RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 IGHMBP2P38935 993 aaKnown RBP7.19□□□□□ -1.26
ATXN3-226ENST00000554350 CACNB2Q08289 660 aaPredicted RBP7.19□□□□□ -1.26
ATXN3-226ENST00000554350 ZNF124Q15973 351 aa7.19□□□□□ -1.26
ATXN3-226ENST00000554350 SLC23A3Q6PIS1 610 aa7.19□□□□□ -1.26
ATXN3-226ENST00000554350 FBF1Q8TES7 1133 aa7.19□□□□□ -1.26
ATXN3-226ENST00000554350 CFAP53Q96M91 514 aa7.19□□□□□ -1.26
ATXN3-226ENST00000554350 PI4K2BG5E9Z4 385 aa7.18□□□□□ -1.26
ATXN3-226ENST00000554350 RBAK-RBAKDNI3L0D1 243 aa7.18□□□□□ -1.26
ATXN3-226ENST00000554350 FANCGO15287 622 aa7.18□□□□□ -1.26
ATXN3-226ENST00000554350 CELA3AP09093 270 aa7.18□□□□□ -1.26
ATXN3-226ENST00000554350 PTPN11Q06124 597 aaPredicted RBP7.18□□□□□ -1.26
ATXN3-226ENST00000554350 ZNF804AQ7Z570 1209 aa7.18□□□□□ -1.26
ATXN3-226ENST00000554350 CEP44Q9C0F1 390 aa7.18□□□□□ -1.26
ATXN3-226ENST00000554350 SRCIN1Q9C0H9 1055 aa7.18□□□□□ -1.26
ATXN3-226ENST00000554350 ANKRD2Q9GZV1 360 aa7.18□□□□□ -1.26
ATXN3-226ENST00000554350 CHPF2Q9P2E5 772 aa7.18□□□□□ -1.26
ATXN3-226ENST00000554350 GRXCR1A8MXD5 290 aa7.17□□□□□ -1.26
ATXN3-226ENST00000554350 CXCL11O14625 94 aa7.17□□□□□ -1.26
ATXN3-226ENST00000554350 CNGA1P29973 690 aa7.17□□□□□ -1.26
ATXN3-226ENST00000554350 CRKP46108 304 aa7.17□□□□□ -1.26
ATXN3-226ENST00000554350 EPHB4P54760 987 aa7.17□□□□□ -1.26
ATXN3-226ENST00000554350 CTSWP56202 376 aa7.17□□□□□ -1.26
ATXN3-226ENST00000554350 FPGSQ05932 587 aa7.17□□□□□ -1.26
ATXN3-226ENST00000554350 INPP5AQ14642 412 aa7.17□□□□□ -1.26
ATXN3-226ENST00000554350 FAM110CQ1W6H9 321 aa7.17□□□□□ -1.26
ATXN3-226ENST00000554350 TRIM60Q495X7 471 aa7.17□□□□□ -1.26
ATXN3-226ENST00000554350 MFSD14BQ5SR56 506 aa7.17□□□□□ -1.26
ATXN3-226ENST00000554350 LCE4AQ5TA78 99 aa7.17□□□□□ -1.26
ATXN3-226ENST00000554350 MAP3K21Q5TCX8 1036 aa7.17□□□□□ -1.26
ATXN3-226ENST00000554350 LLGL2Q6P1M3 1020 aa7.17□□□□□ -1.26
ATXN3-226ENST00000554350 TMEM40Q8WWA1 233 aa7.17□□□□□ -1.26
ATXN3-226ENST00000554350 MPHOSPH8Q99549 860 aa7.17□□□□□ -1.26
ATXN3-226ENST00000554350 GREM2Q9H772 168 aa7.17□□□□□ -1.26
ATXN3-226ENST00000554350 PDLIM7Q9NR12 457 aa7.17□□□□□ -1.26
ATXN3-226ENST00000554350 PICK1Q9NRD5 415 aa7.17□□□□□ -1.26
ATXN3-226ENST00000554350 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.17□□□□□ -1.26
ATXN3-226ENST00000554350 GTF2IRD1Q9UHL9 959 aa7.17□□□□□ -1.26
ATXN3-226ENST00000554350 ZHX2Q9Y6X8 837 aa7.17□□□□□ -1.26
ATXN3-226ENST00000554350 AK9Q5TCS8 1911 aa7.17□□□□□ -1.26
ATXN3-226ENST00000554350 CACNA1BQ00975 2339 aa7.16□□□□□ -1.26
ATXN3-226ENST00000554350 TRIM43BA6NCK2 446 aa7.16□□□□□ -1.26
ATXN3-226ENST00000554350 SNAP23O00161 211 aa7.16□□□□□ -1.26
ATXN3-226ENST00000554350 ERC2O15083 957 aa7.16□□□□□ -1.26
ATXN3-226ENST00000554350 ANP32CO43423 234 aa7.16□□□□□ -1.26
ATXN3-226ENST00000554350 KRT37O76014 449 aa7.16□□□□□ -1.26
ATXN3-226ENST00000554350 PCCAP05165 728 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-226ENST00000554350 RAG1P15918 1043 aa7.16□□□□□ -1.26
ATXN3-226ENST00000554350 MAPK8P45983 427 aa7.16□□□□□ -1.26
ATXN3-226ENST00000554350 FKBP1AP62942 108 aaKnown RBP7.16□□□□□ -1.26
ATXN3-226ENST00000554350 MESP2Q0VG99 397 aa7.16□□□□□ -1.26
ATXN3-226ENST00000554350 SCARA3Q6AZY7 606 aa7.16□□□□□ -1.26
ATXN3-226ENST00000554350 LRFN4Q6PJG9 635 aa7.16□□□□□ -1.26
ATXN3-226ENST00000554350 ARMCX6Q7L4S7 300 aa7.16□□□□□ -1.26
ATXN3-226ENST00000554350 GAL3ST3Q96A11 431 aa7.16□□□□□ -1.26
ATXN3-226ENST00000554350 TRIM43Q96BQ3 446 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-226ENST00000554350 MYD88Q99836 296 aa7.16□□□□□ -1.26
ATXN3-226ENST00000554350 KCNH6Q9H252 994 aa7.16□□□□□ -1.26
ATXN3-226ENST00000554350 FBRSQ9HAH7 460 aa7.16□□□□□ -1.26
ATXN3-226ENST00000554350 CWC22Q9HCG8 908 aaKnown RBP7.16□□□□□ -1.26
ATXN3-226ENST00000554350 MSRAQ9UJ68 235 aa7.16□□□□□ -1.26
ATXN3-226ENST00000554350 GJD2Q9UKL4 321 aa7.16□□□□□ -1.26
ATXN3-226ENST00000554350 PCDHA4Q9UN74 947 aa7.16□□□□□ -1.26
ATXN3-226ENST00000554350 SLC45A1Q9Y2W3 748 aa7.16□□□□□ -1.26
ATXN3-226ENST00000554350 LRRC37A2A6NM11 1700 aa7.15□□□□□ -1.26
ATXN3-226ENST00000554350 A0A0G2JLL6 359 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-226ENST00000554350 ZNF503-AS2A6NEH8 195 aa7.15□□□□□ -1.26
ATXN3-226ENST00000554350 TRIM75PA6NK02 468 aa7.15□□□□□ -1.26
ATXN3-226ENST00000554350 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-226ENST00000554350 KBTBD13C9JR72 458 aa7.15□□□□□ -1.26
ATXN3-226ENST00000554350 DNM1LO00429 736 aa7.15□□□□□ -1.26
ATXN3-226ENST00000554350 SLITRK5O94991 958 aa7.15□□□□□ -1.26
ATXN3-226ENST00000554350 DDX10Q13206 875 aaKnown RBP7.15□□□□□ -1.26
ATXN3-226ENST00000554350 GJC2Q5T442 439 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-226ENST00000554350 PCNX4Q63HM2 1172 aa7.15□□□□□ -1.26
ATXN3-226ENST00000554350 SLC39A5Q6ZMH5 540 aa7.15□□□□□ -1.26
ATXN3-226ENST00000554350 CYFIP1Q7L576 1253 aa7.15□□□□□ -1.26
ATXN3-226ENST00000554350 PRRT2Q7Z6L0 340 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-226ENST00000554350 CCAR1Q8IX12 1150 aaKnown RBP7.15□□□□□ -1.26
ATXN3-226ENST00000554350 ASB11Q8WXH4 323 aa7.15□□□□□ -1.26
ATXN3-226ENST00000554350 ASB16Q96NS5 453 aa7.15□□□□□ -1.26
ATXN3-226ENST00000554350 NKX2-4Q9H2Z4 354 aa7.15□□□□□ -1.26
ATXN3-226ENST00000554350 SLC28A3Q9HAS3 691 aa7.15□□□□□ -1.26
ATXN3-226ENST00000554350 CWC25Q9NXE8 425 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-226ENST00000554350 PLXNA1Q9UIW2 1896 aa7.15□□□□□ -1.27
ATXN3-226ENST00000554350 TAF5LO75529 589 aa7.14□□□□□ -1.27
ATXN3-226ENST00000554350 IL1R1P14778 569 aa7.14□□□□□ -1.27
ATXN3-226ENST00000554350 ZP2Q05996 745 aa7.14□□□□□ -1.27
ATXN3-226ENST00000554350 CHRNDQ07001 517 aa7.14□□□□□ -1.27
ATXN3-226ENST00000554350 TCP10Q12799 353 aa7.14□□□□□ -1.27
ATXN3-226ENST00000554350 IKZF1Q13422 519 aa7.14□□□□□ -1.27
ATXN3-226ENST00000554350 SLBPQ14493 270 aaKnown RBP eCLIP7.14□□□□□ -1.27
ATXN3-226ENST00000554350 CCL14Q16627 93 aa7.14□□□□□ -1.27
ATXN3-226ENST00000554350 NOL9Q5SY16 702 aaKnown RBP7.14□□□□□ -1.27
ATXN3-226ENST00000554350 CCDC191Q8NCU4 936 aa7.14□□□□□ -1.27
ATXN3-226ENST00000554350 TTLL11Q8NHH1 800 aa7.14□□□□□ -1.27
ATXN3-226ENST00000554350 SOCS4Q8WXH5 440 aa7.14□□□□□ -1.27
ATXN3-226ENST00000554350 HERVK_113Q902F9 699 aa7.14□□□□□ -1.27
ATXN3-226ENST00000554350 FERMT2Q96AC1 680 aa7.14□□□□□ -1.27
ATXN3-226ENST00000554350 RPAP1Q9BWH6 1393 aaPredicted RBP7.14□□□□□ -1.27
ATXN3-226ENST00000554350 SEMA3GQ9NS98 782 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms