RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 HAS3O00219 553 aa12.96□□□□□ -0.33
TMEM116-218ENST00000552839 PPP1R11O60927 126 aaPredicted RBP12.96□□□□□ -0.33
TMEM116-218ENST00000552839 DTNBO60941 627 aa12.96□□□□□ -0.33
TMEM116-218ENST00000552839 PSEN2P49810 448 aa12.96□□□□□ -0.33
TMEM116-218ENST00000552839 ST3GAL1Q11201 340 aa12.96□□□□□ -0.33
TMEM116-218ENST00000552839 PTK7Q13308 1070 aa12.96□□□□□ -0.33
TMEM116-218ENST00000552839 CUL4AQ13619 759 aa12.96□□□□□ -0.33
TMEM116-218ENST00000552839 DGKDQ16760 1214 aa12.96□□□□□ -0.33
TMEM116-218ENST00000552839 FAM177A1Q8N128 213 aaPredicted RBP12.96□□□□□ -0.33
TMEM116-218ENST00000552839 C7orf31Q8N865 590 aa12.96□□□□□ -0.33
TMEM116-218ENST00000552839 NEK9Q8TD19 979 aa12.96□□□□□ -0.33
TMEM116-218ENST00000552839 MRPL38Q96DV4 380 aaKnown RBP12.96□□□□□ -0.33
TMEM116-218ENST00000552839 TSHZ2Q9NRE2 1034 aa12.96□□□□□ -0.33
TMEM116-218ENST00000552839 COL20A1Q9P218 1284 aa12.96□□□□□ -0.33
TMEM116-218ENST00000552839 INSL6Q9Y581 213 aa12.96□□□□□ -0.33
TMEM116-218ENST00000552839 POTEB3A0JP26 581 aa12.95□□□□□ -0.34
TMEM116-218ENST00000552839 VPS37CA5D8V6 355 aaPredicted RBP12.95□□□□□ -0.34
TMEM116-218ENST00000552839 H3BQ06 376 aaPredicted RBP12.95□□□□□ -0.34
TMEM116-218ENST00000552839 LGR5O75473 907 aa12.95□□□□□ -0.34
TMEM116-218ENST00000552839 HTRA4P83105 476 aaPredicted RBP12.95□□□□□ -0.34
TMEM116-218ENST00000552839 GUCY1B3Q02153 619 aa12.95□□□□□ -0.34
TMEM116-218ENST00000552839 NHLH1Q02575 133 aa12.95□□□□□ -0.34
TMEM116-218ENST00000552839 MKRN4PQ13434 485 aaPredicted RBP12.95□□□□□ -0.34
TMEM116-218ENST00000552839 HIC1Q14526 733 aa12.95□□□□□ -0.34
TMEM116-218ENST00000552839 MFSD10Q14728 455 aa12.95□□□□□ -0.34
TMEM116-218ENST00000552839 PKN1Q16512 942 aa12.95□□□□□ -0.34
TMEM116-218ENST00000552839 CSPP1Q1MSJ5 1256 aa12.95□□□□□ -0.34
TMEM116-218ENST00000552839 KIAA0753Q2KHM9 967 aa12.95□□□□□ -0.34
TMEM116-218ENST00000552839 LARP1BQ659C4 914 aaKnown RBP12.95□□□□□ -0.34
TMEM116-218ENST00000552839 MCTP1Q6DN14 999 aa12.95□□□□□ -0.34
TMEM116-218ENST00000552839 POTEBQ6S5H4 581 aa12.95□□□□□ -0.34
TMEM116-218ENST00000552839 FCHSD1Q86WN1 690 aa12.95□□□□□ -0.34
TMEM116-218ENST00000552839 MYOCDQ8IZQ8 938 aa12.95□□□□□ -0.34
TMEM116-218ENST00000552839 REXO1Q8N1G1 1221 aaKnown RBP12.95□□□□□ -0.34
TMEM116-218ENST00000552839 DBF4BQ8NFT6 615 aa12.95□□□□□ -0.34
TMEM116-218ENST00000552839 SYTL5Q8TDW5 730 aaPredicted RBP12.95□□□□□ -0.34
TMEM116-218ENST00000552839 DDX41Q9UJV9 622 aaKnown RBP12.95□□□□□ -0.34
TMEM116-218ENST00000552839 RBM19Q9Y4C8 960 aaKnown RBP12.95□□□□□ -0.34
TMEM116-218ENST00000552839 MYO7AQ13402 2215 aa12.94□□□□□ -0.34
TMEM116-218ENST00000552839 RALGAPA2Q2PPJ7 1873 aa12.94□□□□□ -0.34
TMEM116-218ENST00000552839 CCDC194A0A1B0GVG4 234 aa12.94□□□□□ -0.34
TMEM116-218ENST00000552839 ESYT2A0FGR8 921 aa12.94□□□□□ -0.34
TMEM116-218ENST00000552839 DCXO43602 365 aa12.94□□□□□ -0.34
TMEM116-218ENST00000552839 F2P00734 622 aa12.94□□□□□ -0.34
TMEM116-218ENST00000552839 ZNF286BP0CG31 522 aa12.94□□□□□ -0.34
TMEM116-218ENST00000552839 HOXA13P31271 388 aaPredicted RBP12.94□□□□□ -0.34
TMEM116-218ENST00000552839 KRT2P35908 639 aa12.94□□□□□ -0.34
TMEM116-218ENST00000552839 STXBP2Q15833 593 aa12.94□□□□□ -0.34
TMEM116-218ENST00000552839 PUS10Q3MIT2 529 aaKnown RBP12.94□□□□□ -0.34
TMEM116-218ENST00000552839 EPC2Q52LR7 807 aa12.94□□□□□ -0.34
TMEM116-218ENST00000552839 ARHGEF16Q5VV41 709 aa12.94□□□□□ -0.34
TMEM116-218ENST00000552839 MCTP2Q6DN12 878 aa12.94□□□□□ -0.34
TMEM116-218ENST00000552839 GALNT17Q6IS24 598 aa12.94□□□□□ -0.34
TMEM116-218ENST00000552839 SAMD3Q8N6K7 520 aa12.94□□□□□ -0.34
TMEM116-218ENST00000552839 SP7Q8TDD2 431 aaPredicted RBP12.94□□□□□ -0.34
TMEM116-218ENST00000552839 NSUN6Q8TEA1 469 aaKnown RBP12.94□□□□□ -0.34
TMEM116-218ENST00000552839 FBXL18Q96ME1 805 aa12.94□□□□□ -0.34
TMEM116-218ENST00000552839 AIFM3Q96NN9 605 aa12.94□□□□□ -0.34
TMEM116-218ENST00000552839 IWS1Q96ST2 819 aa12.94□□□□□ -0.34
TMEM116-218ENST00000552839 KATNAL1Q9BW62 490 aa12.94□□□□□ -0.34
TMEM116-218ENST00000552839 RIC8AQ9NPQ8 531 aa12.94□□□□□ -0.34
TMEM116-218ENST00000552839 KCNJ14Q9UNX9 436 aa12.94□□□□□ -0.34
TMEM116-218ENST00000552839 AMHP03971 560 aa12.93□□□□□ -0.34
TMEM116-218ENST00000552839 UBE2SQ16763 222 aa12.93□□□□□ -0.34
TMEM116-218ENST00000552839 PTPROQ16827 1216 aa12.93□□□□□ -0.34
TMEM116-218ENST00000552839 TCEAL5Q5H9L2 206 aa12.93□□□□□ -0.34
TMEM116-218ENST00000552839 BLIDQ8IZY5 108 aa12.93□□□□□ -0.34
TMEM116-218ENST00000552839 BANK1Q8NDB2 785 aa12.93□□□□□ -0.34
TMEM116-218ENST00000552839 PPTC7Q8NI37 304 aa12.93□□□□□ -0.34
TMEM116-218ENST00000552839 EMID1Q96A84 441 aaPredicted RBP12.93□□□□□ -0.34
TMEM116-218ENST00000552839 RMDN3Q96TC7 470 aa12.93□□□□□ -0.34
TMEM116-218ENST00000552839 MAF1Q9H063 256 aa12.93□□□□□ -0.34
TMEM116-218ENST00000552839 MAP3K20Q9NYL2 800 aaKnown RBP12.93□□□□□ -0.34
TMEM116-218ENST00000552839 PCDHA4Q9UN74 947 aa12.93□□□□□ -0.34
TMEM116-218ENST00000552839 PIEZO1Q92508 2521 aa12.93□□□□□ -0.34
TMEM116-218ENST00000552839 EMSYQ7Z589 1322 aa12.92□□□□□ -0.34
TMEM116-218ENST00000552839 H3BNC9 293 aa12.92□□□□□ -0.34
TMEM116-218ENST00000552839 FOSP01100 380 aaPredicted RBP12.92□□□□□ -0.34
TMEM116-218ENST00000552839 FDPSP14324 419 aaKnown RBP12.92□□□□□ -0.34
TMEM116-218ENST00000552839 EIF2AK2P19525 551 aaKnown RBP12.92□□□□□ -0.34
TMEM116-218ENST00000552839 ZP2Q05996 745 aa12.92□□□□□ -0.34
TMEM116-218ENST00000552839 AP3B2Q13367 1082 aa12.92□□□□□ -0.34
TMEM116-218ENST00000552839 GPM6BQ13491 265 aa12.92□□□□□ -0.34
TMEM116-218ENST00000552839 LAMC2Q13753 1193 aa12.92□□□□□ -0.34
TMEM116-218ENST00000552839 COL19A1Q14993 1142 aa12.92□□□□□ -0.34
TMEM116-218ENST00000552839 TIGD5Q53EQ6 642 aa12.92□□□□□ -0.34
TMEM116-218ENST00000552839 PLEKHG4Q58EX7 1191 aa12.92□□□□□ -0.34
TMEM116-218ENST00000552839 JAKMIP3Q5VZ66 844 aa12.92□□□□□ -0.34
TMEM116-218ENST00000552839 USP17L6PQ6QN14 398 aa12.92□□□□□ -0.34
TMEM116-218ENST00000552839 EP400NLQ6ZTU2 488 aa12.92□□□□□ -0.34
TMEM116-218ENST00000552839 KRT25Q7Z3Z0 450 aa12.92□□□□□ -0.34
TMEM116-218ENST00000552839 TEX2Q8IWB9 1127 aa12.92□□□□□ -0.34
TMEM116-218ENST00000552839 DHX37Q8IY37 1157 aaKnown RBP12.92□□□□□ -0.34
TMEM116-218ENST00000552839 PABPC5Q96DU9 382 aaKnown RBP12.92□□□□□ -0.34
TMEM116-218ENST00000552839 SAMD11Q96NU1 681 aa12.92□□□□□ -0.34
TMEM116-218ENST00000552839 OSBPL7Q9BZF2 842 aa12.92□□□□□ -0.34
TMEM116-218ENST00000552839 ZMYND12Q9H0C1 365 aa12.92□□□□□ -0.34
TMEM116-218ENST00000552839 KCNH6Q9H252 994 aa12.92□□□□□ -0.34
TMEM116-218ENST00000552839 MRVI1Q9Y6F6 885 aa12.92□□□□□ -0.34
TMEM116-218ENST00000552839 ZNF318Q5VUA4 2279 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms