RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 SEPT4O43236 478 aa5.92□□□□□ -1.46
ATXN3-229ENST00000554672 STRNO43815 780 aa5.92□□□□□ -1.46
ATXN3-229ENST00000554672 CNMDO75829 334 aa5.92□□□□□ -1.46
ATXN3-229ENST00000554672 BAG3O95817 575 aa5.92□□□□□ -1.46
ATXN3-229ENST00000554672 WNT11O96014 354 aa5.92□□□□□ -1.46
ATXN3-229ENST00000554672 ADH5P11766 374 aa5.92□□□□□ -1.46
ATXN3-229ENST00000554672 RAG1P15918 1043 aa5.92□□□□□ -1.46
ATXN3-229ENST00000554672 TAL1P17542 331 aaPredicted RBP5.92□□□□□ -1.46
ATXN3-229ENST00000554672 ADORA1P30542 326 aa5.92□□□□□ -1.46
ATXN3-229ENST00000554672 ADCYAP1R1P41586 468 aa5.92□□□□□ -1.46
ATXN3-229ENST00000554672 IRAK1P51617 712 aa5.92□□□□□ -1.46
ATXN3-229ENST00000554672 USP11P51784 963 aa5.92□□□□□ -1.46
ATXN3-229ENST00000554672 EPHB4P54760 987 aa5.92□□□□□ -1.46
ATXN3-229ENST00000554672 TIMM10P62072 90 aa5.92□□□□□ -1.46
ATXN3-229ENST00000554672 JAG1P78504 1218 aa5.92□□□□□ -1.46
ATXN3-229ENST00000554672 RASGRF1Q13972 1273 aa5.92□□□□□ -1.46
ATXN3-229ENST00000554672 GRB14Q14449 540 aa5.92□□□□□ -1.46
ATXN3-229ENST00000554672 POU4F3Q15319 338 aa5.92□□□□□ -1.46
ATXN3-229ENST00000554672 MSMPQ1L6U9 139 aa5.92□□□□□ -1.46
ATXN3-229ENST00000554672 OLFML2BQ68BL8 750 aa5.92□□□□□ -1.46
ATXN3-229ENST00000554672 NFXL1Q6ZNB6 911 aa5.92□□□□□ -1.46
ATXN3-229ENST00000554672 CATSPERGQ6ZRH7 1159 aa5.92□□□□□ -1.46
ATXN3-229ENST00000554672 DPP9Q86TI2 863 aa5.92□□□□□ -1.46
ATXN3-229ENST00000554672 METTL16Q86W50 562 aaKnown RBP5.92□□□□□ -1.46
ATXN3-229ENST00000554672 TEX11Q8IYF3 940 aa5.92□□□□□ -1.46
ATXN3-229ENST00000554672 TRPV1Q8NER1 839 aa5.92□□□□□ -1.46
ATXN3-229ENST00000554672 NPLOC4Q8TAT6 608 aa5.92□□□□□ -1.46
ATXN3-229ENST00000554672 PPM1EQ8WY54 764 aa5.92□□□□□ -1.46
ATXN3-229ENST00000554672 NSUN4Q96CB9 384 aaKnown RBP5.92□□□□□ -1.46
ATXN3-229ENST00000554672 TIFAQ96CG3 184 aa5.92□□□□□ -1.46
ATXN3-229ENST00000554672 UHRF1Q96T88 793 aaPredicted RBP5.92□□□□□ -1.46
ATXN3-229ENST00000554672 SIL1Q9H173 461 aa5.92□□□□□ -1.46
ATXN3-229ENST00000554672 SLC5A4Q9NY91 659 aa5.92□□□□□ -1.46
ATXN3-229ENST00000554672 THEGQ9P2T0 379 aa5.92□□□□□ -1.46
ATXN3-229ENST00000554672 HDAC5Q9UQL6 1122 aa5.92□□□□□ -1.46
ATXN3-229ENST00000554672 AKAP2Q9Y2D5 859 aa5.92□□□□□ -1.46
ATXN3-229ENST00000554672 ACTL7BQ9Y614 415 aa5.92□□□□□ -1.46
ATXN3-229ENST00000554672 VCANP13611 3396 aa5.92□□□□□ -1.46
ATXN3-229ENST00000554672 GPR182O15218 404 aa5.91□□□□□ -1.46
ATXN3-229ENST00000554672 B3GALT4O96024 378 aa5.91□□□□□ -1.46
ATXN3-229ENST00000554672 CLTBP09497 229 aa5.91□□□□□ -1.46
ATXN3-229ENST00000554672 CYBAP13498 195 aa5.91□□□□□ -1.46
ATXN3-229ENST00000554672 FOSL1P15407 271 aa5.91□□□□□ -1.46
ATXN3-229ENST00000554672 ITPKAP23677 461 aa5.91□□□□□ -1.46
ATXN3-229ENST00000554672 ITGB8P26012 769 aa5.91□□□□□ -1.46
ATXN3-229ENST00000554672 USP14P54578 494 aa5.91□□□□□ -1.46
ATXN3-229ENST00000554672 FPGSQ05932 587 aa5.91□□□□□ -1.46
ATXN3-229ENST00000554672 MVPQ14764 893 aaKnown RBP5.91□□□□□ -1.46
ATXN3-229ENST00000554672 LRRC41Q15345 812 aa5.91□□□□□ -1.46
ATXN3-229ENST00000554672 ATF7IPQ6VMQ6 1270 aa5.91□□□□□ -1.46
ATXN3-229ENST00000554672 LBX2Q6XYB7 198 aa5.91□□□□□ -1.46
ATXN3-229ENST00000554672 CRACR2BQ8N4Y2 399 aaPredicted RBP5.91□□□□□ -1.46
ATXN3-229ENST00000554672 ZNF384Q8TF68 577 aa5.91□□□□□ -1.46
ATXN3-229ENST00000554672 FERMT2Q96AC1 680 aa5.91□□□□□ -1.46
ATXN3-229ENST00000554672 C12orf42Q96LP6 360 aa5.91□□□□□ -1.46
ATXN3-229ENST00000554672 NOL10Q9BSC4 688 aaKnown RBP5.91□□□□□ -1.46
ATXN3-229ENST00000554672 NPHS2Q9NP85 383 aa5.91□□□□□ -1.46
ATXN3-229ENST00000554672 COPRSQ9NQ92 184 aa5.91□□□□□ -1.46
ATXN3-229ENST00000554672 TMEM39AQ9NV64 488 aa5.91□□□□□ -1.46
ATXN3-229ENST00000554672 HOXC10Q9NYD6 342 aa5.91□□□□□ -1.46
ATXN3-229ENST00000554672 RAI14Q9P0K7 980 aa5.91□□□□□ -1.46
ATXN3-229ENST00000554672 ZBTB21Q9ULJ3 1066 aa5.91□□□□□ -1.46
ATXN3-229ENST00000554672 PTPRCP08575 1304 aa5.91□□□□□ -1.46
ATXN3-229ENST00000554672 SYNGAP1Q96PV0 1343 aa5.91□□□□□ -1.46
ATXN3-229ENST00000554672 DCDC2CA8MYV0 355 aa5.9□□□□□ -1.46
ATXN3-229ENST00000554672 CPNE3O75131 537 aaKnown RBP5.9□□□□□ -1.46
ATXN3-229ENST00000554672 CYP11A1P05108 521 aa5.9□□□□□ -1.46
ATXN3-229ENST00000554672 NFICP08651 508 aa5.9□□□□□ -1.46
ATXN3-229ENST00000554672 PRAMEF19Q5SWL8 479 aa5.9□□□□□ -1.46
ATXN3-229ENST00000554672 ANO1Q5XXA6 986 aa5.9□□□□□ -1.46
ATXN3-229ENST00000554672 CCDC174Q6PII3 467 aa5.9□□□□□ -1.46
ATXN3-229ENST00000554672 PAOXQ6QHF9 649 aa5.9□□□□□ -1.46
ATXN3-229ENST00000554672 ZAR1Q86SH2 424 aa5.9□□□□□ -1.46
ATXN3-229ENST00000554672 RNF180Q86T96 592 aa5.9□□□□□ -1.46
ATXN3-229ENST00000554672 SPATA5Q8NB90 893 aa5.9□□□□□ -1.46
ATXN3-229ENST00000554672 SH3RF3Q8TEJ3 882 aaPredicted RBP5.9□□□□□ -1.46
ATXN3-229ENST00000554672 TOX2Q96NM4 488 aa5.9□□□□□ -1.46
ATXN3-229ENST00000554672 OSBPL1AQ9BXW6 950 aa5.9□□□□□ -1.46
ATXN3-229ENST00000554672 EHD4Q9H223 541 aa5.9□□□□□ -1.46
ATXN3-229ENST00000554672 GSX1Q9H4S2 264 aaPredicted RBP5.9□□□□□ -1.46
ATXN3-229ENST00000554672 ABCB6Q9NP58 842 aa5.9□□□□□ -1.46
ATXN3-229ENST00000554672 HMG20BQ9P0W2 317 aa5.9□□□□□ -1.46
ATXN3-229ENST00000554672 BTBD7Q9P203 1132 aa5.9□□□□□ -1.46
ATXN3-229ENST00000554672 LRP2BPQ9P2M1 347 aa5.9□□□□□ -1.46
ATXN3-229ENST00000554672 ADGRE2Q9UHX3 823 aa5.9□□□□□ -1.46
ATXN3-229ENST00000554672 NRBP1Q9UHY1 535 aa5.9□□□□□ -1.46
ATXN3-229ENST00000554672 TTC28Q96AY4 2481 aa5.9□□□□□ -1.47
ATXN3-229ENST00000554672 SPTBN5Q9NRC6 3674 aaKnown RBP5.89□□□□□ -1.47
ATXN3-229ENST00000554672 DDX60LQ5H9U9 1706 aaKnown RBP5.89□□□□□ -1.47
ATXN3-229ENST00000554672 A0A1B0GUL7 405 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 FAM170BA6NMN3 283 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 EIF1AYO14602 144 aaKnown RBP5.89□□□□□ -1.47
ATXN3-229ENST00000554672 DYNC1LI2O43237 492 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-229ENST00000554672 NDUFB5O43674 189 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 EIF4EBP3O60516 100 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-229ENST00000554672 PQBP1O60828 265 aaKnown RBP5.89□□□□□ -1.47
ATXN3-229ENST00000554672 IGSF3O75054 1194 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 TIMP1P01033 207 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 GH2P01242 217 aa5.89□□□□□ -1.47
ATXN3-229ENST00000554672 HLA-DOAP06340 250 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms