RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 ATP5JP18859 108 aa5.58□□□□□ -1.52
ATXN3-231ENST00000554994 WEE1P30291 646 aa5.58□□□□□ -1.52
ATXN3-231ENST00000554994 AAMPQ13685 434 aa5.58□□□□□ -1.52
ATXN3-231ENST00000554994 COL19A1Q14993 1142 aa5.58□□□□□ -1.52
ATXN3-231ENST00000554994 CCL14Q16627 93 aa5.58□□□□□ -1.52
ATXN3-231ENST00000554994 COX20Q5RI15 118 aa5.58□□□□□ -1.52
ATXN3-231ENST00000554994 DCAF15Q66K64 600 aa5.58□□□□□ -1.52
ATXN3-231ENST00000554994 KRT40Q6A162 431 aa5.58□□□□□ -1.52
ATXN3-231ENST00000554994 ZSCAN25Q6NSZ9 544 aa5.58□□□□□ -1.52
ATXN3-231ENST00000554994 NFXL1Q6ZNB6 911 aa5.58□□□□□ -1.52
ATXN3-231ENST00000554994 STK11IPQ8N1F8 1099 aa5.58□□□□□ -1.52
ATXN3-231ENST00000554994 CRACR2BQ8N4Y2 399 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-231ENST00000554994 OTUD7AQ8TE49 926 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-231ENST00000554994 FAM151AQ8WW52 585 aa5.58□□□□□ -1.52
ATXN3-231ENST00000554994 HOOK2Q96ED9 719 aa5.58□□□□□ -1.52
ATXN3-231ENST00000554994 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.58□□□□□ -1.52
ATXN3-231ENST00000554994 GJD2Q9UKL4 321 aa5.58□□□□□ -1.52
ATXN3-231ENST00000554994 USP34Q70CQ2 3546 aa5.58□□□□□ -1.52
ATXN3-231ENST00000554994 DOCK1Q14185 1865 aa5.58□□□□□ -1.52
ATXN3-231ENST00000554994 REV3LO60673 3130 aa5.57□□□□□ -1.52
ATXN3-231ENST00000554994 ZNF532Q9HCE3 1301 aa5.57□□□□□ -1.52
ATXN3-231ENST00000554994 MYH6P13533 1939 aa5.57□□□□□ -1.52
ATXN3-231ENST00000554994 CHD9Q3L8U1 2897 aa5.57□□□□□ -1.52
ATXN3-231ENST00000554994 GPR75-ASB3A0A0A6YYF3 556 aa5.57□□□□□ -1.52
ATXN3-231ENST00000554994 RFXAPO00287 272 aa5.57□□□□□ -1.52
ATXN3-231ENST00000554994 ZKSCAN1P17029 563 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-231ENST00000554994 MX1P20591 662 aa5.57□□□□□ -1.52
ATXN3-231ENST00000554994 HDAC1Q13547 482 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-231ENST00000554994 FBLN7Q53RD9 439 aa5.57□□□□□ -1.52
ATXN3-231ENST00000554994 GJC2Q5T442 439 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-231ENST00000554994 ERMP1Q7Z2K6 904 aa5.57□□□□□ -1.52
ATXN3-231ENST00000554994 ADGRA1Q86SQ6 560 aa5.57□□□□□ -1.52
ATXN3-231ENST00000554994 FAM83AQ86UY5 434 aa5.57□□□□□ -1.52
ATXN3-231ENST00000554994 NCAPG2Q86XI2 1143 aa5.57□□□□□ -1.52
ATXN3-231ENST00000554994 ETFBKMTQ8IXQ9 262 aa5.57□□□□□ -1.52
ATXN3-231ENST00000554994 C12orf50Q8NA57 414 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-231ENST00000554994 ZNF512BQ96KM6 892 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-231ENST00000554994 HAUS7Q99871 368 aa5.57□□□□□ -1.52
ATXN3-231ENST00000554994 FSD1Q9BTV5 496 aa5.57□□□□□ -1.52
ATXN3-231ENST00000554994 ZNF341Q9BYN7 854 aa5.57□□□□□ -1.52
ATXN3-231ENST00000554994 ARMT1Q9H993 441 aa5.57□□□□□ -1.52
ATXN3-231ENST00000554994 PALD1Q9ULE6 856 aa5.57□□□□□ -1.52
ATXN3-231ENST00000554994 PRRC2BQ5JSZ5 2229 aaKnown RBP5.57□□□□□ -1.52
ATXN3-231ENST00000554994 PHIPQ8WWQ0 1821 aa5.57□□□□□ -1.52
ATXN3-231ENST00000554994 KMT2BQ9UMN6 2715 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-231ENST00000554994 TPRP12270 2363 aaKnown RBP5.57□□□□□ -1.52
ATXN3-231ENST00000554994 NCOR2Q9Y618 2525 aa5.56□□□□□ -1.52
ATXN3-231ENST00000554994 PTPRFP10586 1907 aa5.56□□□□□ -1.52
ATXN3-231ENST00000554994 PDS5AQ29RF7 1337 aaKnown RBP5.56□□□□□ -1.52
ATXN3-231ENST00000554994 PLXNB2O15031 1838 aa5.56□□□□□ -1.52
ATXN3-231ENST00000554994 FRMPD3Q5JV73 1810 aa5.56□□□□□ -1.52
ATXN3-231ENST00000554994 ZFHX4Q86UP3 3567 aa5.56□□□□□ -1.52
ATXN3-231ENST00000554994 DDTLA6NHG4 134 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-231ENST00000554994 FAM196BA6NMK8 535 aa5.56□□□□□ -1.52
ATXN3-231ENST00000554994 ENTPD3O75355 529 aa5.56□□□□□ -1.52
ATXN3-231ENST00000554994 PRNPP04156 253 aa5.56□□□□□ -1.52
ATXN3-231ENST00000554994 PDE6AP16499 860 aa5.56□□□□□ -1.52
ATXN3-231ENST00000554994 CNGA1P29973 690 aa5.56□□□□□ -1.52
ATXN3-231ENST00000554994 TLE2Q04725 743 aa5.56□□□□□ -1.52
ATXN3-231ENST00000554994 FPGSQ05932 587 aa5.56□□□□□ -1.52
ATXN3-231ENST00000554994 FAM110CQ1W6H9 321 aa5.56□□□□□ -1.52
ATXN3-231ENST00000554994 LRRFIP1Q32MZ4 808 aaKnown RBP5.56□□□□□ -1.52
ATXN3-231ENST00000554994 FKBP1CQ5VVH2 108 aa5.56□□□□□ -1.52
ATXN3-231ENST00000554994 ANO1Q5XXA6 986 aa5.56□□□□□ -1.52
ATXN3-231ENST00000554994 SLC39A5Q6ZMH5 540 aa5.56□□□□□ -1.52
ATXN3-231ENST00000554994 CCDC84Q86UT8 332 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-231ENST00000554994 CHD1LQ86WJ1 897 aa5.56□□□□□ -1.52
ATXN3-231ENST00000554994 AMOTL1Q8IY63 956 aa5.56□□□□□ -1.52
ATXN3-231ENST00000554994 GJD3Q8N144 294 aa5.56□□□□□ -1.52
ATXN3-231ENST00000554994 ZNF384Q8TF68 577 aa5.56□□□□□ -1.52
ATXN3-231ENST00000554994 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.56□□□□□ -1.52
ATXN3-231ENST00000554994 HERVK_113Q902F9 699 aa5.56□□□□□ -1.52
ATXN3-231ENST00000554994 FERMT2Q96AC1 680 aa5.56□□□□□ -1.52
ATXN3-231ENST00000554994 CCDC136Q96JN2 1154 aa5.56□□□□□ -1.52
ATXN3-231ENST00000554994 POP1Q99575 1024 aaKnown RBP5.56□□□□□ -1.52
ATXN3-231ENST00000554994 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.56□□□□□ -1.52
ATXN3-231ENST00000554994 CRNKL1Q9BZJ0 848 aaKnown RBP5.56□□□□□ -1.52
ATXN3-231ENST00000554994 KCNH6Q9H252 994 aa5.56□□□□□ -1.52
ATXN3-231ENST00000554994 DDX4Q9NQI0 724 aaKnown RBP5.56□□□□□ -1.52
ATXN3-231ENST00000554994 PICK1Q9NRD5 415 aa5.56□□□□□ -1.52
ATXN3-231ENST00000554994 MCM9Q9NXL9 1143 aa5.56□□□□□ -1.52
ATXN3-231ENST00000554994 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-231ENST00000554994 YBX2Q9Y2T7 364 aaKnown RBP5.56□□□□□ -1.52
ATXN3-231ENST00000554994 SLC4A4Q9Y6R1 1079 aa5.56□□□□□ -1.52
ATXN3-231ENST00000554994 GAKO14976 1311 aa5.55□□□□□ -1.52
ATXN3-231ENST00000554994 A0A0G2JMZ2 1700 aa5.55□□□□□ -1.52
ATXN3-231ENST00000554994 A0A0G2JLL6 359 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-231ENST00000554994 FAM95CA0A1B0GW59 222 aa5.55□□□□□ -1.52
ATXN3-231ENST00000554994 MINDY4BA8MYZ0 360 aa5.55□□□□□ -1.52
ATXN3-231ENST00000554994 H3BRJ5 948 aa5.55□□□□□ -1.52
ATXN3-231ENST00000554994 MPHOSPH10O00566 681 aaKnown RBP5.55□□□□□ -1.52
ATXN3-231ENST00000554994 RNF113AO15541 343 aaKnown RBP5.55□□□□□ -1.52
ATXN3-231ENST00000554994 PRKAB2O43741 272 aa5.55□□□□□ -1.52
ATXN3-231ENST00000554994 GLRX3O76003 335 aaKnown RBP5.55□□□□□ -1.52
ATXN3-231ENST00000554994 MBD4O95243 580 aa5.55□□□□□ -1.52
ATXN3-231ENST00000554994 CHGBP05060 677 aa5.55□□□□□ -1.52
ATXN3-231ENST00000554994 HLA-DOAP06340 250 aa5.55□□□□□ -1.52
ATXN3-231ENST00000554994 RAG1P15918 1043 aa5.55□□□□□ -1.52
ATXN3-231ENST00000554994 ID4P47928 161 aa5.55□□□□□ -1.52
ATXN3-231ENST00000554994 USP11P51784 963 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms