□□□ -1.21
LINC00643-203ENST00000555518 ATG14Q6ZNE5 492 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms