RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 SEC24BO95487 1268 aa8.9□□□□□ -0.98
ABCD4-220ENST00000553998 CTSHP09668 335 aa8.9□□□□□ -0.98
ABCD4-220ENST00000553998 MYCLP12524 364 aaPredicted RBP8.9□□□□□ -0.98
ABCD4-220ENST00000553998 DNAJB1P25685 340 aa8.9□□□□□ -0.98
ABCD4-220ENST00000553998 AVPR2P30518 371 aa8.9□□□□□ -0.98
ABCD4-220ENST00000553998 MCM5P33992 734 aa8.9□□□□□ -0.98
ABCD4-220ENST00000553998 LPIN1Q14693 890 aa8.9□□□□□ -0.98
ABCD4-220ENST00000553998 METTL7BQ6UX53 244 aa8.9□□□□□ -0.98
ABCD4-220ENST00000553998 FAM43BQ6ZT52 329 aaPredicted RBP8.9□□□□□ -0.98
ABCD4-220ENST00000553998 DHX32Q7L7V1 743 aaKnown RBP8.9□□□□□ -0.98
ABCD4-220ENST00000553998 TMTC2Q8N394 836 aa8.9□□□□□ -0.98
ABCD4-220ENST00000553998 SUSD6Q92537 303 aa8.9□□□□□ -0.98
ABCD4-220ENST00000553998 GPKOWQ92917 476 aaPredicted RBP eCLIP8.9□□□□□ -0.982e-6■■■■■ 39.1
ABCD4-220ENST00000553998 TMEM87BQ96K49 555 aa8.9□□□□□ -0.98
ABCD4-220ENST00000553998 INPP4AQ96PE3 977 aaPredicted RBP8.9□□□□□ -0.98
ABCD4-220ENST00000553998 GPR20Q99678 358 aa8.9□□□□□ -0.98
ABCD4-220ENST00000553998 BACH2Q9BYV9 841 aa8.9□□□□□ -0.98
ABCD4-220ENST00000553998 IGFLR1Q9H665 355 aa8.9□□□□□ -0.98
ABCD4-220ENST00000553998 SETD4Q9NVD3 440 aa8.9□□□□□ -0.98
ABCD4-220ENST00000553998 SQORQ9Y6N5 450 aa8.9□□□□□ -0.98
ABCD4-220ENST00000553998 DCHS1Q96JQ0 3298 aa8.9□□□□□ -0.98
ABCD4-220ENST00000553998 MYH7BA7E2Y1 1941 aa8.9□□□□□ -0.99
ABCD4-220ENST00000553998 FRMPD4Q14CM0 1322 aa8.89□□□□□ -0.99
ABCD4-220ENST00000553998 MICAL3Q7RTP6 2002 aa8.89□□□□□ -0.99
ABCD4-220ENST00000553998 SPATA31C2B4DYI2 1134 aa8.89□□□□□ -0.99
ABCD4-220ENST00000553998 IFIT3O14879 490 aaKnown RBP8.89□□□□□ -0.99
ABCD4-220ENST00000553998 ZBTB5O15062 677 aa8.89□□□□□ -0.99
ABCD4-220ENST00000553998 PPP1R11O60927 126 aaPredicted RBP8.89□□□□□ -0.99
ABCD4-220ENST00000553998 GLP2RO95838 553 aa8.89□□□□□ -0.99
ABCD4-220ENST00000553998 ITGB1P05556 798 aa8.89□□□□□ -0.99
ABCD4-220ENST00000553998 PARP1P09874 1014 aaKnown RBP8.89□□□□□ -0.99
ABCD4-220ENST00000553998 CCND2P30279 289 aa8.89□□□□□ -0.99
ABCD4-220ENST00000553998 LIFRP42702 1097 aa8.89□□□□□ -0.99
ABCD4-220ENST00000553998 NDUFV1P49821 464 aa8.89□□□□□ -0.99
ABCD4-220ENST00000553998 VCPP55072 806 aaKnown RBP8.89□□□□□ -0.99
ABCD4-220ENST00000553998 ANTXR2P58335 489 aa8.89□□□□□ -0.99
ABCD4-220ENST00000553998 MRPS9P82933 396 aaKnown RBP8.89□□□□□ -0.99
ABCD4-220ENST00000553998 BTG3Q14201 252 aaPredicted RBP8.89□□□□□ -0.99
ABCD4-220ENST00000553998 NEDD9Q14511 834 aa8.89□□□□□ -0.99
ABCD4-220ENST00000553998 SEC23AQ15436 765 aa8.89□□□□□ -0.99
ABCD4-220ENST00000553998 ADCK5Q3MIX3 580 aa8.89□□□□□ -0.99
ABCD4-220ENST00000553998 TAF2Q6P1X5 1199 aa8.89□□□□□ -0.99
ABCD4-220ENST00000553998 BLOC1S2Q6QNY1 142 aa8.89□□□□□ -0.99
ABCD4-220ENST00000553998 CYB5R4Q7L1T6 521 aa8.89□□□□□ -0.99
ABCD4-220ENST00000553998 ADGRD2Q7Z7M1 963 aa8.89□□□□□ -0.99
ABCD4-220ENST00000553998 RTN4RL1Q86UN2 441 aaPredicted RBP8.89□□□□□ -0.99
ABCD4-220ENST00000553998 CMTR2Q8IYT2 770 aaKnown RBP8.89□□□□□ -0.99
ABCD4-220ENST00000553998 FBXL16Q8N461 479 aa8.89□□□□□ -0.99
ABCD4-220ENST00000553998 ENAHQ8N8S7 591 aaPredicted RBP8.89□□□□□ -0.99
ABCD4-220ENST00000553998 IL31RAQ8NI17 732 aa8.89□□□□□ -0.99
ABCD4-220ENST00000553998 ATP8B4Q8TF62 1192 aa8.89□□□□□ -0.99
ABCD4-220ENST00000553998 LMBR1Q8WVP7 490 aa8.89□□□□□ -0.99
ABCD4-220ENST00000553998 JAKMIP1Q96N16 626 aaKnown RBP8.89□□□□□ -0.99
ABCD4-220ENST00000553998 SENP7Q9BQF6 1050 aa8.89□□□□□ -0.99
ABCD4-220ENST00000553998 ZKSCAN3Q9BRR0 538 aa8.89□□□□□ -0.99
ABCD4-220ENST00000553998 KAT14Q9H8E8 782 aa8.89□□□□□ -0.99
ABCD4-220ENST00000553998 USP15Q9Y4E8 981 aaPredicted RBP8.89□□□□□ -0.99
ABCD4-220ENST00000553998 ZDBF2Q9HCK1 2354 aa8.88□□□□□ -0.99
ABCD4-220ENST00000553998 MBLAC1A4D2B0 266 aaPredicted RBP8.88□□□□□ -0.99
ABCD4-220ENST00000553998 PRC1O43663 620 aa8.88□□□□□ -0.99
ABCD4-220ENST00000553998 GHRP10912 638 aa8.88□□□□□ -0.99
ABCD4-220ENST00000553998 RBM25P49756 843 aaKnown RBP8.88□□□□□ -0.99
ABCD4-220ENST00000553998 EXOSC10Q01780 885 aaKnown RBP8.88□□□□□ -0.99
ABCD4-220ENST00000553998 TRAF1Q13077 416 aa8.88□□□□□ -0.99
ABCD4-220ENST00000553998 SEMA3FQ13275 785 aa8.88□□□□□ -0.99
ABCD4-220ENST00000553998 KCNC3Q14003 757 aa8.88□□□□□ -0.99
ABCD4-220ENST00000553998 GNPTABQ3T906 1256 aa8.88□□□□□ -0.99
ABCD4-220ENST00000553998 FBXO47Q5MNV8 452 aa8.88□□□□□ -0.99
ABCD4-220ENST00000553998 IFIT1BQ5T764 474 aaKnown RBP8.88□□□□□ -0.99
ABCD4-220ENST00000553998 TMEM184AQ6ZMB5 413 aa8.88□□□□□ -0.99
ABCD4-220ENST00000553998 KLHL23Q8NBE8 558 aa8.88□□□□□ -0.99
ABCD4-220ENST00000553998 IGDCC4Q8TDY8 1250 aa8.88□□□□□ -0.99
ABCD4-220ENST00000553998 LINC01599Q8WXQ3 324 aa8.88□□□□□ -0.99
ABCD4-220ENST00000553998 ATOH1Q92858 354 aaPredicted RBP8.88□□□□□ -0.99
ABCD4-220ENST00000553998 C22orf23Q9BZE7 217 aa8.88□□□□□ -0.99
ABCD4-220ENST00000553998 ZSWIM6Q9HCJ5 1215 aa8.88□□□□□ -0.99
ABCD4-220ENST00000553998 VAT1LQ9HCJ6 419 aa8.88□□□□□ -0.99
ABCD4-220ENST00000553998 PCDHA1Q9Y5I3 950 aa8.88□□□□□ -0.99
ABCD4-220ENST00000553998 MRPL42Q9Y6G3 142 aaKnown RBP8.88□□□□□ -0.99
ABCD4-220ENST00000553998 MYO7AQ13402 2215 aa8.88□□□□□ -0.99
ABCD4-220ENST00000553998 BAZ2BQ9UIF8 2168 aaKnown RBP8.88□□□□□ -0.99
ABCD4-220ENST00000553998 DNAH14Q0VDD8 3507 aa8.87□□□□□ -0.99
ABCD4-220ENST00000553998 FSD2A1L4K1 749 aa8.87□□□□□ -0.99
ABCD4-220ENST00000553998 PALM3A6NDB9 673 aaPredicted RBP8.87□□□□□ -0.99
ABCD4-220ENST00000553998 GCOM1H8Y6P7 765 aaPredicted RBP8.87□□□□□ -0.99
ABCD4-220ENST00000553998 NOP56O00567 594 aaKnown RBP8.87□□□□□ -0.99
ABCD4-220ENST00000553998 SH2B2O14492 632 aaPredicted RBP8.87□□□□□ -0.99
ABCD4-220ENST00000553998 GALR2O43603 387 aaPredicted RBP8.87□□□□□ -0.99
ABCD4-220ENST00000553998 SORBS3O60504 671 aa8.87□□□□□ -0.99
ABCD4-220ENST00000553998 RPLP2P05387 115 aaKnown RBP8.87□□□□□ -0.99
ABCD4-220ENST00000553998 POLR2MP0CAP2 368 aa8.87□□□□□ -0.99
ABCD4-220ENST00000553998 RPS6KB1P23443 525 aa8.87□□□□□ -0.99
ABCD4-220ENST00000553998 HOXA13P31271 388 aaPredicted RBP8.87□□□□□ -0.99
ABCD4-220ENST00000553998 NBL1P41271 181 aa8.87□□□□□ -0.99
ABCD4-220ENST00000553998 NRIP1P48552 1158 aa8.87□□□□□ -0.99
ABCD4-220ENST00000553998 ARHGAP4P98171 946 aa8.87□□□□□ -0.99
ABCD4-220ENST00000553998 UBE3AQ05086 875 aa8.87□□□□□ -0.99
ABCD4-220ENST00000553998 WTAPQ15007 396 aa8.87□□□□□ -0.99
ABCD4-220ENST00000553998 PTPN21Q16825 1174 aa8.87□□□□□ -0.99
ABCD4-220ENST00000553998 MARCH8Q5T0T0 291 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms