RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 MMGT1Q8N4V1 131 aa17.25■□□□□ 0.35
ARHGEF40-203ENST00000554514 DCAF4Q8WV16 495 aa17.25■□□□□ 0.35
ARHGEF40-203ENST00000554514 SPAG5Q96R06 1193 aa17.25■□□□□ 0.35
ARHGEF40-203ENST00000554514 NAP1L4Q99733 375 aaKnown RBP17.25■□□□□ 0.35
ARHGEF40-203ENST00000554514 TDRD3Q9H7E2 651 aaKnown RBP17.25■□□□□ 0.35
ARHGEF40-203ENST00000554514 MYO3BQ8WXR4 1341 aa17.25■□□□□ 0.35
ARHGEF40-203ENST00000554514 TULP1O00294 542 aaPredicted RBP17.24■□□□□ 0.35
ARHGEF40-203ENST00000554514 GNA14O95837 355 aa17.24■□□□□ 0.35
ARHGEF40-203ENST00000554514 MMP10P09238 476 aa17.24■□□□□ 0.35
ARHGEF40-203ENST00000554514 KCNA1Q09470 495 aa17.24■□□□□ 0.35
ARHGEF40-203ENST00000554514 ABCB5Q2M3G0 1257 aa17.24■□□□□ 0.35
ARHGEF40-203ENST00000554514 ERMNQ8TAM6 284 aa17.24■□□□□ 0.35
ARHGEF40-203ENST00000554514 ETNPPLQ8TBG4 499 aa17.24■□□□□ 0.35
ARHGEF40-203ENST00000554514 PIGOQ8TEQ8 1089 aa17.24■□□□□ 0.35
ARHGEF40-203ENST00000554514 VIPAS39Q9H9C1 493 aa17.24■□□□□ 0.35
ARHGEF40-203ENST00000554514 FAM184BQ9ULE4 1060 aa17.24■□□□□ 0.35
ARHGEF40-203ENST00000554514 ZSCAN5CA6NGD5 496 aaPredicted RBP17.24■□□□□ 0.35
ARHGEF40-203ENST00000554514 PJA2O43164 708 aa17.24■□□□□ 0.35
ARHGEF40-203ENST00000554514 GH2P01242 217 aa17.24■□□□□ 0.35
ARHGEF40-203ENST00000554514 JAG1P78504 1218 aa17.24■□□□□ 0.35
ARHGEF40-203ENST00000554514 COL23A1Q86Y22 540 aaPredicted RBP17.24■□□□□ 0.35
ARHGEF40-203ENST00000554514 MSL3Q8N5Y2 521 aaKnown RBP17.24■□□□□ 0.35
ARHGEF40-203ENST00000554514 ZDHHC15Q96MV8 337 aa17.24■□□□□ 0.35
ARHGEF40-203ENST00000554514 GCNT3O95395 438 aa17.24■□□□□ 0.35
ARHGEF40-203ENST00000554514 SPATA31C1P0DKV0 1188 aa17.24■□□□□ 0.35
ARHGEF40-203ENST00000554514 ALDH1B1P30837 517 aa17.24■□□□□ 0.35
ARHGEF40-203ENST00000554514 IFT81Q8WYA0 676 aa17.24■□□□□ 0.35
ARHGEF40-203ENST00000554514 RABEP2Q9H5N1 569 aa17.24■□□□□ 0.35
ARHGEF40-203ENST00000554514 ARMCX3Q9UH62 379 aaPredicted RBP17.24■□□□□ 0.35
ARHGEF40-203ENST00000554514 TRPC5Q9UL62 973 aaPredicted RBP17.24■□□□□ 0.35
ARHGEF40-203ENST00000554514 SPATA31A6Q5VVP1 1343 aa17.24■□□□□ 0.35
ARHGEF40-203ENST00000554514 AGPSO00116 658 aa17.23■□□□□ 0.35
ARHGEF40-203ENST00000554514 CASP4P49662 377 aa17.23■□□□□ 0.35
ARHGEF40-203ENST00000554514 SPIRE1Q08AE8 756 aa17.23■□□□□ 0.35
ARHGEF40-203ENST00000554514 CTTNQ14247 550 aaKnown RBP17.23■□□□□ 0.35
ARHGEF40-203ENST00000554514 DNAJC21Q5F1R6 531 aaKnown RBP17.23■□□□□ 0.35
ARHGEF40-203ENST00000554514 AENQ8WTP8 325 aaKnown RBP17.23■□□□□ 0.35
ARHGEF40-203ENST00000554514 RUSC1Q9BVN2 902 aa17.23■□□□□ 0.35
ARHGEF40-203ENST00000554514 EDEM3Q9BZQ6 932 aa17.23■□□□□ 0.35
ARHGEF40-203ENST00000554514 EHD4Q9H223 541 aa17.23■□□□□ 0.35
ARHGEF40-203ENST00000554514 QTRT2Q9H974 415 aaKnown RBP17.23■□□□□ 0.35
ARHGEF40-203ENST00000554514 NYAP2Q9P242 653 aa17.23■□□□□ 0.35
ARHGEF40-203ENST00000554514 LCMT1Q9UIC8 334 aa17.23■□□□□ 0.35
ARHGEF40-203ENST00000554514 ZC3H4Q9UPT8 1303 aaKnown RBP17.23■□□□□ 0.35
ARHGEF40-203ENST00000554514 LTBP1Q14766 1721 aa17.23■□□□□ 0.35
ARHGEF40-203ENST00000554514 AARSP49588 968 aaKnown RBP eCLIP17.23■□□□□ 0.35
ARHGEF40-203ENST00000554514 SLC18A3Q16572 532 aa17.23■□□□□ 0.35
ARHGEF40-203ENST00000554514 SYDE2Q5VT97 1194 aa17.23■□□□□ 0.35
ARHGEF40-203ENST00000554514 GLT8D2Q9H1C3 349 aa17.23■□□□□ 0.35
ARHGEF40-203ENST00000554514 STIM2Q9P246 746 aa17.23■□□□□ 0.35
ARHGEF40-203ENST00000554514 PCDHB13Q9Y5F0 798 aa17.23■□□□□ 0.35
ARHGEF40-203ENST00000554514 MSH4O15457 936 aa17.22■□□□□ 0.35
ARHGEF40-203ENST00000554514 ECE2O60344 883 aa17.22■□□□□ 0.35
ARHGEF40-203ENST00000554514 NOP2P46087 812 aaKnown RBP17.22■□□□□ 0.35
ARHGEF40-203ENST00000554514 PTK2Q05397 1052 aa17.22■□□□□ 0.35
ARHGEF40-203ENST00000554514 CFAP221Q4G0U5 840 aa17.22■□□□□ 0.35
ARHGEF40-203ENST00000554514 GJB7Q6PEY0 223 aa17.22■□□□□ 0.35
ARHGEF40-203ENST00000554514 KSR1Q8IVT5 923 aa17.22■□□□□ 0.35
ARHGEF40-203ENST00000554514 NUCKS1Q9H1E3 243 aaKnown RBP17.22■□□□□ 0.35
ARHGEF40-203ENST00000554514 GANQ9H2C0 597 aa17.22■□□□□ 0.35
ARHGEF40-203ENST00000554514 LUC7LQ9NQ29 371 aaKnown RBP17.22■□□□□ 0.35
ARHGEF40-203ENST00000554514 CWC15Q9P013 229 aaKnown RBP17.22■□□□□ 0.35
ARHGEF40-203ENST00000554514 EML1O00423 815 aa17.22■□□□□ 0.35
ARHGEF40-203ENST00000554514 ZBTB39O15060 712 aa17.22■□□□□ 0.35
ARHGEF40-203ENST00000554514 HOXD13P35453 343 aa17.22■□□□□ 0.35
ARHGEF40-203ENST00000554514 AP3B2Q13367 1082 aa17.22■□□□□ 0.35
ARHGEF40-203ENST00000554514 KNOP1Q1ED39 458 aaKnown RBP17.22■□□□□ 0.35
ARHGEF40-203ENST00000554514 LENG9Q96B70 501 aa17.22■□□□□ 0.35
ARHGEF40-203ENST00000554514 CYP3A7-CYP3A51PA0A087WV96 503 aa17.21■□□□□ 0.35
ARHGEF40-203ENST00000554514 TBCAO75347 108 aaKnown RBP17.21■□□□□ 0.35
ARHGEF40-203ENST00000554514 AKAP3O75969 853 aa17.21■□□□□ 0.35
ARHGEF40-203ENST00000554514 CFBP00751 764 aa17.21■□□□□ 0.35
ARHGEF40-203ENST00000554514 PRLRP16471 622 aa17.21■□□□□ 0.35
ARHGEF40-203ENST00000554514 CYP3A7P24462 503 aa17.21■□□□□ 0.35
ARHGEF40-203ENST00000554514 MUM1L1Q5H9M0 696 aa17.21■□□□□ 0.35
ARHGEF40-203ENST00000554514 TPH2Q8IWU9 490 aa17.21■□□□□ 0.35
ARHGEF40-203ENST00000554514 PROCA1Q8NCQ7 364 aaPredicted RBP17.21■□□□□ 0.35
ARHGEF40-203ENST00000554514 MKL1Q969V6 931 aa17.21■□□□□ 0.35
ARHGEF40-203ENST00000554514 KRT12Q99456 494 aa17.21■□□□□ 0.35
ARHGEF40-203ENST00000554514 ANKRD65E5RJM6 399 aa17.21■□□□□ 0.35
ARHGEF40-203ENST00000554514 BMP3P12645 472 aa17.21■□□□□ 0.35
ARHGEF40-203ENST00000554514 XRCC5P13010 732 aaKnown RBP17.21■□□□□ 0.35
ARHGEF40-203ENST00000554514 RPA1P27694 616 aa17.21■□□□□ 0.35
ARHGEF40-203ENST00000554514 IRX5P78411 483 aaPredicted RBP17.21■□□□□ 0.35
ARHGEF40-203ENST00000554514 NAB2Q15742 525 aa17.21■□□□□ 0.35
ARHGEF40-203ENST00000554514 ZYXQ15942 572 aaKnown RBP17.21■□□□□ 0.35
ARHGEF40-203ENST00000554514 TTC19Q6DKK2 380 aaPredicted RBP17.21■□□□□ 0.35
ARHGEF40-203ENST00000554514 CCDC174Q6PII3 467 aa17.21■□□□□ 0.35
ARHGEF40-203ENST00000554514 TMEM179Q6ZVK1 233 aa17.21■□□□□ 0.35
ARHGEF40-203ENST00000554514 RNF10Q8N5U6 811 aaKnown RBP17.21■□□□□ 0.35
ARHGEF40-203ENST00000554514 TSEN2Q8NCE0 465 aaKnown RBP17.21■□□□□ 0.35
ARHGEF40-203ENST00000554514 RSPH14Q9UHP6 348 aa17.21■□□□□ 0.35
ARHGEF40-203ENST00000554514 GOLGA6CA6NDK9 693 aa17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 AFPP02771 609 aaKnown RBP17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 GOLGA6DP0CG33 693 aa17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 POLD1P28340 1107 aa17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 PDE6BP35913 854 aa17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 GUCY2DQ02846 1103 aa17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 RRP1BQ14684 758 aaKnown RBP17.2■□□□□ 0.34
ARHGEF40-203ENST00000554514 EXOC3L4Q17RC7 722 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms