RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 POLR3CQ9BUI4 534 aaPredicted RBP18.46■□□□□ 0.55
SPTLC2-203ENST00000554901 KATNAL1Q9BW62 490 aa18.46■□□□□ 0.55
SPTLC2-203ENST00000554901 TUFT1Q9NNX1 390 aa18.46■□□□□ 0.55
SPTLC2-203ENST00000554901 ZNF302Q9NR11 478 aa18.46■□□□□ 0.55
SPTLC2-203ENST00000554901 MAFBQ9Y5Q3 323 aaPredicted RBP18.46■□□□□ 0.55
SPTLC2-203ENST00000554901 DOCK5Q9H7D0 1870 aa18.46■□□□□ 0.55
SPTLC2-203ENST00000554901 BACH1O14867 736 aa18.45■□□□□ 0.54
SPTLC2-203ENST00000554901 F2P00734 622 aa18.45■□□□□ 0.54
SPTLC2-203ENST00000554901 RPA1P27694 616 aa18.45■□□□□ 0.54
SPTLC2-203ENST00000554901 UBA7P41226 1012 aa18.45■□□□□ 0.54
SPTLC2-203ENST00000554901 QARSP47897 775 aaKnown RBP18.45■□□□□ 0.54
SPTLC2-203ENST00000554901 STAT5BP51692 787 aa18.45■□□□□ 0.54
SPTLC2-203ENST00000554901 PSMC5P62195 406 aa18.45■□□□□ 0.54
SPTLC2-203ENST00000554901 AXDND1Q5T1B0 1012 aaPredicted RBP18.45■□□□□ 0.54
SPTLC2-203ENST00000554901 ADALQ6DHV7 355 aa18.45■□□□□ 0.54
SPTLC2-203ENST00000554901 SWSAP1Q6NVH7 229 aa18.45■□□□□ 0.54
SPTLC2-203ENST00000554901 CCDC60Q8IWA6 550 aaPredicted RBP18.45■□□□□ 0.54
SPTLC2-203ENST00000554901 C16orf70Q9BSU1 422 aa18.45■□□□□ 0.54
SPTLC2-203ENST00000554901 MTG1Q9BT17 334 aaPredicted RBP18.45■□□□□ 0.54
SPTLC2-203ENST00000554901 CSRNP2Q9H175 543 aa18.45■□□□□ 0.54
SPTLC2-203ENST00000554901 ERAP1Q9NZ08 941 aa18.45■□□□□ 0.54
SPTLC2-203ENST00000554901 PCDHA7Q9UN72 937 aa18.45■□□□□ 0.54
SPTLC2-203ENST00000554901 PHF24Q9UPV7 400 aa18.45■□□□□ 0.54
SPTLC2-203ENST00000554901 TELO2Q9Y4R8 837 aa18.45■□□□□ 0.54
SPTLC2-203ENST00000554901 IGSF9BQ9UPX0 1349 aa18.45■□□□□ 0.54
SPTLC2-203ENST00000554901 ASGR1P07306 291 aa18.44■□□□□ 0.54
SPTLC2-203ENST00000554901 ACLYP53396 1101 aa18.44■□□□□ 0.54
SPTLC2-203ENST00000554901 GRIN1Q05586 938 aa18.44■□□□□ 0.54
SPTLC2-203ENST00000554901 TMEM87AQ8NBN3 555 aa18.44■□□□□ 0.54
SPTLC2-203ENST00000554901 GLG1Q92896 1179 aa18.44■□□□□ 0.54
SPTLC2-203ENST00000554901 PCYT2Q99447 389 aa18.44■□□□□ 0.54
SPTLC2-203ENST00000554901 SEZ6LQ9BYH1 1024 aa18.44■□□□□ 0.54
SPTLC2-203ENST00000554901 CCSER1Q9C0I3 900 aa18.44■□□□□ 0.54
SPTLC2-203ENST00000554901 ZSWIM4Q9H7M6 989 aa18.44■□□□□ 0.54
SPTLC2-203ENST00000554901 GABBR1Q9UBS5 961 aa18.44■□□□□ 0.54
SPTLC2-203ENST00000554901 KDM3AQ9Y4C1 1321 aa18.44■□□□□ 0.54
SPTLC2-203ENST00000554901 H3BRB1 525 aa18.44■□□□□ 0.54
SPTLC2-203ENST00000554901 SLITRK3O94933 977 aa18.44■□□□□ 0.54
SPTLC2-203ENST00000554901 LYPLA2O95372 231 aa18.44■□□□□ 0.54
SPTLC2-203ENST00000554901 MYL3P08590 195 aa18.44■□□□□ 0.54
SPTLC2-203ENST00000554901 TXLNAP40222 546 aa18.44■□□□□ 0.54
SPTLC2-203ENST00000554901 IRX5P78411 483 aaPredicted RBP18.44■□□□□ 0.54
SPTLC2-203ENST00000554901 HYIQ5T013 277 aa18.44■□□□□ 0.54
SPTLC2-203ENST00000554901 UTP14CQ5TAP6 766 aaKnown RBP18.44■□□□□ 0.54
SPTLC2-203ENST00000554901 PDXDC2PQ6P474 469 aa18.44■□□□□ 0.54
SPTLC2-203ENST00000554901 C4orf19Q8IY42 314 aa18.44■□□□□ 0.54
SPTLC2-203ENST00000554901 SNX29Q8TEQ0 813 aa18.44■□□□□ 0.54
SPTLC2-203ENST00000554901 FAM167AQ96KS9 214 aa18.44■□□□□ 0.54
SPTLC2-203ENST00000554901 CLIC6Q96NY7 704 aa18.44■□□□□ 0.54
SPTLC2-203ENST00000554901 NT5C3AQ9H0P0 336 aa18.44■□□□□ 0.54
SPTLC2-203ENST00000554901 TUT1Q9H6E5 874 aaKnown RBP18.44■□□□□ 0.54
SPTLC2-203ENST00000554901 TCHHQ07283 1943 aa18.43■□□□□ 0.54
SPTLC2-203ENST00000554901 KIAA0100Q14667 2235 aaKnown RBP18.43■□□□□ 0.54
SPTLC2-203ENST00000554901 A0A1W2PQ27 194 aa18.43■□□□□ 0.54
SPTLC2-203ENST00000554901 A0A1W2PQ64 194 aa18.43■□□□□ 0.54
SPTLC2-203ENST00000554901 A0A1W2PQD8 194 aa18.43■□□□□ 0.54
SPTLC2-203ENST00000554901 HAS3O00219 553 aa18.43■□□□□ 0.54
SPTLC2-203ENST00000554901 MYCNP04198 464 aaPredicted RBP18.43■□□□□ 0.54
SPTLC2-203ENST00000554901 CATSPER3Q86XQ3 398 aa18.43■□□□□ 0.54
SPTLC2-203ENST00000554901 ABHD8Q96I13 439 aa18.43■□□□□ 0.54
SPTLC2-203ENST00000554901 DYDC2Q96IM9 177 aa18.43■□□□□ 0.54
SPTLC2-203ENST00000554901 GLT1D1Q96MS3 346 aa18.43■□□□□ 0.54
SPTLC2-203ENST00000554901 LXNQ9BS40 222 aa18.43■□□□□ 0.54
SPTLC2-203ENST00000554901 GDPD2Q9HCC8 539 aa18.43■□□□□ 0.54
SPTLC2-203ENST00000554901 ZNF286BP0CG31 522 aa18.42■□□□□ 0.54
SPTLC2-203ENST00000554901 SPATA31C1P0DKV0 1188 aa18.42■□□□□ 0.54
SPTLC2-203ENST00000554901 XRCC6P12956 609 aaKnown RBP eCLIP18.42■□□□□ 0.54
SPTLC2-203ENST00000554901 CMA1P23946 247 aa18.42■□□□□ 0.54
SPTLC2-203ENST00000554901 CCT6AP40227 531 aaKnown RBP18.42■□□□□ 0.54
SPTLC2-203ENST00000554901 CXCL17Q6UXB2 119 aa18.42■□□□□ 0.54
SPTLC2-203ENST00000554901 CABP7Q86V35 215 aa18.42■□□□□ 0.54
SPTLC2-203ENST00000554901 KAT2BQ92831 832 aa18.42■□□□□ 0.54
SPTLC2-203ENST00000554901 CALML4Q96GE6 196 aa18.42■□□□□ 0.54
SPTLC2-203ENST00000554901 MMTAG2Q9BU76 263 aaKnown RBP18.42■□□□□ 0.54
SPTLC2-203ENST00000554901 RGL1Q9NZL6 768 aa18.42■□□□□ 0.54
SPTLC2-203ENST00000554901 PP2D1A8MPX8 630 aa18.41■□□□□ 0.54
SPTLC2-203ENST00000554901 CYP4A11Q02928 519 aa18.41■□□□□ 0.54
SPTLC2-203ENST00000554901 XKR3Q5GH77 459 aa18.41■□□□□ 0.54
SPTLC2-203ENST00000554901 RESP18Q5W5W9 173 aa18.41■□□□□ 0.54
SPTLC2-203ENST00000554901 SHC4Q6S5L8 630 aa18.41■□□□□ 0.54
SPTLC2-203ENST00000554901 TRIM50Q86XT4 487 aa18.41■□□□□ 0.54
SPTLC2-203ENST00000554901 TPH2Q8IWU9 490 aa18.41■□□□□ 0.54
SPTLC2-203ENST00000554901 BANK1Q8NDB2 785 aa18.41■□□□□ 0.54
SPTLC2-203ENST00000554901 ATP8B4Q8TF62 1192 aa18.41■□□□□ 0.54
SPTLC2-203ENST00000554901 BBXQ8WY36 941 aaPredicted RBP18.41■□□□□ 0.54
SPTLC2-203ENST00000554901 SYMPKQ92797 1274 aaKnown RBP18.41■□□□□ 0.54
SPTLC2-203ENST00000554901 CDK5RAP3Q96JB5 506 aa18.41■□□□□ 0.54
SPTLC2-203ENST00000554901 NRBP2Q9NSY0 501 aa18.41■□□□□ 0.54
SPTLC2-203ENST00000554901 CCDC39Q9UFE4 941 aa18.41■□□□□ 0.54
SPTLC2-203ENST00000554901 A0A1W2PQ45 241 aaPredicted RBP18.4■□□□□ 0.54
SPTLC2-203ENST00000554901 A0A1W2PQY0 241 aa18.4■□□□□ 0.54
SPTLC2-203ENST00000554901 GOLGA6L4A6NEF3 574 aa18.4■□□□□ 0.54
SPTLC2-203ENST00000554901 ZNF862O60290 1169 aa18.4■□□□□ 0.54
SPTLC2-203ENST00000554901 HBP1O60381 514 aa18.4■□□□□ 0.54
SPTLC2-203ENST00000554901 MED24O75448 989 aa18.4■□□□□ 0.54
SPTLC2-203ENST00000554901 CDC25AP30304 524 aa18.4■□□□□ 0.54
SPTLC2-203ENST00000554901 PSEN2P49810 448 aa18.4■□□□□ 0.54
SPTLC2-203ENST00000554901 MNX1P50219 401 aaPredicted RBP18.4■□□□□ 0.54
SPTLC2-203ENST00000554901 PRKCEQ02156 737 aa18.4■□□□□ 0.54
SPTLC2-203ENST00000554901 CTTNQ14247 550 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms