RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 CFHR4Q92496 578 aa4.06□□□□□ -1.76
SRP54-204ENST00000553923 LARP4BQ92615 738 aaKnown RBP4.06□□□□□ -1.76
SRP54-204ENST00000553923 DPYSL5Q9BPU6 564 aa4.06□□□□□ -1.76
SRP54-204ENST00000553923 TACO1Q9BSH4 297 aaKnown RBP4.06□□□□□ -1.76
SRP54-204ENST00000553923 SMAD7O15105 426 aaKnown RBP4.05□□□□□ -1.76
SRP54-204ENST00000553923 DLX3O60479 287 aa4.05□□□□□ -1.76
SRP54-204ENST00000553923 ZNF627Q7L945 461 aa4.05□□□□□ -1.76
SRP54-204ENST00000553923 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.05□□□□□ -1.76
SRP54-204ENST00000553923 ZNF808Q8N4W9 903 aaPredicted RBP4.05□□□□□ -1.76
SRP54-204ENST00000553923 PLEKHG4BQ96PX9 1271 aa4.05□□□□□ -1.76
SRP54-204ENST00000553923 AGAP2Q99490 1192 aa4.05□□□□□ -1.76
SRP54-204ENST00000553923 PLA2G12BQ9BX93 195 aa4.05□□□□□ -1.76
SRP54-204ENST00000553923 CEP72Q9P209 647 aa4.05□□□□□ -1.76
SRP54-204ENST00000553923 KRT4P19013 534 aa4.04□□□□□ -1.76
SRP54-204ENST00000553923 PPP2R2AP63151 447 aa4.04□□□□□ -1.76
SRP54-204ENST00000553923 FOXL1Q12952 345 aa4.04□□□□□ -1.76
SRP54-204ENST00000553923 TUBA3CQ13748 450 aa4.04□□□□□ -1.76
SRP54-204ENST00000553923 TUBA3EQ6PEY2 450 aa4.04□□□□□ -1.76
SRP54-204ENST00000553923 LBX2Q6XYB7 198 aa4.04□□□□□ -1.76
SRP54-204ENST00000553923 DNAJC10Q8IXB1 793 aa4.04□□□□□ -1.76
SRP54-204ENST00000553923 SH3RF2Q8TEC5 729 aa4.04□□□□□ -1.76
SRP54-204ENST00000553923 KCTD13Q8WZ19 329 aa4.04□□□□□ -1.76
SRP54-204ENST00000553923 FAM89AQ96GI7 184 aa4.04□□□□□ -1.76
SRP54-204ENST00000553923 MMRN2Q9H8L6 949 aa4.04□□□□□ -1.76
SRP54-204ENST00000553923 A0A1W2PQU0 124 aa4.03□□□□□ -1.76
SRP54-204ENST00000553923 TCRBV5S4A2TA0A5A2 114 aa4.03□□□□□ -1.76
SRP54-204ENST00000553923 ESYT3A0FGR9 886 aa4.03□□□□□ -1.76
SRP54-204ENST00000553923 CDC14BO60729 498 aa4.03□□□□□ -1.76
SRP54-204ENST00000553923 ATF4P18848 351 aaPredicted RBP4.03□□□□□ -1.76
SRP54-204ENST00000553923 GRK2P25098 689 aa4.03□□□□□ -1.76
SRP54-204ENST00000553923 GRK3P35626 688 aa4.03□□□□□ -1.76
SRP54-204ENST00000553923 COL10A1Q03692 680 aa4.03□□□□□ -1.76
SRP54-204ENST00000553923 DBPQ10586 325 aaPredicted RBP4.03□□□□□ -1.76
SRP54-204ENST00000553923 ZMAT1Q5H9K5 638 aa4.03□□□□□ -1.76
SRP54-204ENST00000553923 KCTD1Q719H9 257 aa4.03□□□□□ -1.76
SRP54-204ENST00000553923 SCYL1Q96KG9 808 aa4.03□□□□□ -1.76
SRP54-204ENST00000553923 OR14A2Q96R54 314 aa4.03□□□□□ -1.76
SRP54-204ENST00000553923 PHF20Q9BVI0 1012 aa4.03□□□□□ -1.76
SRP54-204ENST00000553923 ACBD3Q9H3P7 528 aa4.03□□□□□ -1.76
SRP54-204ENST00000553923 SLC39A2Q9NP94 309 aa4.03□□□□□ -1.76
SRP54-204ENST00000553923 ACTR10Q9NZ32 417 aa4.03□□□□□ -1.76
SRP54-204ENST00000553923 HECAQ9UBI9 543 aaPredicted RBP4.03□□□□□ -1.76
SRP54-204ENST00000553923 DMRT1Q9Y5R6 373 aa4.03□□□□□ -1.76
SRP54-204ENST00000553923 ARHGAP6O43182 974 aa4.02□□□□□ -1.77
SRP54-204ENST00000553923 RPS19P39019 145 aaKnown RBP4.02□□□□□ -1.77
SRP54-204ENST00000553923 ETV4P43268 484 aa4.02□□□□□ -1.77
SRP54-204ENST00000553923 RRADP55042 308 aa4.02□□□□□ -1.77
SRP54-204ENST00000553923 SPIRE1Q08AE8 756 aa4.02□□□□□ -1.77
SRP54-204ENST00000553923 NTRK3Q16288 839 aa4.02□□□□□ -1.77
SRP54-204ENST00000553923 SLC10A6Q3KNW5 377 aa4.02□□□□□ -1.77
SRP54-204ENST00000553923 ZNF568Q3ZCX4 644 aa4.02□□□□□ -1.77
SRP54-204ENST00000553923 LARP1BQ659C4 914 aaKnown RBP4.02□□□□□ -1.77
SRP54-204ENST00000553923 LARP4Q71RC2 724 aaKnown RBP eCLIP4.02□□□□□ -1.77
SRP54-204ENST00000553923 MRGPRGQ86SM5 289 aa4.02□□□□□ -1.77
SRP54-204ENST00000553923 ULK2Q8IYT8 1036 aa4.02□□□□□ -1.77
SRP54-204ENST00000553923 ZNF483Q8TF39 744 aaPredicted RBP4.02□□□□□ -1.77
SRP54-204ENST00000553923 IER2Q9BTL4 223 aa4.02□□□□□ -1.77
SRP54-204ENST00000553923 ZDHHC5Q9C0B5 715 aa4.02□□□□□ -1.77
SRP54-204ENST00000553923 MSL2Q9HCI7 577 aa4.02□□□□□ -1.77
SRP54-204ENST00000553923 DSEQ9UL01 958 aa4.02□□□□□ -1.77
SRP54-204ENST00000553923 NR2E1Q9Y466 385 aa4.02□□□□□ -1.77
SRP54-204ENST00000553923 GNAT1P11488 350 aa4.01□□□□□ -1.77
SRP54-204ENST00000553923 HIBADHP31937 336 aaKnown RBP4.01□□□□□ -1.77
SRP54-204ENST00000553923 KIZQ2M2Z5 673 aa4.01□□□□□ -1.77
SRP54-204ENST00000553923 SPTY2D1Q68D10 685 aaPredicted RBP4.01□□□□□ -1.77
SRP54-204ENST00000553923 KCNT2Q6UVM3 1135 aa4.01□□□□□ -1.77
SRP54-204ENST00000553923 USP53Q70EK8 1073 aa4.01□□□□□ -1.77
SRP54-204ENST00000553923 GPR135Q8IZ08 494 aa4.01□□□□□ -1.77
SRP54-204ENST00000553923 KCNJ15Q99712 375 aa4.01□□□□□ -1.77
SRP54-204ENST00000553923 TGIF2Q9GZN2 237 aa4.01□□□□□ -1.77
SRP54-204ENST00000553923 EPN3Q9H201 632 aa4.01□□□□□ -1.77
SRP54-204ENST00000553923 TLR9Q9NR96 1032 aa4.01□□□□□ -1.77
SRP54-204ENST00000553923 PLA2G3Q9NZ20 509 aa4.01□□□□□ -1.77
SRP54-204ENST00000553923 NUB1Q9Y5A7 615 aa4.01□□□□□ -1.77
SRP54-204ENST00000553923 MRVI1Q9Y6F6 885 aa4.01□□□□□ -1.77
SRP54-204ENST00000553923 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4□□□□□ -1.77
SRP54-204ENST00000553923 KRTAP23-1A1A580 65 aa4□□□□□ -1.77
SRP54-204ENST00000553923 FAM90A27PA6NNH2 459 aa4□□□□□ -1.77
SRP54-204ENST00000553923 DDAH1O94760 285 aa4□□□□□ -1.77
SRP54-204ENST00000553923 GJB6O95452 261 aa4□□□□□ -1.77
SRP54-204ENST00000553923 ADH4P08319 380 aa4□□□□□ -1.77
SRP54-204ENST00000553923 MAKP20794 623 aa4□□□□□ -1.77
SRP54-204ENST00000553923 DNAJA1P31689 397 aaKnown RBP4□□□□□ -1.77
SRP54-204ENST00000553923 MSX2P35548 267 aaPredicted RBP4□□□□□ -1.77
SRP54-204ENST00000553923 EIF4HQ15056 248 aaKnown RBP4□□□□□ -1.77
SRP54-204ENST00000553923 STILQ15468 1287 aa4□□□□□ -1.77
SRP54-204ENST00000553923 TNNI3KQ59H18 835 aa4□□□□□ -1.77
SRP54-204ENST00000553923 TRIM68Q6AZZ1 485 aa4□□□□□ -1.77
SRP54-204ENST00000553923 DPP8Q6V1X1 898 aaPredicted RBP4□□□□□ -1.77
SRP54-204ENST00000553923 USP30Q70CQ3 517 aa4□□□□□ -1.77
SRP54-204ENST00000553923 TMPRSS6Q8IU80 811 aa4□□□□□ -1.77
SRP54-204ENST00000553923 DCAF4Q8WV16 495 aa4□□□□□ -1.77
SRP54-204ENST00000553923 VOPP1Q96AW1 172 aa4□□□□□ -1.77
SRP54-204ENST00000553923 ZG16BQ96DA0 208 aa4□□□□□ -1.77
SRP54-204ENST00000553923 ZFYVE21Q9BQ24 234 aa4□□□□□ -1.77
SRP54-204ENST00000553923 CD244Q9BZW8 370 aa4□□□□□ -1.77
SRP54-204ENST00000553923 AURKAIP1Q9NWT8 199 aaPredicted RBP4□□□□□ -1.77
SRP54-204ENST00000553923 PRKAG3Q9UGI9 489 aa4□□□□□ -1.77
SRP54-204ENST00000553923 SOD2P04179 222 aa3.99□□□□□ -1.77
SRP54-204ENST00000553923 GJA4P35212 333 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms