RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-223	ENST00000553686	TJP1	Q07157	1748 aa		7.78	□□□□□ -1.16
ATXN3-223	ENST00000553686	RANBP2	P49792	3224 aa	Known RBP	7.77	□□□□□ -1.17
ATXN3-223	ENST00000553686	KIAA0100	Q14667	2235 aa	Known RBP	7.77	□□□□□ -1.17
ATXN3-223	ENST00000553686	ZNF503-AS2	A6NEH8	195 aa		7.77	□□□□□ -1.17
ATXN3-223	ENST00000553686		C9IYK1	514 aa		7.77	□□□□□ -1.17
ATXN3-223	ENST00000553686	SIGLEC6	O43699	453 aa		7.77	□□□□□ -1.17
ATXN3-223	ENST00000553686	GLI1	P08151	1106 aa		7.77	□□□□□ -1.17
ATXN3-223	ENST00000553686	PLA2G5	P39877	138 aa		7.77	□□□□□ -1.17
ATXN3-223	ENST00000553686	PMS1	P54277	932 aa	Known RBP	7.77	□□□□□ -1.17
ATXN3-223	ENST00000553686	ZYX	Q15942	572 aa	Known RBP	7.77	□□□□□ -1.17
ATXN3-223	ENST00000553686	RNF111	Q6ZNA4	994 aa		7.77	□□□□□ -1.17
ATXN3-223	ENST00000553686	MOB2	Q70IA6	237 aa		7.77	□□□□□ -1.17
ATXN3-223	ENST00000553686	C7orf61	Q8IZ16	206 aa		7.77	□□□□□ -1.17
ATXN3-223	ENST00000553686	CPLX3	Q8WVH0	158 aa		7.77	□□□□□ -1.17
ATXN3-223	ENST00000553686	SRRT	Q9BXP5	876 aa	Known RBP	7.77	□□□□□ -1.17
ATXN3-223	ENST00000553686	KRTAP9-2	Q9BYQ4	174 aa		7.77	□□□□□ -1.17
ATXN3-223	ENST00000553686	CHST7	Q9NS84	486 aa		7.77	□□□□□ -1.17
ATXN3-223	ENST00000553686	COL11A2	P13942	1736 aa	Predicted RBP	7.77	□□□□□ -1.17
ATXN3-223	ENST00000553686	ANKRD31	Q8N7Z5	1873 aa		7.77	□□□□□ -1.17
ATXN3-223	ENST00000553686	ERVV-1	B6SEH8	477 aa		7.76	□□□□□ -1.17
ATXN3-223	ENST00000553686	HPX	P02790	462 aa		7.76	□□□□□ -1.17
ATXN3-223	ENST00000553686	TP53	P04637	393 aa	Predicted RBP	7.76	□□□□□ -1.17
ATXN3-223	ENST00000553686	SNRPA1	P09661	255 aa	Known RBP	7.76	□□□□□ -1.17
ATXN3-223	ENST00000553686	RPL10	P27635	214 aa	Known RBP	7.76	□□□□□ -1.17
ATXN3-223	ENST00000553686	ERCC5	P28715	1186 aa	Predicted RBP	7.76	□□□□□ -1.17
ATXN3-223	ENST00000553686	TRHR	P34981	398 aa	Predicted RBP	7.76	□□□□□ -1.17
ATXN3-223	ENST00000553686	GIPR	P48546	466 aa		7.76	□□□□□ -1.17
ATXN3-223	ENST00000553686	RBM25	P49756	843 aa	Known RBP	7.76	□□□□□ -1.17
ATXN3-223	ENST00000553686	PCBP3	P57721	371 aa	Known RBP	7.76	□□□□□ -1.17
ATXN3-223	ENST00000553686	HLF	Q16534	295 aa		7.76	□□□□□ -1.17
ATXN3-223	ENST00000553686	MTHFSD	Q2M296	383 aa	Known RBP	7.76	□□□□□ -1.17
ATXN3-223	ENST00000553686	OXR1	Q8N573	874 aa		7.76	□□□□□ -1.17
ATXN3-223	ENST00000553686	LIN37	Q96GY3	246 aa	Predicted RBP	7.76	□□□□□ -1.17
ATXN3-223	ENST00000553686	SEC16B	Q96JE7	1060 aa		7.76	□□□□□ -1.17
ATXN3-223	ENST00000553686	FOXP3	Q9BZS1	431 aa		7.76	□□□□□ -1.17
ATXN3-223	ENST00000553686	GFOD1	Q9NXC2	390 aa		7.76	□□□□□ -1.17
ATXN3-223	ENST00000553686	FAM53C	Q9NYF3	392 aa		7.76	□□□□□ -1.17
ATXN3-223	ENST00000553686	PODXL2	Q9NZ53	605 aa		7.76	□□□□□ -1.17
ATXN3-223	ENST00000553686	TCFL5	Q9UL49	500 aa		7.76	□□□□□ -1.17
ATXN3-223	ENST00000553686	MRC1	P22897	1456 aa		7.75	□□□□□ -1.17
ATXN3-223	ENST00000553686	MEIS1	O00470	390 aa		7.75	□□□□□ -1.17
ATXN3-223	ENST00000553686	SYP	P08247	313 aa		7.75	□□□□□ -1.17
ATXN3-223	ENST00000553686	VIL1	P09327	827 aa	Known RBP	7.75	□□□□□ -1.17
ATXN3-223	ENST00000553686	IL13	P35225	146 aa		7.75	□□□□□ -1.17
ATXN3-223	ENST00000553686	PIP4K2A	P48426	406 aa	Predicted RBP	7.75	□□□□□ -1.17
ATXN3-223	ENST00000553686	TDRD10	Q5VZ19	366 aa	Known RBP	7.75	□□□□□ -1.17
ATXN3-223	ENST00000553686	PPP1R42	Q7Z4L9	355 aa		7.75	□□□□□ -1.17
ATXN3-223	ENST00000553686	PDZD8	Q8NEN9	1154 aa		7.75	□□□□□ -1.17
ATXN3-223	ENST00000553686	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	7.75	□□□□□ -1.17
ATXN3-223	ENST00000553686	STAP2	Q9UGK3	403 aa		7.75	□□□□□ -1.17
ATXN3-223	ENST00000553686	EBF1	Q9UH73	591 aa		7.75	□□□□□ -1.17
ATXN3-223	ENST00000553686	ZNF281	Q9Y2X9	895 aa		7.75	□□□□□ -1.17
ATXN3-223	ENST00000553686	BCOR	Q6W2J9	1755 aa		7.74	□□□□□ -1.17
ATXN3-223	ENST00000553686	ABCC12	Q96J65	1359 aa		7.74	□□□□□ -1.17
ATXN3-223	ENST00000553686	LRRC10B	A6NIK2	292 aa		7.74	□□□□□ -1.17
ATXN3-223	ENST00000553686	BTBD11	A6QL63	1104 aa		7.74	□□□□□ -1.17
ATXN3-223	ENST00000553686	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	7.74	□□□□□ -1.17
ATXN3-223	ENST00000553686	ZBTB48	P10074	688 aa	Predicted RBP	7.74	□□□□□ -1.17
ATXN3-223	ENST00000553686	TCF3	P15923	654 aa		7.74	□□□□□ -1.17
ATXN3-223	ENST00000553686	CAPN2	P17655	700 aa		7.74	□□□□□ -1.17
ATXN3-223	ENST00000553686	BMP8B	P34820	402 aa		7.74	□□□□□ -1.17
ATXN3-223	ENST00000553686	ZNF280A	P59817	542 aa	Predicted RBP	7.74	□□□□□ -1.17
ATXN3-223	ENST00000553686	DUSP4	Q13115	394 aa		7.74	□□□□□ -1.17
ATXN3-223	ENST00000553686	LRIT3	Q3SXY7	679 aa		7.74	□□□□□ -1.17
ATXN3-223	ENST00000553686	ANKRD39	Q53RE8	183 aa		7.74	□□□□□ -1.17
ATXN3-223	ENST00000553686	AXDND1	Q5T1B0	1012 aa	Predicted RBP	7.74	□□□□□ -1.17
ATXN3-223	ENST00000553686	MPZL3	Q6UWV2	235 aa		7.74	□□□□□ -1.17
ATXN3-223	ENST00000553686	DDX46	Q7L014	1031 aa	Known RBP	7.74	□□□□□ -1.17
ATXN3-223	ENST00000553686		Q7L0L9	218 aa		7.74	□□□□□ -1.17
ATXN3-223	ENST00000553686	SPPL2C	Q8IUH8	684 aa		7.74	□□□□□ -1.17
ATXN3-223	ENST00000553686	POU5F2	Q8N7G0	328 aa		7.74	□□□□□ -1.17
ATXN3-223	ENST00000553686	AGBL3	Q8NEM8	1001 aa		7.74	□□□□□ -1.17
ATXN3-223	ENST00000553686	OR6P1	Q8NGX9	317 aa		7.74	□□□□□ -1.17
ATXN3-223	ENST00000553686	EYA3	Q99504	573 aa		7.74	□□□□□ -1.17
ATXN3-223	ENST00000553686	DBNDD1	Q9H9R9	158 aa		7.74	□□□□□ -1.17
ATXN3-223	ENST00000553686	FAM86C1	Q9NVL1	165 aa		7.74	□□□□□ -1.17
ATXN3-223	ENST00000553686	ZMYM5	Q9UJ78	669 aa		7.74	□□□□□ -1.17
ATXN3-223	ENST00000553686	ZNF214	Q9UL59	606 aa	Predicted RBP	7.74	□□□□□ -1.17
ATXN3-223	ENST00000553686	PTCH2	Q9Y6C5	1203 aa		7.74	□□□□□ -1.17
ATXN3-223	ENST00000553686	RIC1	Q4ADV7	1423 aa		7.74	□□□□□ -1.17
ATXN3-223	ENST00000553686	ASTN2	O75129	1339 aa	Predicted RBP	7.74	□□□□□ -1.17
ATXN3-223	ENST00000553686	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	7.73	□□□□□ -1.17
ATXN3-223	ENST00000553686	WDHD1	O75717	1129 aa	Predicted RBP	7.73	□□□□□ -1.17
ATXN3-223	ENST00000553686	PRMT2	P55345	433 aa		7.73	□□□□□ -1.17
ATXN3-223	ENST00000553686	CRHR2	Q13324	411 aa		7.73	□□□□□ -1.17
ATXN3-223	ENST00000553686	KIF22	Q14807	665 aa		7.73	□□□□□ -1.17
ATXN3-223	ENST00000553686	MLANA	Q16655	118 aa		7.73	□□□□□ -1.17
ATXN3-223	ENST00000553686	BBS9	Q3SYG4	887 aa		7.73	□□□□□ -1.17
ATXN3-223	ENST00000553686	PARP10	Q53GL7	1025 aa		7.73	□□□□□ -1.17
ATXN3-223	ENST00000553686	SLC10A5	Q5PT55	438 aa		7.73	□□□□□ -1.17
ATXN3-223	ENST00000553686	SUSD4	Q5VX71	490 aa		7.73	□□□□□ -1.17
ATXN3-223	ENST00000553686	DCAF15	Q66K64	600 aa		7.73	□□□□□ -1.17
ATXN3-223	ENST00000553686	PPFIBP1	Q86W92	1011 aa		7.73	□□□□□ -1.17
ATXN3-223	ENST00000553686	IL17RE	Q8NFR9	667 aa		7.73	□□□□□ -1.17
ATXN3-223	ENST00000553686	LINC01599	Q8WXQ3	324 aa		7.73	□□□□□ -1.17
ATXN3-223	ENST00000553686	SP110	Q9HB58	689 aa		7.73	□□□□□ -1.17
ATXN3-223	ENST00000553686	GOLGA2P5	Q9HBQ8	144 aa		7.73	□□□□□ -1.17
ATXN3-223	ENST00000553686	ABCC4	O15439	1325 aa		7.73	□□□□□ -1.17
ATXN3-223	ENST00000553686	IBTK	Q9P2D0	1353 aa	Predicted RBP	7.72	□□□□□ -1.17
ATXN3-223	ENST00000553686	KRTAP9-6	A0A140TA67	174 aa		7.72	□□□□□ -1.17

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