RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 LONP1P36776 959 aaKnown RBP16.05■□□□□ 0.16
CHD8-208ENST00000555301 MNX1P50219 401 aaPredicted RBP16.05■□□□□ 0.16
CHD8-208ENST00000555301 IL17AQ16552 155 aa16.05■□□□□ 0.16
CHD8-208ENST00000555301 HAUS3Q68CZ6 603 aa16.05■□□□□ 0.16
CHD8-208ENST00000555301 SWSAP1Q6NVH7 229 aa16.05■□□□□ 0.16
CHD8-208ENST00000555301 CCDC60Q8IWA6 550 aaPredicted RBP16.05■□□□□ 0.16
CHD8-208ENST00000555301 KRI1Q8N9T8 703 aaKnown RBP16.05■□□□□ 0.16
CHD8-208ENST00000555301 TNPO1Q92973 898 aaKnown RBP16.05■□□□□ 0.16
CHD8-208ENST00000555301 ATP6V0A1Q93050 837 aa16.05■□□□□ 0.16
CHD8-208ENST00000555301 SEZ6LQ9BYH1 1024 aa16.05■□□□□ 0.16
CHD8-208ENST00000555301 TUT1Q9H6E5 874 aaKnown RBP16.05■□□□□ 0.16
CHD8-208ENST00000555301 STARD7Q9NQZ5 370 aa16.05■□□□□ 0.16
CHD8-208ENST00000555301 GABBR1Q9UBS5 961 aa16.05■□□□□ 0.16
CHD8-208ENST00000555301 RCOR1Q9UKL0 485 aa16.05■□□□□ 0.16
CHD8-208ENST00000555301 A0A1W2PQ45 241 aaPredicted RBP16.04■□□□□ 0.16
CHD8-208ENST00000555301 A0A1W2PQY0 241 aa16.04■□□□□ 0.16
CHD8-208ENST00000555301 PSMC5P62195 406 aa16.04■□□□□ 0.16
CHD8-208ENST00000555301 KRT79Q5XKE5 535 aa16.04■□□□□ 0.16
CHD8-208ENST00000555301 PDXDC2PQ6P474 469 aa16.04■□□□□ 0.16
CHD8-208ENST00000555301 NECAB2Q7Z6G3 386 aa16.04■□□□□ 0.16
CHD8-208ENST00000555301 KAT2BQ92831 832 aa16.04■□□□□ 0.16
CHD8-208ENST00000555301 VTI1AQ96AJ9 217 aa16.04■□□□□ 0.16
CHD8-208ENST00000555301 SPATA32Q96LK8 384 aa16.04■□□□□ 0.16
CHD8-208ENST00000555301 PCYT2Q99447 389 aa16.04■□□□□ 0.16
CHD8-208ENST00000555301 EIF2AK1Q9BQI3 630 aaKnown RBP16.04■□□□□ 0.16
CHD8-208ENST00000555301 C11orf49Q9H6J7 331 aa16.04■□□□□ 0.16
CHD8-208ENST00000555301 FBXO2Q9UK22 296 aaPredicted RBP16.04■□□□□ 0.16
CHD8-208ENST00000555301 MAFBQ9Y5Q3 323 aaPredicted RBP16.04■□□□□ 0.16
CHD8-208ENST00000555301 IGSF9BQ9UPX0 1349 aa16.03■□□□□ 0.16
CHD8-208ENST00000555301 HAS3O00219 553 aa16.03■□□□□ 0.16
CHD8-208ENST00000555301 COL6A1P12109 1028 aa16.03■□□□□ 0.16
CHD8-208ENST00000555301 QARSP47897 775 aaKnown RBP16.03■□□□□ 0.16
CHD8-208ENST00000555301 PSEN2P49810 448 aa16.03■□□□□ 0.16
CHD8-208ENST00000555301 MFSD10Q14728 455 aa16.03■□□□□ 0.16
CHD8-208ENST00000555301 KIAA0753Q2KHM9 967 aa16.03■□□□□ 0.16
CHD8-208ENST00000555301 TRIM50Q86XT4 487 aa16.03■□□□□ 0.16
CHD8-208ENST00000555301 PAWRQ96IZ0 340 aaKnown RBP16.03■□□□□ 0.16
CHD8-208ENST00000555301 HSD17B14Q9BPX1 270 aa16.03■□□□□ 0.16
CHD8-208ENST00000555301 POLR3CQ9BUI4 534 aaPredicted RBP16.03■□□□□ 0.16
CHD8-208ENST00000555301 SENP6Q9GZR1 1112 aaPredicted RBP16.03■□□□□ 0.16
CHD8-208ENST00000555301 ZSWIM4Q9H7M6 989 aa16.03■□□□□ 0.16
CHD8-208ENST00000555301 BRCA2P51587 3418 aa16.03■□□□□ 0.16
CHD8-208ENST00000555301 A0A0U1RQG5 324 aaPredicted RBP16.02■□□□□ 0.16
CHD8-208ENST00000555301 SLITRK3O94933 977 aa16.02■□□□□ 0.16
CHD8-208ENST00000555301 MUTP22033 750 aa16.02■□□□□ 0.16
CHD8-208ENST00000555301 RPA1P27694 616 aa16.02■□□□□ 0.16
CHD8-208ENST00000555301 ME1P48163 572 aa16.02■□□□□ 0.16
CHD8-208ENST00000555301 SOX10P56693 466 aa16.02■□□□□ 0.16
CHD8-208ENST00000555301 CKAP2LQ8IYA6 745 aa16.02■□□□□ 0.16
CHD8-208ENST00000555301 ZNF579Q8NAF0 562 aaKnown RBP16.02■□□□□ 0.16
CHD8-208ENST00000555301 BANK1Q8NDB2 785 aa16.02■□□□□ 0.16
CHD8-208ENST00000555301 SNX29Q8TEQ0 813 aa16.02■□□□□ 0.16
CHD8-208ENST00000555301 DIS3LQ8TF46 1054 aaKnown RBP16.02■□□□□ 0.16
CHD8-208ENST00000555301 LEO1Q8WVC0 666 aaPredicted RBP16.02■□□□□ 0.16
CHD8-208ENST00000555301 DYDC2Q96IM9 177 aa16.02■□□□□ 0.16
CHD8-208ENST00000555301 FAM167AQ96KS9 214 aa16.02■□□□□ 0.16
CHD8-208ENST00000555301 LXNQ9BS40 222 aa16.02■□□□□ 0.16
CHD8-208ENST00000555301 TUFT1Q9NNX1 390 aa16.02■□□□□ 0.16
CHD8-208ENST00000555301 SLC26A4O43511 780 aa16.01■□□□□ 0.15
CHD8-208ENST00000555301 CUTAO60888 179 aa16.01■□□□□ 0.15
CHD8-208ENST00000555301 MARK3P27448 753 aa16.01■□□□□ 0.15
CHD8-208ENST00000555301 UBA7P41226 1012 aa16.01■□□□□ 0.15
CHD8-208ENST00000555301 CHMP4BP1P59074 171 aa16.01■□□□□ 0.15
CHD8-208ENST00000555301 PSMC6P62333 389 aa16.01■□□□□ 0.15
CHD8-208ENST00000555301 CYP4A11Q02928 519 aa16.01■□□□□ 0.15
CHD8-208ENST00000555301 GRIN1Q05586 938 aa16.01■□□□□ 0.15
CHD8-208ENST00000555301 ITGA7Q13683 1181 aa16.01■□□□□ 0.15
CHD8-208ENST00000555301 CSPP1Q1MSJ5 1256 aa16.01■□□□□ 0.15
CHD8-208ENST00000555301 NBPF20Q3BBV1 942 aa16.01■□□□□ 0.15
CHD8-208ENST00000555301 NFRKBQ6P4R8 1299 aa16.01■□□□□ 0.15
CHD8-208ENST00000555301 UBE2Q1Q7Z7E8 422 aa16.01■□□□□ 0.15
CHD8-208ENST00000555301 TPH2Q8IWU9 490 aa16.01■□□□□ 0.15
CHD8-208ENST00000555301 C4orf19Q8IY42 314 aa16.01■□□□□ 0.15
CHD8-208ENST00000555301 C7orf31Q8N865 590 aa16.01■□□□□ 0.15
CHD8-208ENST00000555301 ATP8B4Q8TF62 1192 aa16.01■□□□□ 0.15
CHD8-208ENST00000555301 BBXQ8WY36 941 aaPredicted RBP16.01■□□□□ 0.15
CHD8-208ENST00000555301 CHAMP1Q96JM3 812 aa16.01■□□□□ 0.15
CHD8-208ENST00000555301 CSRNP2Q9H175 543 aa16.01■□□□□ 0.15
CHD8-208ENST00000555301 NRBP2Q9NSY0 501 aa16.01■□□□□ 0.15
CHD8-208ENST00000555301 RGL1Q9NZL6 768 aa16.01■□□□□ 0.15
CHD8-208ENST00000555301 TRPC6Q9Y210 931 aa16.01■□□□□ 0.15
CHD8-208ENST00000555301 KDM3AQ9Y4C1 1321 aa16■□□□□ 0.15
CHD8-208ENST00000555301 POTEB3A0JP26 581 aa16■□□□□ 0.15
CHD8-208ENST00000555301 ARVCFO00192 962 aa16■□□□□ 0.15
CHD8-208ENST00000555301 ZNF862O60290 1169 aa16■□□□□ 0.15
CHD8-208ENST00000555301 HBP1O60381 514 aa16■□□□□ 0.15
CHD8-208ENST00000555301 LYPLA2O95372 231 aa16■□□□□ 0.15
CHD8-208ENST00000555301 OATP04181 439 aa16■□□□□ 0.15
CHD8-208ENST00000555301 TXLNAP40222 546 aa16■□□□□ 0.15
CHD8-208ENST00000555301 CCT6AP40227 531 aaKnown RBP16■□□□□ 0.15
CHD8-208ENST00000555301 PRKCEQ02156 737 aa16■□□□□ 0.15
CHD8-208ENST00000555301 PTPN11Q06124 597 aaPredicted RBP16■□□□□ 0.15
CHD8-208ENST00000555301 CTTNQ14247 550 aaKnown RBP16■□□□□ 0.15
CHD8-208ENST00000555301 PLCB4Q15147 1175 aa16■□□□□ 0.15
CHD8-208ENST00000555301 UGCGQ16739 394 aa16■□□□□ 0.15
CHD8-208ENST00000555301 XKR3Q5GH77 459 aa16■□□□□ 0.15
CHD8-208ENST00000555301 C1orf53Q5VUE5 145 aa16■□□□□ 0.15
CHD8-208ENST00000555301 POTEBQ6S5H4 581 aa16■□□□□ 0.15
CHD8-208ENST00000555301 SESTD1Q86VW0 696 aa16■□□□□ 0.15
CHD8-208ENST00000555301 CATSPER3Q86XQ3 398 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms