RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 ARHGAP20Q9P2F6 1191 aa4.91□□□□□ -1.62
VRK1-202ENST00000553683 B3GALT1Q9Y5Z6 326 aa4.91□□□□□ -1.62
VRK1-202ENST00000553683 A0A1B0GTL3 188 aa4.9□□□□□ -1.63
VRK1-202ENST00000553683 DDX3XO00571 662 aaKnown RBP eCLIP4.9□□□□□ -1.63
VRK1-202ENST00000553683 MAFO75444 373 aaPredicted RBP4.9□□□□□ -1.63
VRK1-202ENST00000553683 DNAJC8O75937 253 aaPredicted RBP4.9□□□□□ -1.63
VRK1-202ENST00000553683 FBXO21O94952 628 aa4.9□□□□□ -1.63
VRK1-202ENST00000553683 KNG1P01042 644 aa4.9□□□□□ -1.63
VRK1-202ENST00000553683 COL6A1P12109 1028 aa4.9□□□□□ -1.63
VRK1-202ENST00000553683 AOAHP28039 575 aa4.9□□□□□ -1.63
VRK1-202ENST00000553683 CTSWP56202 376 aa4.9□□□□□ -1.63
VRK1-202ENST00000553683 PABPC4Q13310 644 aaKnown RBP eCLIP4.9□□□□□ -1.63
VRK1-202ENST00000553683 NFIXQ14938 502 aa4.9□□□□□ -1.63
VRK1-202ENST00000553683 RGL3Q3MIN7 710 aa4.9□□□□□ -1.63
VRK1-202ENST00000553683 NT5DC1Q5TFE4 455 aa4.9□□□□□ -1.63
VRK1-202ENST00000553683 PKN3Q6P5Z2 889 aa4.9□□□□□ -1.63
VRK1-202ENST00000553683 LILRA6Q6PI73 481 aa4.9□□□□□ -1.63
VRK1-202ENST00000553683 TMC5Q6UXY8 1006 aa4.9□□□□□ -1.63
VRK1-202ENST00000553683 UBE2R2Q712K3 238 aaPredicted RBP4.9□□□□□ -1.63
VRK1-202ENST00000553683 PLEKHH3Q7Z736 793 aa4.9□□□□□ -1.63
VRK1-202ENST00000553683 REXO1L1PQ8IX06 675 aa4.9□□□□□ -1.63
VRK1-202ENST00000553683 RBM12BQ8IXT5 1001 aaKnown RBP4.9□□□□□ -1.63
VRK1-202ENST00000553683 LGI4Q8N135 537 aa4.9□□□□□ -1.63
VRK1-202ENST00000553683 KLHL36Q8N4N3 616 aa4.9□□□□□ -1.63
VRK1-202ENST00000553683 C2orf69Q8N8R5 385 aa4.9□□□□□ -1.63
VRK1-202ENST00000553683 IGSF22Q8N9C0 903 aa4.9□□□□□ -1.63
VRK1-202ENST00000553683 TXNDC5Q8NBS9 432 aaKnown RBP4.9□□□□□ -1.63
VRK1-202ENST00000553683 NINJ1Q92982 152 aa4.9□□□□□ -1.63
VRK1-202ENST00000553683 FEZ1Q99689 392 aa4.9□□□□□ -1.63
VRK1-202ENST00000553683 SYT3Q9BQG1 590 aa4.9□□□□□ -1.63
VRK1-202ENST00000553683 BOCQ9BWV1 1114 aa4.9□□□□□ -1.63
VRK1-202ENST00000553683 TMEM168Q9H0V1 697 aa4.9□□□□□ -1.63
VRK1-202ENST00000553683 KANSL2Q9H9L4 492 aa4.9□□□□□ -1.63
VRK1-202ENST00000553683 FTSJ1Q9UET6 329 aa4.9□□□□□ -1.63
VRK1-202ENST00000553683 COQ6Q9Y2Z9 468 aa4.9□□□□□ -1.63
VRK1-202ENST00000553683 ASB1Q9Y576 335 aa4.9□□□□□ -1.63
VRK1-202ENST00000553683 KRTAP4-8A0A0G2JLE6 195 aa4.89□□□□□ -1.63
VRK1-202ENST00000553683 A0A0G2JLL6 359 aaPredicted RBP4.89□□□□□ -1.63
VRK1-202ENST00000553683 PPP1R12AO14974 1030 aaPredicted RBP4.89□□□□□ -1.63
VRK1-202ENST00000553683 OPA1O60313 960 aa4.89□□□□□ -1.63
VRK1-202ENST00000553683 CUTAO60888 179 aa4.89□□□□□ -1.63
VRK1-202ENST00000553683 HIP1RO75146 1068 aa4.89□□□□□ -1.63
VRK1-202ENST00000553683 CDC45O75419 566 aa4.89□□□□□ -1.63
VRK1-202ENST00000553683 KRT15P19012 456 aa4.89□□□□□ -1.63
VRK1-202ENST00000553683 PTGS1P23219 599 aa4.89□□□□□ -1.63
VRK1-202ENST00000553683 FNTBP49356 437 aa4.89□□□□□ -1.63
VRK1-202ENST00000553683 MLLT6P55198 1093 aaPredicted RBP4.89□□□□□ -1.63
VRK1-202ENST00000553683 RTP5Q14D33 572 aa4.89□□□□□ -1.63
VRK1-202ENST00000553683 STILQ15468 1287 aa4.89□□□□□ -1.63
VRK1-202ENST00000553683 TAF7LQ5H9L4 462 aa4.89□□□□□ -1.63
VRK1-202ENST00000553683 CC2D1AQ6P1N0 951 aaPredicted RBP4.89□□□□□ -1.63
VRK1-202ENST00000553683 ABHD17CQ6PCB6 329 aa4.89□□□□□ -1.63
VRK1-202ENST00000553683 KIAA0907Q7Z7F0 614 aaPredicted RBP4.89□□□□□ -1.63
VRK1-202ENST00000553683 STK32CQ86UX6 486 aa4.89□□□□□ -1.63
VRK1-202ENST00000553683 ADGRG2Q8IZP9 1017 aa4.89□□□□□ -1.63
VRK1-202ENST00000553683 CHST14Q8NCH0 376 aa4.89□□□□□ -1.63
VRK1-202ENST00000553683 FEZF2Q8TBJ5 459 aa4.89□□□□□ -1.63
VRK1-202ENST00000553683 ZCCHC14Q8WYQ9 949 aaKnown RBP4.89□□□□□ -1.63
VRK1-202ENST00000553683 AJUBAQ96IF1 538 aa4.89□□□□□ -1.63
VRK1-202ENST00000553683 C20orf173Q96LM9 149 aa4.89□□□□□ -1.63
VRK1-202ENST00000553683 BARX1Q9HBU1 254 aaPredicted RBP4.89□□□□□ -1.63
VRK1-202ENST00000553683 CABP5Q9NP86 173 aa4.89□□□□□ -1.63
VRK1-202ENST00000553683 FANCLQ9NW38 375 aa4.89□□□□□ -1.63
VRK1-202ENST00000553683 GALNT8Q9NY28 637 aa4.89□□□□□ -1.63
VRK1-202ENST00000553683 SAMD15Q9P1V8 674 aa4.89□□□□□ -1.63
VRK1-202ENST00000553683 BTBD7Q9P203 1132 aa4.89□□□□□ -1.63
VRK1-202ENST00000553683 ARHGAP28Q9P2N2 729 aa4.89□□□□□ -1.63
VRK1-202ENST00000553683 FBXO10Q9UK96 956 aa4.89□□□□□ -1.63
VRK1-202ENST00000553683 CROTQ9UKG9 612 aa4.89□□□□□ -1.63
VRK1-202ENST00000553683 KLHL18O94889 574 aa4.88□□□□□ -1.63
VRK1-202ENST00000553683 CYP1A1P04798 512 aaPredicted RBP4.88□□□□□ -1.63
VRK1-202ENST00000553683 ZBTB48P10074 688 aaPredicted RBP4.88□□□□□ -1.63
VRK1-202ENST00000553683 PLEKHG4Q58EX7 1191 aa4.88□□□□□ -1.63
VRK1-202ENST00000553683 SYT8Q8NBV8 401 aa4.88□□□□□ -1.63
VRK1-202ENST00000553683 RELTQ969Z4 430 aa4.88□□□□□ -1.63
VRK1-202ENST00000553683 E2F7Q96AV8 911 aa4.88□□□□□ -1.63
VRK1-202ENST00000553683 MBD6Q96DN6 1003 aa4.88□□□□□ -1.63
VRK1-202ENST00000553683 BTBD2Q9BX70 525 aa4.88□□□□□ -1.63
VRK1-202ENST00000553683 TMX1Q9H3N1 280 aa4.88□□□□□ -1.63
VRK1-202ENST00000553683 INCENPQ9NQS7 918 aa4.88□□□□□ -1.63
VRK1-202ENST00000553683 ACSS2Q9NR19 701 aa4.88□□□□□ -1.63
VRK1-202ENST00000553683 B4GALT6Q9UBX8 382 aa4.88□□□□□ -1.63
VRK1-202ENST00000553683 ZFP69BQ9UJL9 534 aa4.88□□□□□ -1.63
VRK1-202ENST00000553683 ADAM29Q9UKF5 820 aa4.88□□□□□ -1.63
VRK1-202ENST00000553683 TBX22Q9Y458 520 aa4.88□□□□□ -1.63
VRK1-202ENST00000553683 TNPO3Q9Y5L0 923 aaKnown RBP4.88□□□□□ -1.63
VRK1-202ENST00000553683 TLDC2A0PJX2 215 aa4.87□□□□□ -1.63
VRK1-202ENST00000553683 H0Y858 1186 aa4.87□□□□□ -1.63
VRK1-202ENST00000553683 CBX4O00257 560 aa4.87□□□□□ -1.63
VRK1-202ENST00000553683 FOXP2O15409 715 aa4.87□□□□□ -1.63
VRK1-202ENST00000553683 IL18BPO95998 194 aa4.87□□□□□ -1.63
VRK1-202ENST00000553683 CYP17A1P05093 508 aa4.87□□□□□ -1.63
VRK1-202ENST00000553683 IRF9Q00978 393 aa4.87□□□□□ -1.63
VRK1-202ENST00000553683 NFATC3Q12968 1075 aa4.87□□□□□ -1.63
VRK1-202ENST00000553683 MCTP2Q6DN12 878 aa4.87□□□□□ -1.63
VRK1-202ENST00000553683 TRMT10BQ6PF06 316 aaKnown RBP4.87□□□□□ -1.63
VRK1-202ENST00000553683 Q6ZUG5 572 aa4.87□□□□□ -1.63
VRK1-202ENST00000553683 JAZF1Q86VZ6 243 aa4.87□□□□□ -1.63
VRK1-202ENST00000553683 NME9Q86XW9 330 aa4.87□□□□□ -1.63
VRK1-202ENST00000553683 AHI1Q8N157 1196 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms