RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 KATNA1O75449 491 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 HOXC6P09630 235 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 IDEP14735 1019 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 ST13P50502 369 aaKnown RBP3.07□□□□□ -1.92
PRPF39-206ENST00000554429 SERINC3Q13530 473 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 SNX17Q15036 470 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 LRRC24Q50LG9 513 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 METTL24Q5JXM2 366 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 WDR45BQ5MNZ6 344 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 CPLX2Q6PUV4 134 aaKnown RBP3.07□□□□□ -1.92
PRPF39-206ENST00000554429 CCBE1Q6UXH8 406 aaPredicted RBP3.07□□□□□ -1.92
PRPF39-206ENST00000554429 BTN2A1Q7KYR7 527 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 OTUD6AQ7L8S5 288 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 NECAB2Q7Z6G3 386 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 BRSK2Q8IWQ3 736 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 ERCC4Q92889 916 aaPredicted RBP3.07□□□□□ -1.92
PRPF39-206ENST00000554429 ZKSCAN4Q969J2 545 aaPredicted RBP3.07□□□□□ -1.92
PRPF39-206ENST00000554429 CRBNQ96SW2 442 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 KRTAP4-11Q9BYQ6 195 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 GPCPD1Q9NPB8 672 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 GPR108Q9NPR9 543 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 SNTG2Q9NY99 539 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 HOXC10Q9NYD6 342 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 SCHIP1Q9P0W5 487 aaPredicted RBP3.07□□□□□ -1.92
PRPF39-206ENST00000554429 GTF3C4Q9UKN8 822 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 GABRQQ9UN88 632 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 FAM50BQ9Y247 325 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 DDX49Q9Y6V7 483 aaKnown RBP3.07□□□□□ -1.92
PRPF39-206ENST00000554429 ZNFX1Q9P2E3 1918 aaKnown RBP3.07□□□□□ -1.92
PRPF39-206ENST00000554429 TRIM64A6NGJ6 449 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 TRIM64BA6NI03 449 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 RTCAO00442 366 aaKnown RBP3.06□□□□□ -1.92
PRPF39-206ENST00000554429 SOX1O00570 391 aaPredicted RBP3.06□□□□□ -1.92
PRPF39-206ENST00000554429 PGRP06401 933 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 LDHBP07195 334 aaKnown RBP3.06□□□□□ -1.92
PRPF39-206ENST00000554429 MMEP08473 750 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 MTHFD1P11586 935 aaKnown RBP3.06□□□□□ -1.92
PRPF39-206ENST00000554429 VARSP26640 1264 aaKnown RBP3.06□□□□□ -1.92
PRPF39-206ENST00000554429 RENBPP51606 427 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 GSTO1P78417 241 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 FZD5Q13467 585 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 HIC1Q14526 733 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 NFKBIBQ15653 356 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 ECM1Q16610 540 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 ZC3H12BQ5HYM0 836 aaKnown RBP3.06□□□□□ -1.92
PRPF39-206ENST00000554429 HYIQ5T013 277 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 CFAP58Q5T655 872 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 LILRB2Q8N423 598 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.06□□□□□ -1.92
PRPF39-206ENST00000554429 GSDMBQ8TAX9 411 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 C17orf50Q8WW18 174 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 COA7Q96BR5 231 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 TRMT2BQ96GJ1 504 aaKnown RBP3.06□□□□□ -1.92
PRPF39-206ENST00000554429 FAM81BQ96LP2 452 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 UROC1Q96N76 676 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 KIF2CQ99661 725 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 C11orf49Q9H6J7 331 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 KCTD5Q9NXV2 234 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 CEP72Q9P209 647 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 CPA4Q9UI42 421 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 CEP131Q9UPN4 1083 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 F6X3S4 739 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 TOR1BO14657 336 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 TIPRLO75663 272 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 BMP1P13497 986 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 MAPK4P31152 587 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 MAPK8P45983 427 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 FLT3LGP49771 235 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 NFIAQ12857 509 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 KIAA0100Q14667 2235 aaKnown RBP3.06□□□□□ -1.92
PRPF39-206ENST00000554429 C6orf118Q5T5N4 469 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 FAM180BQ6P0A1 224 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 DDX42Q86XP3 938 aaKnown RBP eCLIP3.06□□□□□ -1.92
PRPF39-206ENST00000554429 TDHQ8IZJ6 230 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 AGAP3Q96P47 875 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 RNF208Q9H0X6 261 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 EHD4Q9H223 541 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 RPAP3Q9H6T3 665 aaPredicted RBP3.06□□□□□ -1.92
PRPF39-206ENST00000554429 PICK1Q9NRD5 415 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 USP40Q9NVE5 1235 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 IRAK4Q9NWZ3 460 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 MTMR10Q9NXD2 777 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 DCTN4Q9UJW0 460 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 AKAP10O43572 662 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 SORBS3O60504 671 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 MSCO60682 206 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 B3GALNT1O75752 331 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 F2P00734 622 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 FURINP09958 794 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 NEFHP12036 1026 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 CA8P35219 290 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 CAP2P40123 477 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 PRPHP41219 470 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 PLA2G4AP47712 749 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 NKX3-2P78367 333 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 SMAD3P84022 425 aaKnown RBP3.06□□□□□ -1.92
PRPF39-206ENST00000554429 SRSF11Q05519 484 aaKnown RBP3.06□□□□□ -1.92
PRPF39-206ENST00000554429 ATP2B3Q16720 1220 aa3.06□□□□□ -1.92
PRPF39-206ENST00000554429 SHROOM1Q2M3G4 852 aaPredicted RBP3.06□□□□□ -1.92
PRPF39-206ENST00000554429 OLFML2BQ68BL8 750 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms