RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 SCAND2PQ9GZW5 306 aaPredicted RBP14.26□□□□□ -0.13
SYNE2-219ENST00000555323 AZI2Q9H6S1 392 aa14.26□□□□□ -0.13
SYNE2-219ENST00000555323 ERAP1Q9NZ08 941 aa14.26□□□□□ -0.13
SYNE2-219ENST00000555323 SAMM50Q9Y512 469 aa14.26□□□□□ -0.13
SYNE2-219ENST00000555323 A0A1W2PQ45 241 aaPredicted RBP14.25□□□□□ -0.13
SYNE2-219ENST00000555323 A0A1W2PQY0 241 aa14.25□□□□□ -0.13
SYNE2-219ENST00000555323 VWA3AA6NCI4 1184 aa14.25□□□□□ -0.13
SYNE2-219ENST00000555323 CHMP2AO43633 222 aa14.25□□□□□ -0.13
SYNE2-219ENST00000555323 LYPLA2O95372 231 aa14.25□□□□□ -0.13
SYNE2-219ENST00000555323 SPATA31C1P0DKV0 1188 aa14.25□□□□□ -0.13
SYNE2-219ENST00000555323 ATP4AP20648 1035 aa14.25□□□□□ -0.13
SYNE2-219ENST00000555323 MUTP22033 750 aa14.25□□□□□ -0.13
SYNE2-219ENST00000555323 RPA1P27694 616 aa14.25□□□□□ -0.13
SYNE2-219ENST00000555323 UTP14CQ5TAP6 766 aaKnown RBP14.25□□□□□ -0.13
SYNE2-219ENST00000555323 C1orf53Q5VUE5 145 aa14.25□□□□□ -0.13
SYNE2-219ENST00000555323 FAM160B1Q5W0V3 765 aa14.25□□□□□ -0.13
SYNE2-219ENST00000555323 NCAPH2Q6IBW4 605 aa14.25□□□□□ -0.13
SYNE2-219ENST00000555323 CLEC17AQ6ZS10 378 aa14.25□□□□□ -0.13
SYNE2-219ENST00000555323 KRI1Q8N9T8 703 aaKnown RBP14.25□□□□□ -0.13
SYNE2-219ENST00000555323 ZNF579Q8NAF0 562 aaKnown RBP14.25□□□□□ -0.13
SYNE2-219ENST00000555323 SLC43A3Q8NBI5 491 aa14.25□□□□□ -0.13
SYNE2-219ENST00000555323 CHAMP1Q96JM3 812 aa14.25□□□□□ -0.13
SYNE2-219ENST00000555323 EIF2AK1Q9BQI3 630 aaKnown RBP14.25□□□□□ -0.13
SYNE2-219ENST00000555323 POLR3CQ9BUI4 534 aaPredicted RBP14.25□□□□□ -0.13
SYNE2-219ENST00000555323 ZNF302Q9NR11 478 aa14.25□□□□□ -0.13
SYNE2-219ENST00000555323 LRWD1Q9UFC0 647 aa14.25□□□□□ -0.13
SYNE2-219ENST00000555323 ZNF215Q9UL58 517 aaPredicted RBP14.25□□□□□ -0.13
SYNE2-219ENST00000555323 FRMPD3Q5JV73 1810 aa14.25□□□□□ -0.13
SYNE2-219ENST00000555323 GRIN2DO15399 1336 aa14.24□□□□□ -0.13
SYNE2-219ENST00000555323 IGSF9BQ9UPX0 1349 aa14.24□□□□□ -0.13
SYNE2-219ENST00000555323 CCDC85CA6NKD9 419 aa14.24□□□□□ -0.13
SYNE2-219ENST00000555323 BACH1O14867 736 aa14.24□□□□□ -0.13
SYNE2-219ENST00000555323 SLC26A4O43511 780 aa14.24□□□□□ -0.13
SYNE2-219ENST00000555323 ZNF862O60290 1169 aa14.24□□□□□ -0.13
SYNE2-219ENST00000555323 DKC1O60832 514 aaKnown RBP eCLIP14.24□□□□□ -0.13
SYNE2-219ENST00000555323 STBD1O95210 358 aa14.24□□□□□ -0.13
SYNE2-219ENST00000555323 MYCNP04198 464 aaPredicted RBP14.24□□□□□ -0.13
SYNE2-219ENST00000555323 ZNF286BP0CG31 522 aa14.24□□□□□ -0.13
SYNE2-219ENST00000555323 QARSP47897 775 aaKnown RBP14.24□□□□□ -0.13
SYNE2-219ENST00000555323 CDK7P50613 346 aa14.24□□□□□ -0.13
SYNE2-219ENST00000555323 PSMC5P62195 406 aa14.24□□□□□ -0.13
SYNE2-219ENST00000555323 GRIN1Q05586 938 aa14.24□□□□□ -0.13
SYNE2-219ENST00000555323 AXDND1Q5T1B0 1012 aaPredicted RBP14.24□□□□□ -0.13
SYNE2-219ENST00000555323 NECAB2Q7Z6G3 386 aa14.24□□□□□ -0.13
SYNE2-219ENST00000555323 SESTD1Q86VW0 696 aa14.24□□□□□ -0.13
SYNE2-219ENST00000555323 CATSPER3Q86XQ3 398 aa14.24□□□□□ -0.13
SYNE2-219ENST00000555323 C4orf19Q8IY42 314 aa14.24□□□□□ -0.13
SYNE2-219ENST00000555323 KCTD17Q8N5Z5 321 aa14.24□□□□□ -0.13
SYNE2-219ENST00000555323 ERMNQ8TAM6 284 aa14.24□□□□□ -0.13
SYNE2-219ENST00000555323 LEO1Q8WVC0 666 aaPredicted RBP14.24□□□□□ -0.13
SYNE2-219ENST00000555323 GLG1Q92896 1179 aa14.24□□□□□ -0.13
SYNE2-219ENST00000555323 TNPO1Q92973 898 aaKnown RBP14.24□□□□□ -0.13
SYNE2-219ENST00000555323 ATP6V0A1Q93050 837 aa14.24□□□□□ -0.13
SYNE2-219ENST00000555323 PAWRQ96IZ0 340 aaKnown RBP14.24□□□□□ -0.13
SYNE2-219ENST00000555323 MMTAG2Q9BU76 263 aaKnown RBP14.24□□□□□ -0.13
SYNE2-219ENST00000555323 SENP6Q9GZR1 1112 aaPredicted RBP14.24□□□□□ -0.13
SYNE2-219ENST00000555323 RNPEPQ9H4A4 650 aa14.24□□□□□ -0.13
SYNE2-219ENST00000555323 TUFT1Q9NNX1 390 aa14.24□□□□□ -0.13
SYNE2-219ENST00000555323 STARD7Q9NQZ5 370 aa14.24□□□□□ -0.13
SYNE2-219ENST00000555323 RGL1Q9NZL6 768 aa14.24□□□□□ -0.13
SYNE2-219ENST00000555323 GABBR1Q9UBS5 961 aa14.24□□□□□ -0.13
SYNE2-219ENST00000555323 DOCK5Q9H7D0 1870 aa14.23□□□□□ -0.13
SYNE2-219ENST00000555323 CUTAO60888 179 aa14.23□□□□□ -0.13
SYNE2-219ENST00000555323 XRCC6P12956 609 aaKnown RBP eCLIP14.23□□□□□ -0.13
SYNE2-219ENST00000555323 PSEN2P49810 448 aa14.23□□□□□ -0.13
SYNE2-219ENST00000555323 PTPN11Q06124 597 aaPredicted RBP14.23□□□□□ -0.13
SYNE2-219ENST00000555323 ITGA7Q13683 1181 aa14.23□□□□□ -0.13
SYNE2-219ENST00000555323 MFSD10Q14728 455 aa14.23□□□□□ -0.13
SYNE2-219ENST00000555323 SNX17Q15036 470 aa14.23□□□□□ -0.13
SYNE2-219ENST00000555323 KIAA0753Q2KHM9 967 aa14.23□□□□□ -0.13
SYNE2-219ENST00000555323 HYIQ5T013 277 aa14.23□□□□□ -0.13
SYNE2-219ENST00000555323 HAUS3Q68CZ6 603 aa14.23□□□□□ -0.13
SYNE2-219ENST00000555323 PDXDC2PQ6P474 469 aa14.23□□□□□ -0.13
SYNE2-219ENST00000555323 NFRKBQ6P4R8 1299 aa14.23□□□□□ -0.13
SYNE2-219ENST00000555323 SLC39A5Q6ZMH5 540 aa14.23□□□□□ -0.13
SYNE2-219ENST00000555323 TRIM50Q86XT4 487 aa14.23□□□□□ -0.13
SYNE2-219ENST00000555323 DIS3LQ8TF46 1054 aaKnown RBP14.23□□□□□ -0.13
SYNE2-219ENST00000555323 BBXQ8WY36 941 aaPredicted RBP14.23□□□□□ -0.13
SYNE2-219ENST00000555323 DYDC2Q96IM9 177 aa14.23□□□□□ -0.13
SYNE2-219ENST00000555323 SPATA32Q96LK8 384 aa14.23□□□□□ -0.13
SYNE2-219ENST00000555323 CCSER1Q9C0I3 900 aa14.23□□□□□ -0.13
SYNE2-219ENST00000555323 CSRNP2Q9H175 543 aa14.23□□□□□ -0.13
SYNE2-219ENST00000555323 C11orf49Q9H6J7 331 aa14.23□□□□□ -0.13
SYNE2-219ENST00000555323 ZSWIM4Q9H7M6 989 aa14.23□□□□□ -0.13
SYNE2-219ENST00000555323 WRAP73Q9P2S5 460 aaPredicted RBP14.23□□□□□ -0.13
SYNE2-219ENST00000555323 PCDHA7Q9UN72 937 aa14.23□□□□□ -0.13
SYNE2-219ENST00000555323 A0A0U1RQG5 324 aaPredicted RBP14.22□□□□□ -0.13
SYNE2-219ENST00000555323 ARVCFO00192 962 aa14.22□□□□□ -0.13
SYNE2-219ENST00000555323 HBP1O60381 514 aa14.22□□□□□ -0.13
SYNE2-219ENST00000555323 MED24O75448 989 aa14.22□□□□□ -0.13
SYNE2-219ENST00000555323 CDC25AP30304 524 aa14.22□□□□□ -0.13
SYNE2-219ENST00000555323 HOXC8P31273 242 aa14.22□□□□□ -0.13
SYNE2-219ENST00000555323 PLCB4Q15147 1175 aa14.22□□□□□ -0.13
SYNE2-219ENST00000555323 UGCGQ16739 394 aa14.22□□□□□ -0.13
SYNE2-219ENST00000555323 NBPF20Q3BBV1 942 aa14.22□□□□□ -0.13
SYNE2-219ENST00000555323 XKR3Q5GH77 459 aa14.22□□□□□ -0.13
SYNE2-219ENST00000555323 KRT79Q5XKE5 535 aa14.22□□□□□ -0.13
SYNE2-219ENST00000555323 ADALQ6DHV7 355 aa14.22□□□□□ -0.13
SYNE2-219ENST00000555323 BANK1Q8NDB2 785 aa14.22□□□□□ -0.13
SYNE2-219ENST00000555323 ATP8B4Q8TF62 1192 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms