RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 SLITRK3O94933 977 aa16.06■□□□□ 0.16
SHOX2-206ENST00000554685 SMC2O95347 1197 aa16.06■□□□□ 0.16
SHOX2-206ENST00000554685 ATG7O95352 703 aa16.06■□□□□ 0.16
SHOX2-206ENST00000554685 ADCYAP1R1P41586 468 aa16.06■□□□□ 0.16
SHOX2-206ENST00000554685 CYP4A11Q02928 519 aa16.06■□□□□ 0.16
SHOX2-206ENST00000554685 TNFAIP2Q03169 654 aa16.06■□□□□ 0.16
SHOX2-206ENST00000554685 POSTNQ15063 836 aa16.06■□□□□ 0.16
SHOX2-206ENST00000554685 CAMK4Q16566 473 aa16.06■□□□□ 0.16
SHOX2-206ENST00000554685 CCDC144BQ3MJ40 725 aa16.06■□□□□ 0.16
SHOX2-206ENST00000554685 ZSCAN23Q3MJ62 389 aa16.06■□□□□ 0.16
SHOX2-206ENST00000554685 NAALADL2Q58DX5 795 aa16.06■□□□□ 0.16
SHOX2-206ENST00000554685 FAM160B1Q5W0V3 765 aa16.06■□□□□ 0.16
SHOX2-206ENST00000554685 ABHD15Q6UXT9 468 aa16.06■□□□□ 0.16
SHOX2-206ENST00000554685 RBM43Q6ZSC3 357 aaKnown RBP16.06■□□□□ 0.16
SHOX2-206ENST00000554685 TPH2Q8IWU9 490 aa16.06■□□□□ 0.16
SHOX2-206ENST00000554685 C4orf19Q8IY42 314 aa16.06■□□□□ 0.16
SHOX2-206ENST00000554685 PXYLP1Q8TE99 480 aa16.06■□□□□ 0.16
SHOX2-206ENST00000554685 PAGE5Q96GU1 130 aa16.06■□□□□ 0.16
SHOX2-206ENST00000554685 SPATA33Q96N06 139 aa16.06■□□□□ 0.16
SHOX2-206ENST00000554685 PLIN2Q99541 437 aa16.06■□□□□ 0.16
SHOX2-206ENST00000554685 RGL1Q9NZL6 768 aa16.06■□□□□ 0.16
SHOX2-206ENST00000554685 POTEFA5A3E0 1075 aa16.05■□□□□ 0.16
SHOX2-206ENST00000554685 BACH1O14867 736 aa16.05■□□□□ 0.16
SHOX2-206ENST00000554685 GTPBP6O43824 516 aaPredicted RBP16.05■□□□□ 0.16
SHOX2-206ENST00000554685 HMGCRP04035 888 aa16.05■□□□□ 0.16
SHOX2-206ENST00000554685 ZNF865P0CJ78 1059 aaPredicted RBP16.05■□□□□ 0.16
SHOX2-206ENST00000554685 XRCC6P12956 609 aaKnown RBP eCLIP16.05■□□□□ 0.16
SHOX2-206ENST00000554685 AKR1A1P14550 325 aa16.05■□□□□ 0.16
SHOX2-206ENST00000554685 SP4Q02446 784 aa16.05■□□□□ 0.16
SHOX2-206ENST00000554685 ARHGAP1Q07960 439 aa16.05■□□□□ 0.16
SHOX2-206ENST00000554685 CTTNQ14247 550 aaKnown RBP16.05■□□□□ 0.16
SHOX2-206ENST00000554685 POTEGQ6S5H5 508 aa16.05■□□□□ 0.16
SHOX2-206ENST00000554685 SH3RF1Q7Z6J0 888 aa16.05■□□□□ 0.16
SHOX2-206ENST00000554685 DNAJC5GQ8N7S2 189 aa16.05■□□□□ 0.16
SHOX2-206ENST00000554685 SLAIN1Q8ND83 568 aa16.05■□□□□ 0.16
SHOX2-206ENST00000554685 BANK1Q8NDB2 785 aa16.05■□□□□ 0.16
SHOX2-206ENST00000554685 TRIB2Q92519 343 aa16.05■□□□□ 0.16
SHOX2-206ENST00000554685 AZI2Q9H6S1 392 aa16.05■□□□□ 0.16
SHOX2-206ENST00000554685 BMP2KQ9NSY1 1161 aaPredicted RBP16.05■□□□□ 0.16
SHOX2-206ENST00000554685 BLOC1S4Q9NUP1 217 aa16.05■□□□□ 0.16
SHOX2-206ENST00000554685 KBTBD4Q9NVX7 518 aa16.05■□□□□ 0.16
SHOX2-206ENST00000554685 Q9Y3F1 56 aa16.05■□□□□ 0.16
SHOX2-206ENST00000554685 ADCY3O60266 1144 aa16.04■□□□□ 0.16
SHOX2-206ENST00000554685 EYA4O95677 639 aa16.04■□□□□ 0.16
SHOX2-206ENST00000554685 BRDTQ58F21 947 aaPredicted RBP16.04■□□□□ 0.16
SHOX2-206ENST00000554685 OTUD6AQ7L8S5 288 aa16.04■□□□□ 0.16
SHOX2-206ENST00000554685 OR6J1Q8NGC5 347 aa16.04■□□□□ 0.16
SHOX2-206ENST00000554685 PPTC7Q8NI37 304 aa16.04■□□□□ 0.16
SHOX2-206ENST00000554685 CCDC47Q96A33 483 aaKnown RBP16.04■□□□□ 0.16
SHOX2-206ENST00000554685 CCDC43Q96MW1 224 aaKnown RBP16.04■□□□□ 0.16
SHOX2-206ENST00000554685 GPR20Q99678 358 aa16.04■□□□□ 0.16
SHOX2-206ENST00000554685 GZF1Q9H116 711 aaPredicted RBP16.04■□□□□ 0.16
SHOX2-206ENST00000554685 ZNF302Q9NR11 478 aa16.04■□□□□ 0.16
SHOX2-206ENST00000554685 KIAA1468Q9P260 1216 aa16.04■□□□□ 0.16
SHOX2-206ENST00000554685 GABBR1Q9UBS5 961 aa16.04■□□□□ 0.16
SHOX2-206ENST00000554685 IGSF9BQ9UPX0 1349 aa16.03■□□□□ 0.16
SHOX2-206ENST00000554685 IGKV6D-21A0A0A0MT36 114 aa16.03■□□□□ 0.16
SHOX2-206ENST00000554685 SORBS3O60504 671 aa16.03■□□□□ 0.16
SHOX2-206ENST00000554685 PLA2G4BP0C869 781 aa16.03■□□□□ 0.16
SHOX2-206ENST00000554685 CYBAP13498 195 aa16.03■□□□□ 0.16
SHOX2-206ENST00000554685 SMPD1P17405 629 aa16.03■□□□□ 0.16
SHOX2-206ENST00000554685 TCF7P36402 384 aaPredicted RBP16.03■□□□□ 0.16
SHOX2-206ENST00000554685 AFMP43652 599 aa16.03■□□□□ 0.16
SHOX2-206ENST00000554685 SLC26A2P50443 739 aa16.03■□□□□ 0.16
SHOX2-206ENST00000554685 MDM2Q00987 491 aaPredicted RBP16.03■□□□□ 0.16
SHOX2-206ENST00000554685 MCM6Q14566 821 aa16.03■□□□□ 0.16
SHOX2-206ENST00000554685 ECM1Q16610 540 aa16.03■□□□□ 0.16
SHOX2-206ENST00000554685 SWSAP1Q6NVH7 229 aa16.03■□□□□ 0.16
SHOX2-206ENST00000554685 SASS6Q6UVJ0 657 aa16.03■□□□□ 0.16
SHOX2-206ENST00000554685 SYT2Q8N9I0 419 aaPredicted RBP16.03■□□□□ 0.16
SHOX2-206ENST00000554685 AFAP1L1Q8TED9 768 aa16.03■□□□□ 0.16
SHOX2-206ENST00000554685 COPS5Q92905 334 aa16.03■□□□□ 0.16
SHOX2-206ENST00000554685 SMARCE1Q969G3 411 aa16.03■□□□□ 0.16
SHOX2-206ENST00000554685 FAM167AQ96KS9 214 aa16.03■□□□□ 0.16
SHOX2-206ENST00000554685 GTPBP4Q9BZE4 634 aaKnown RBP16.03■□□□□ 0.16
SHOX2-206ENST00000554685 ANKEF1Q9NU02 776 aa16.03■□□□□ 0.16
SHOX2-206ENST00000554685 KCND2Q9NZV8 630 aa16.03■□□□□ 0.16
SHOX2-206ENST00000554685 DBR1Q9UK59 544 aaKnown RBP16.03■□□□□ 0.16
SHOX2-206ENST00000554685 TRIM17Q9Y577 477 aa16.03■□□□□ 0.16
SHOX2-206ENST00000554685 MCM3APO60318 1980 aa16.03■□□□□ 0.16
SHOX2-206ENST00000554685 EMSYQ7Z589 1322 aa16.02■□□□□ 0.16
SHOX2-206ENST00000554685 GSTTP1A0A1W2PQM5 241 aa16.02■□□□□ 0.16
SHOX2-206ENST00000554685 SYCE3A1L190 88 aa16.02■□□□□ 0.16
SHOX2-206ENST00000554685 ARHGEF35A5YM69 484 aa16.02■□□□□ 0.16
SHOX2-206ENST00000554685 E9PMD0 336 aa16.02■□□□□ 0.16
SHOX2-206ENST00000554685 LGR5O75473 907 aa16.02■□□□□ 0.16
SHOX2-206ENST00000554685 SSBP05455 408 aaKnown RBP eCLIP16.02■□□□□ 0.16
SHOX2-206ENST00000554685 STAT5BP51692 787 aa16.02■□□□□ 0.16
SHOX2-206ENST00000554685 ZNF445P59923 1031 aa16.02■□□□□ 0.16
SHOX2-206ENST00000554685 CAP1Q01518 475 aa16.02■□□□□ 0.16
SHOX2-206ENST00000554685 HSDL1Q3SXM5 330 aa16.02■□□□□ 0.16
SHOX2-206ENST00000554685 PRAMEF19Q5SWL8 479 aa16.02■□□□□ 0.16
SHOX2-206ENST00000554685 CNNM4Q6P4Q7 775 aa16.02■□□□□ 0.16
SHOX2-206ENST00000554685 PLPPR4Q7Z2D5 763 aa16.02■□□□□ 0.16
SHOX2-206ENST00000554685 KCNK18Q7Z418 384 aa16.02■□□□□ 0.16
SHOX2-206ENST00000554685 CCDC60Q8IWA6 550 aaPredicted RBP16.02■□□□□ 0.16
SHOX2-206ENST00000554685 CKAP2LQ8IYA6 745 aa16.02■□□□□ 0.16
SHOX2-206ENST00000554685 GSDMAQ96QA5 445 aa16.02■□□□□ 0.16
SHOX2-206ENST00000554685 C7orf25Q9BPX7 421 aa16.02■□□□□ 0.16
SHOX2-206ENST00000554685 AP5M1Q9H0R1 490 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms