RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 MLXIPQ9HAP2 919 aa13.23□□□□□ -0.29
SUPT16H-202ENST00000552829 TOMM22Q9NS69 142 aa13.23□□□□□ -0.29
SUPT16H-202ENST00000552829 MAP3K20Q9NYL2 800 aaKnown RBP13.23□□□□□ -0.29
SUPT16H-202ENST00000552829 CEP250Q9BV73 2442 aa13.23□□□□□ -0.29
SUPT16H-202ENST00000552829 FNDC1Q4ZHG4 1894 aaPredicted RBP13.23□□□□□ -0.29
SUPT16H-202ENST00000552829 ZMYM6O95789 1325 aa13.22□□□□□ -0.29
SUPT16H-202ENST00000552829 PCP11498 1178 aaKnown RBP13.22□□□□□ -0.29
SUPT16H-202ENST00000552829 RBM10P98175 930 aaKnown RBP13.22□□□□□ -0.29
SUPT16H-202ENST00000552829 FBXO47Q5MNV8 452 aa13.22□□□□□ -0.29
SUPT16H-202ENST00000552829 RUFY4Q6ZNE9 571 aa13.22□□□□□ -0.29
SUPT16H-202ENST00000552829 RBM23Q86U06 439 aaKnown RBP13.22□□□□□ -0.29
SUPT16H-202ENST00000552829 SAMD3Q8N6K7 520 aa13.22□□□□□ -0.29
SUPT16H-202ENST00000552829 GPR20Q99678 358 aa13.22□□□□□ -0.29
SUPT16H-202ENST00000552829 TLE6Q9H808 572 aa13.22□□□□□ -0.29
SUPT16H-202ENST00000552829 BAZ2BQ9UIF8 2168 aaKnown RBP13.22□□□□□ -0.29
SUPT16H-202ENST00000552829 CCDC171Q6TFL3 1326 aa13.21□□□□□ -0.29
SUPT16H-202ENST00000552829 ARHGAP4P98171 946 aa13.21□□□□□ -0.29
SUPT16H-202ENST00000552829 SEMA3FQ13275 785 aa13.21□□□□□ -0.29
SUPT16H-202ENST00000552829 DUSP6Q16828 381 aa13.21□□□□□ -0.29
SUPT16H-202ENST00000552829 ASPRV1Q53RT3 343 aa13.21□□□□□ -0.29
SUPT16H-202ENST00000552829 FRMD5Q7Z6J6 570 aa13.21□□□□□ -0.29
SUPT16H-202ENST00000552829 TRIM50Q86XT4 487 aa13.21□□□□□ -0.29
SUPT16H-202ENST00000552829 ADSSL1Q8N142 457 aa13.21□□□□□ -0.29
SUPT16H-202ENST00000552829 PNMA1Q8ND90 353 aa13.21□□□□□ -0.29
SUPT16H-202ENST00000552829 OTUD7AQ8TE49 926 aaPredicted RBP13.21□□□□□ -0.29
SUPT16H-202ENST00000552829 NKD2Q969F2 451 aaPredicted RBP13.21□□□□□ -0.29
SUPT16H-202ENST00000552829 MTMR8Q96EF0 704 aa13.21□□□□□ -0.29
SUPT16H-202ENST00000552829 AGO3Q9H9G7 860 aaKnown RBP13.21□□□□□ -0.29
SUPT16H-202ENST00000552829 HELLSQ9NRZ9 838 aa13.21□□□□□ -0.29
SUPT16H-202ENST00000552829 TELO2Q9Y4R8 837 aa13.21□□□□□ -0.29
SUPT16H-202ENST00000552829 FRYLO94915 3013 aa13.21□□□□□ -0.3
SUPT16H-202ENST00000552829 NRCAMQ92823 1304 aa13.2□□□□□ -0.3
SUPT16H-202ENST00000552829 MBLAC1A4D2B0 266 aaPredicted RBP13.2□□□□□ -0.3
SUPT16H-202ENST00000552829 PER2O15055 1255 aa13.2□□□□□ -0.3
SUPT16H-202ENST00000552829 PPP1R11O60927 126 aaPredicted RBP13.2□□□□□ -0.3
SUPT16H-202ENST00000552829 KDM4AO75164 1064 aa13.2□□□□□ -0.3
SUPT16H-202ENST00000552829 UBE3AQ05086 875 aa13.2□□□□□ -0.3
SUPT16H-202ENST00000552829 TAF2Q6P1X5 1199 aa13.2□□□□□ -0.3
SUPT16H-202ENST00000552829 SYCE2Q6PIF2 218 aa13.2□□□□□ -0.3
SUPT16H-202ENST00000552829 METTL7BQ6UX53 244 aa13.2□□□□□ -0.3
SUPT16H-202ENST00000552829 TSHZ1Q6ZSZ6 1077 aa13.2□□□□□ -0.3
SUPT16H-202ENST00000552829 NPAS4Q8IUM7 802 aa13.2□□□□□ -0.3
SUPT16H-202ENST00000552829 TBC1D10CQ8IV04 446 aa13.2□□□□□ -0.3
SUPT16H-202ENST00000552829 UBALD2Q8IYN6 164 aa13.2□□□□□ -0.3
SUPT16H-202ENST00000552829 KREMEN2Q8NCW0 462 aa13.2□□□□□ -0.3
SUPT16H-202ENST00000552829 ZFP91Q96JP5 570 aaPredicted RBP13.2□□□□□ -0.3
SUPT16H-202ENST00000552829 INPP4AQ96PE3 977 aaPredicted RBP13.2□□□□□ -0.3
SUPT16H-202ENST00000552829 CDCA3Q99618 268 aaPredicted RBP13.2□□□□□ -0.3
SUPT16H-202ENST00000552829 PPP4R2Q9NY27 417 aa13.2□□□□□ -0.3
SUPT16H-202ENST00000552829 OTOGLQ3ZCN5 2332 aa13.19□□□□□ -0.3
SUPT16H-202ENST00000552829 FSD2A1L4K1 749 aa13.19□□□□□ -0.3
SUPT16H-202ENST00000552829 SPATA31C2B4DYI2 1134 aa13.19□□□□□ -0.3
SUPT16H-202ENST00000552829 STK25O00506 426 aa13.19□□□□□ -0.3
SUPT16H-202ENST00000552829 FSCN2O14926 492 aa13.19□□□□□ -0.3
SUPT16H-202ENST00000552829 BRD1O95696 1058 aa13.19□□□□□ -0.3
SUPT16H-202ENST00000552829 CCND2P30279 289 aa13.19□□□□□ -0.3
SUPT16H-202ENST00000552829 HOXA13P31271 388 aaPredicted RBP13.19□□□□□ -0.3
SUPT16H-202ENST00000552829 HAND2P61296 217 aa13.19□□□□□ -0.3
SUPT16H-202ENST00000552829 MRPS9P82933 396 aaKnown RBP13.19□□□□□ -0.3
SUPT16H-202ENST00000552829 ERICH6BQ5W0A0 696 aa13.19□□□□□ -0.3
SUPT16H-202ENST00000552829 ASTLQ6HA08 431 aaPredicted RBP13.19□□□□□ -0.3
SUPT16H-202ENST00000552829 MFSD6Q6ZSS7 791 aa13.19□□□□□ -0.3
SUPT16H-202ENST00000552829 RASGRP4Q8TDF6 673 aa13.19□□□□□ -0.3
SUPT16H-202ENST00000552829 FAM212AQ96EL1 285 aa13.19□□□□□ -0.3
SUPT16H-202ENST00000552829 NEK1Q96PY6 1258 aa13.19□□□□□ -0.3
SUPT16H-202ENST00000552829 ZKSCAN3Q9BRR0 538 aa13.19□□□□□ -0.3
SUPT16H-202ENST00000552829 AMNQ9BXJ7 453 aa13.19□□□□□ -0.3
SUPT16H-202ENST00000552829 SQORQ9Y6N5 450 aa13.19□□□□□ -0.3
SUPT16H-202ENST00000552829 FRMPD4Q14CM0 1322 aa13.18□□□□□ -0.3
SUPT16H-202ENST00000552829 SALL3Q9BXA9 1300 aa13.18□□□□□ -0.3
SUPT16H-202ENST00000552829 ACACBO00763 2458 aa13.18□□□□□ -0.3
SUPT16H-202ENST00000552829 MED19A0JLT2 244 aaPredicted RBP13.18□□□□□ -0.3
SUPT16H-202ENST00000552829 NOP56O00567 594 aaKnown RBP13.18□□□□□ -0.3
SUPT16H-202ENST00000552829 GATMP50440 423 aa13.18□□□□□ -0.3
SUPT16H-202ENST00000552829 ERVFC1P60507 584 aa13.18□□□□□ -0.3
SUPT16H-202ENST00000552829 NEDD9Q14511 834 aa13.18□□□□□ -0.3
SUPT16H-202ENST00000552829 PAN2Q504Q3 1202 aaKnown RBP13.18□□□□□ -0.3
SUPT16H-202ENST00000552829 MARCH8Q5T0T0 291 aa13.18□□□□□ -0.3
SUPT16H-202ENST00000552829 MCTP2Q6DN12 878 aa13.18□□□□□ -0.3
SUPT16H-202ENST00000552829 B4GALNT3Q6L9W6 998 aa13.18□□□□□ -0.3
SUPT16H-202ENST00000552829 ANKRD54Q6NXT1 300 aa13.18□□□□□ -0.3
SUPT16H-202ENST00000552829 CYFIP1Q7L576 1253 aa13.18□□□□□ -0.3
SUPT16H-202ENST00000552829 VAT1LQ9HCJ6 419 aa13.18□□□□□ -0.3
SUPT16H-202ENST00000552829 ZNF215Q9UL58 517 aaPredicted RBP13.18□□□□□ -0.3
SUPT16H-202ENST00000552829 SORCS3Q9UPU3 1222 aa13.18□□□□□ -0.3
SUPT16H-202ENST00000552829 CDY2AQ9Y6F7 541 aa13.18□□□□□ -0.3
SUPT16H-202ENST00000552829 NEDD4P46934 1319 aa13.17□□□□□ -0.3
SUPT16H-202ENST00000552829 A0A0D9SFI3 127 aa13.17□□□□□ -0.3
SUPT16H-202ENST00000552829 CD52P31358 61 aa13.17□□□□□ -0.3
SUPT16H-202ENST00000552829 NT5C2P49902 561 aa13.17□□□□□ -0.3
SUPT16H-202ENST00000552829 CLCN5P51795 746 aa13.17□□□□□ -0.3
SUPT16H-202ENST00000552829 CCDC178Q5BJE1 867 aa13.17□□□□□ -0.3
SUPT16H-202ENST00000552829 PDE12Q6L8Q7 609 aaKnown RBP13.17□□□□□ -0.3
SUPT16H-202ENST00000552829 RSPH3Q86UC2 560 aa13.17□□□□□ -0.3
SUPT16H-202ENST00000552829 SPDYE1Q8NFV5 336 aaPredicted RBP13.17□□□□□ -0.3
SUPT16H-202ENST00000552829 ESR2Q92731 530 aa13.17□□□□□ -0.3
SUPT16H-202ENST00000552829 FAM227BQ96M60 508 aa13.17□□□□□ -0.3
SUPT16H-202ENST00000552829 FTHL17Q9BXU8 183 aa13.17□□□□□ -0.3
SUPT16H-202ENST00000552829 PCDHA1Q9Y5I3 950 aa13.17□□□□□ -0.3
SUPT16H-202ENST00000552829 DNAH14Q0VDD8 3507 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms