RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 MTBPQ96DY7 904 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 SP110Q9HB58 689 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 PCDHA5Q9Y5H7 936 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 ECEL1O95672 775 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 KITP10721 976 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 ANKRD49Q8WVL7 239 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 UBE2TQ9NPD8 197 aaPredicted RBP7.39□□□□□ -1.23
SYNE2-216ENST00000555002 C5orf58C9J3I9 102 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 ZAP70P43403 619 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 HDLBPQ00341 1268 aaKnown RBP7.39□□□□□ -1.23
SYNE2-216ENST00000555002 SRRM1Q8IYB3 904 aaKnown RBP7.39□□□□□ -1.23
SYNE2-216ENST00000555002 SDR42E1Q8WUS8 393 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 FAF2Q96CS3 445 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 PCDHB15Q9Y5E8 787 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 IREB2P48200 963 aaKnown RBP7.39□□□□□ -1.23
SYNE2-216ENST00000555002 ANKRD13CQ8N6S4 541 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 OTUD7AQ8TE49 926 aaPredicted RBP7.39□□□□□ -1.23
SYNE2-216ENST00000555002 LPIN2Q92539 896 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 DYRK4Q9NR20 520 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 INTS9Q9NV88 658 aaKnown RBP7.39□□□□□ -1.23
SYNE2-216ENST00000555002 PCF11O94913 1555 aaKnown RBP7.39□□□□□ -1.23
SYNE2-216ENST00000555002 MAGI1Q96QZ7 1491 aaPredicted RBP7.39□□□□□ -1.23
SYNE2-216ENST00000555002 DDHD2O94830 711 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 SNAP25P60880 206 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 ZSCAN26Q16670 478 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 MFSD4BQ5TF39 518 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 CATSPER4Q7RTX7 472 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 OR8K1Q8NGG5 319 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 MSTO1Q9BUK6 570 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 PLEKHM2Q8IWE5 1019 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 SERPINI1Q99574 410 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 PDE11AQ9HCR9 933 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 PPARGC1AQ9UBK2 798 aaKnown RBP7.39□□□□□ -1.23
SYNE2-216ENST00000555002 SEL1LQ9UBV2 794 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 FARP1Q9Y4F1 1045 aaPredicted RBP7.39□□□□□ -1.23
SYNE2-216ENST00000555002 RAD17O75943 681 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 ZNF827Q17R98 1081 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 CCDC142Q17RM4 750 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 C11orf96Q7Z7L8 435 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 THEM5Q8N1Q8 247 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 ASIC4Q96FT7 647 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 TRPC5Q9UL62 973 aaPredicted RBP7.39□□□□□ -1.23
SYNE2-216ENST00000555002 IFT140Q96RY7 1462 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 GOLGA8MH3BSY2 632 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 CLIC2O15247 247 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 KRT8P05787 483 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 RUNDC3BQ96NL0 473 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 NDUFB5O43674 189 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 ACSL3O95573 720 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 PPP6R3Q5H9R7 873 aaPredicted RBP7.39□□□□□ -1.23
SYNE2-216ENST00000555002 EXOC8Q8IYI6 725 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 OR6B3Q8NGW1 331 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 SPATS2LQ9NUQ6 558 aaKnown RBP7.39□□□□□ -1.23
SYNE2-216ENST00000555002 ARHGAP10A1A4S6 786 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 GADD45BO75293 160 aaPredicted RBP7.38□□□□□ -1.23
SYNE2-216ENST00000555002 OCA2Q04671 838 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 GRIN1Q05586 938 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 DHX9Q08211 1270 aaKnown RBP7.38□□□□□ -1.23
SYNE2-216ENST00000555002 RPAINQ86UA6 219 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 DDX42Q86XP3 938 aaKnown RBP eCLIP7.38□□□□□ -1.23
SYNE2-216ENST00000555002 GINM1Q9NU53 330 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 PDE4DIPQ5VU43 2346 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 IQANK1A0A1B0GTG1 560 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 DIAPH2O60879 1101 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 PAPOLAP51003 745 aaKnown RBP7.38□□□□□ -1.23
SYNE2-216ENST00000555002 C2orf54Q08AI8 447 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 SIX5Q8N196 739 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 RAB42Q8N4Z0 105 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 TRIM11Q96F44 468 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 ZNF229Q9UJW7 825 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 AFPP02771 609 aaKnown RBP7.38□□□□□ -1.23
SYNE2-216ENST00000555002 SLFN14P0C7P3 912 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 NEK2P51955 445 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 PLTPP55058 493 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 PRKCQQ04759 706 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 GPBP1L1Q9HC44 474 aaPredicted RBP7.38□□□□□ -1.23
SYNE2-216ENST00000555002 CTSWP56202 376 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 GJC2Q5T442 439 aaPredicted RBP7.38□□□□□ -1.23
SYNE2-216ENST00000555002 CC2D1AQ6P1N0 951 aaPredicted RBP7.38□□□□□ -1.23
SYNE2-216ENST00000555002 IQCDQ96DY2 449 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 SPZ1Q9BXG8 430 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 PFKFB1P16118 471 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 PASD1Q8IV76 773 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 MRFAP1L1Q96HT8 127 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 FLT4P35916 1363 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 CXCR5P32302 372 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 TSPY1Q01534 308 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 NEK8Q86SG6 692 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 DDIASQ8IXT1 998 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 C10orf53Q8N6V4 93 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 TWF2Q6IBS0 349 aaKnown RBP7.38□□□□□ -1.23
SYNE2-216ENST00000555002 ADA2Q9NZK5 511 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 A0A0G2JND7 137 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 EFCAB8A8MWE9 144 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 PPP3CCP48454 512 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 TSC22D1Q15714 1073 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 SYTL3Q4VX76 610 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 PKN3Q6P5Z2 889 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 MIGA2Q7L4E1 593 aa7.38□□□□□ -1.23
SYNE2-216ENST00000555002 PPP1R14AQ96A00 147 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms