RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 CNNM3Q8NE01 707 aa10.94□□□□□ -0.66
CHD8-204ENST00000553622 RDM1Q8NG50 284 aa10.94□□□□□ -0.66
CHD8-204ENST00000553622 NEK9Q8TD19 979 aa10.94□□□□□ -0.66
CHD8-204ENST00000553622 AFG1LQ8WV93 481 aa10.94□□□□□ -0.66
CHD8-204ENST00000553622 SYAP1Q96A49 352 aaPredicted RBP10.94□□□□□ -0.66
CHD8-204ENST00000553622 CCDC43Q96MW1 224 aaKnown RBP10.94□□□□□ -0.66
CHD8-204ENST00000553622 PNMA5Q96PV4 448 aa10.94□□□□□ -0.66
CHD8-204ENST00000553622 PYM1Q9BRP8 204 aaKnown RBP10.94□□□□□ -0.66
CHD8-204ENST00000553622 LXNQ9BS40 222 aa10.94□□□□□ -0.66
CHD8-204ENST00000553622 NT5C3AQ9H0P0 336 aa10.94□□□□□ -0.66
CHD8-204ENST00000553622 AP5M1Q9H0R1 490 aa10.94□□□□□ -0.66
CHD8-204ENST00000553622 TUFT1Q9NNX1 390 aa10.94□□□□□ -0.66
CHD8-204ENST00000553622 GABBR1Q9UBS5 961 aa10.94□□□□□ -0.66
CHD8-204ENST00000553622 SERTAD1Q9UHV2 236 aa10.94□□□□□ -0.66
CHD8-204ENST00000553622 NRBP1Q9UHY1 535 aa10.94□□□□□ -0.66
CHD8-204ENST00000553622 HPSEQ9Y251 543 aa10.94□□□□□ -0.66
CHD8-204ENST00000553622 GSTTP1A0A1W2PQM5 241 aa10.93□□□□□ -0.66
CHD8-204ENST00000553622 ADCY6O43306 1168 aa10.93□□□□□ -0.66
CHD8-204ENST00000553622 P4HBP07237 508 aaKnown RBP10.93□□□□□ -0.66
CHD8-204ENST00000553622 RPA1P27694 616 aa10.93□□□□□ -0.66
CHD8-204ENST00000553622 TCF7P36402 384 aaPredicted RBP10.93□□□□□ -0.66
CHD8-204ENST00000553622 AFMP43652 599 aa10.93□□□□□ -0.66
CHD8-204ENST00000553622 QARSP47897 775 aaKnown RBP10.93□□□□□ -0.66
CHD8-204ENST00000553622 CHMP4BP1P59074 171 aa10.93□□□□□ -0.66
CHD8-204ENST00000553622 SNW1Q13573 536 aaKnown RBP10.93□□□□□ -0.66
CHD8-204ENST00000553622 ECM1Q16610 540 aa10.93□□□□□ -0.66
CHD8-204ENST00000553622 UGCGQ16739 394 aa10.93□□□□□ -0.66
CHD8-204ENST00000553622 KLHL40Q2TBA0 621 aa10.93□□□□□ -0.66
CHD8-204ENST00000553622 HSDL1Q3SXM5 330 aa10.93□□□□□ -0.66
CHD8-204ENST00000553622 LONRF3Q496Y0 759 aa10.93□□□□□ -0.66
CHD8-204ENST00000553622 FAM160B1Q5W0V3 765 aa10.93□□□□□ -0.66
CHD8-204ENST00000553622 B3GNT9Q6UX72 402 aa10.93□□□□□ -0.66
CHD8-204ENST00000553622 PXYLP1Q8TE99 480 aa10.93□□□□□ -0.66
CHD8-204ENST00000553622 SH3TC2Q8TF17 1288 aa10.93□□□□□ -0.66
CHD8-204ENST00000553622 SEPT1Q8WYJ6 367 aa10.93□□□□□ -0.66
CHD8-204ENST00000553622 GLG1Q92896 1179 aa10.93□□□□□ -0.66
CHD8-204ENST00000553622 ATP6V0A1Q93050 837 aa10.93□□□□□ -0.66
CHD8-204ENST00000553622 CCDC34Q96HJ3 373 aa10.93□□□□□ -0.66
CHD8-204ENST00000553622 GPR20Q99678 358 aa10.93□□□□□ -0.66
CHD8-204ENST00000553622 POLR3CQ9BUI4 534 aaPredicted RBP10.93□□□□□ -0.66
CHD8-204ENST00000553622 NUP62CLQ9H1M0 184 aa10.93□□□□□ -0.66
CHD8-204ENST00000553622 TNMDQ9H2S6 317 aa10.93□□□□□ -0.66
CHD8-204ENST00000553622 AZI2Q9H6S1 392 aa10.93□□□□□ -0.66
CHD8-204ENST00000553622 ZNF302Q9NR11 478 aa10.93□□□□□ -0.66
CHD8-204ENST00000553622 PTPN22Q9Y2R2 807 aa10.93□□□□□ -0.66
CHD8-204ENST00000553622 CEP350Q5VT06 3117 aa10.92□□□□□ -0.66
CHD8-204ENST00000553622 FAM237AA0A1B0GTK4 181 aa10.92□□□□□ -0.66
CHD8-204ENST00000553622 E9PMD0 336 aa10.92□□□□□ -0.66
CHD8-204ENST00000553622 SLC26A4O43511 780 aa10.92□□□□□ -0.66
CHD8-204ENST00000553622 SLITRK3O94933 977 aa10.92□□□□□ -0.66
CHD8-204ENST00000553622 IGHA2P01877 340 aa10.92□□□□□ -0.66
CHD8-204ENST00000553622 SPATA31C1P0DKV0 1188 aa10.92□□□□□ -0.66
CHD8-204ENST00000553622 RARBP10826 455 aa10.92□□□□□ -0.66
CHD8-204ENST00000553622 MARK3P27448 753 aa10.92□□□□□ -0.66
CHD8-204ENST00000553622 PSMC5P62195 406 aa10.92□□□□□ -0.66
CHD8-204ENST00000553622 MCM6Q14566 821 aa10.92□□□□□ -0.66
CHD8-204ENST00000553622 SLC9C1Q4G0N8 1177 aa10.92□□□□□ -0.66
CHD8-204ENST00000553622 TMEM119Q4V9L6 283 aa10.92□□□□□ -0.66
CHD8-204ENST00000553622 BRDTQ58F21 947 aaPredicted RBP10.92□□□□□ -0.66
CHD8-204ENST00000553622 CCDC183Q5T5S1 534 aa10.92□□□□□ -0.66
CHD8-204ENST00000553622 PDXDC2PQ6P474 469 aa10.92□□□□□ -0.66
CHD8-204ENST00000553622 ABHD15Q6UXT9 468 aa10.92□□□□□ -0.66
CHD8-204ENST00000553622 KRBA2Q6ZNG9 492 aa10.92□□□□□ -0.66
CHD8-204ENST00000553622 CTU1Q7Z7A3 348 aaKnown RBP10.92□□□□□ -0.66
CHD8-204ENST00000553622 CCDC60Q8IWA6 550 aaPredicted RBP10.92□□□□□ -0.66
CHD8-204ENST00000553622 GRAMD1CQ8IYS0 662 aa10.92□□□□□ -0.66
CHD8-204ENST00000553622 ENGASEQ8NFI3 743 aa10.92□□□□□ -0.66
CHD8-204ENST00000553622 PPTC7Q8NI37 304 aa10.92□□□□□ -0.66
CHD8-204ENST00000553622 PIGOQ8TEQ8 1089 aa10.92□□□□□ -0.66
CHD8-204ENST00000553622 STAMQ92783 540 aa10.92□□□□□ -0.66
CHD8-204ENST00000553622 GZF1Q9H116 711 aaPredicted RBP10.92□□□□□ -0.66
CHD8-204ENST00000553622 ZSWIM4Q9H7M6 989 aa10.92□□□□□ -0.66
CHD8-204ENST00000553622 STK17AQ9UEE5 414 aa10.92□□□□□ -0.66
CHD8-204ENST00000553622 USP25Q9UHP3 1055 aa10.92□□□□□ -0.66
CHD8-204ENST00000553622 HOOK1Q9UJC3 728 aaKnown RBP10.92□□□□□ -0.66
CHD8-204ENST00000553622 DNM3Q9UQ16 869 aa10.92□□□□□ -0.66
CHD8-204ENST00000553622 SEPT4O43236 478 aa10.91□□□□□ -0.66
CHD8-204ENST00000553622 ACTN4O43707 911 aaKnown RBP10.91□□□□□ -0.66
CHD8-204ENST00000553622 DKC1O60832 514 aaKnown RBP eCLIP10.91□□□□□ -0.66
CHD8-204ENST00000553622 DUSP11O75319 330 aaKnown RBP10.91□□□□□ -0.66
CHD8-204ENST00000553622 KRT18P05783 430 aaKnown RBP10.91□□□□□ -0.66
CHD8-204ENST00000553622 MMP3P08254 477 aa10.91□□□□□ -0.66
CHD8-204ENST00000553622 MYL3P08590 195 aa10.91□□□□□ -0.66
CHD8-204ENST00000553622 C6orf222P0C671 652 aaPredicted RBP10.91□□□□□ -0.66
CHD8-204ENST00000553622 SLFN14P0C7P3 912 aa10.91□□□□□ -0.66
CHD8-204ENST00000553622 ZNF286BP0CG31 522 aa10.91□□□□□ -0.66
CHD8-204ENST00000553622 STAT5BP51692 787 aa10.91□□□□□ -0.66
CHD8-204ENST00000553622 PSMC6P62333 389 aa10.91□□□□□ -0.66
CHD8-204ENST00000553622 BEX3Q00994 111 aa10.91□□□□□ -0.66
CHD8-204ENST00000553622 PRKCEQ02156 737 aa10.91□□□□□ -0.66
CHD8-204ENST00000553622 E2F4Q16254 413 aa10.91□□□□□ -0.66
CHD8-204ENST00000553622 KCNK18Q7Z418 384 aa10.91□□□□□ -0.66
CHD8-204ENST00000553622 TRIM50Q86XT4 487 aa10.91□□□□□ -0.66
CHD8-204ENST00000553622 LARP4BQ92615 738 aaKnown RBP10.91□□□□□ -0.66
CHD8-204ENST00000553622 RAD54LQ92698 747 aa10.91□□□□□ -0.66
CHD8-204ENST00000553622 EMID1Q96A84 441 aaPredicted RBP10.91□□□□□ -0.66
CHD8-204ENST00000553622 NACC1Q96RE7 527 aa10.91□□□□□ -0.66
CHD8-204ENST00000553622 HSD17B14Q9BPX1 270 aa10.91□□□□□ -0.66
CHD8-204ENST00000553622 CLSTN2Q9H4D0 955 aa10.91□□□□□ -0.66
CHD8-204ENST00000553622 SPC25Q9HBM1 224 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms