RNA–Protein interactions for RNA: ENST00000552810.5

CEP290-207, Transcript of centrosomal protein 290, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CEP290, Length 7,948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-207ENST00000552810 RRM2BQ7LG56 351 aa8.37□□□□□ -1.07
CEP290-207ENST00000552810 RRP36Q96EU6 259 aaKnown RBP8.37□□□□□ -1.07
CEP290-207ENST00000552810 ACTR5Q9H9F9 607 aaPredicted RBP8.37□□□□□ -1.07
CEP290-207ENST00000552810 ZCCHC17Q9NP64 241 aaKnown RBP8.37□□□□□ -1.07
CEP290-207ENST00000552810 AP3D1O14617 1153 aa8.37□□□□□ -1.07
CEP290-207ENST00000552810 PIP5K1CO60331 668 aa8.37□□□□□ -1.07
CEP290-207ENST00000552810 LRRC49Q8IUZ0 686 aa8.37□□□□□ -1.07
CEP290-207ENST00000552810 FAM193BQ96PV7 902 aaPredicted RBP8.37□□□□□ -1.07
CEP290-207ENST00000552810 CARD10Q9BWT7 1032 aa8.37□□□□□ -1.07
CEP290-207ENST00000552810 ATP5DP30049 168 aa8.37□□□□□ -1.07
CEP290-207ENST00000552810 KIF19Q2TAC6 998 aa8.37□□□□□ -1.07
CEP290-207ENST00000552810 FAM47CQ5HY64 1035 aa8.37□□□□□ -1.07
CEP290-207ENST00000552810 CSRNP2Q9H175 543 aa8.37□□□□□ -1.07
CEP290-207ENST00000552810 CREB3O43889 395 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 SNX2O60749 519 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 ACTN1P12814 892 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 ASPHQ12797 758 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 ZNF280BQ86YH2 543 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 SARS2Q9NP81 518 aaKnown RBP8.36□□□□□ -1.07
CEP290-207ENST00000552810 DCTN4Q9UJW0 460 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 PIK3R2O00459 728 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 HEXIM1O94992 359 aaKnown RBP8.36□□□□□ -1.07
CEP290-207ENST00000552810 TCN1P20061 433 aaPredicted RBP8.36□□□□□ -1.07
CEP290-207ENST00000552810 SLC9C1Q4G0N8 1177 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 NUGGCQ68CJ6 796 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 SCARA3Q6AZY7 606 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 SCARA5Q6ZMJ2 495 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 EPB41L5Q9HCM4 733 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 SLC39A2Q9NP94 309 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 VPS54Q9P1Q0 977 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 PPP6R2O75170 966 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 PRPF6O94906 941 aaKnown RBP8.36□□□□□ -1.07
CEP290-207ENST00000552810 PLS3P13797 630 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 S100A1P23297 94 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 CDC25CP30307 473 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 TRPC1P48995 793 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 DMTNQ08495 405 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 CCDC127Q96BQ5 260 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 VPS35Q96QK1 796 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 PRPF18Q99633 342 aaKnown RBP8.36□□□□□ -1.07
CEP290-207ENST00000552810 SPTLC3Q9NUV7 552 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 ATPIF1Q9UII2 106 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 XPO1O14980 1071 aaKnown RBP8.36□□□□□ -1.07
CEP290-207ENST00000552810 RAD17O75943 681 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 LMBR1LQ6UX01 489 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 MSANTD1Q6ZTZ1 278 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 RTL3Q8N8U3 475 aaKnown RBP8.36□□□□□ -1.07
CEP290-207ENST00000552810 FTOQ9C0B1 505 aaKnown RBP eCLIP8.36□□□□□ -1.07
CEP290-207ENST00000552810 C6orf50Q9HD87 102 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 GINM1Q9NU53 330 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 H2AFY2Q9P0M6 372 aaPredicted RBP8.36□□□□□ -1.07
CEP290-207ENST00000552810 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.36□□□□□ -1.07
CEP290-207ENST00000552810 EXOC3O60645 756 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 MBD4O95243 580 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 SCP2P22307 547 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 LSP1P33241 339 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 YARSP54577 528 aaKnown RBP8.36□□□□□ -1.07
CEP290-207ENST00000552810 ZNF699Q32M78 642 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 ZRANB3Q5FWF4 1079 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 SLC35F6Q8N357 371 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 KIFC3Q9BVG8 833 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 JRKLQ9Y4A0 524 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 ARIH1Q9Y4X5 557 aaPredicted RBP8.36□□□□□ -1.07
CEP290-207ENST00000552810 ACTN4O43707 911 aaKnown RBP8.36□□□□□ -1.07
CEP290-207ENST00000552810 PRPSAP1Q14558 356 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 KCTD19Q17RG1 926 aaPredicted RBP8.36□□□□□ -1.07
CEP290-207ENST00000552810 MINDY4Q4G0A6 757 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 USP51Q70EK9 711 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 TSPYL6Q8N831 410 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 HEXDCQ8WVB3 486 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 HSPH1Q92598 858 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 RUBCNQ92622 972 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 SLC9A7Q96T83 725 aa8.36□□□□□ -1.07
CEP290-207ENST00000552810 MRPL44Q9H9J2 332 aaKnown RBP8.36□□□□□ -1.07
CEP290-207ENST00000552810 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.36□□□□□ -1.07
CEP290-207ENST00000552810 MFN2O95140 757 aa8.35□□□□□ -1.07
CEP290-207ENST00000552810 CDO1Q16878 200 aa8.35□□□□□ -1.07
CEP290-207ENST00000552810 KCNG4Q8TDN1 519 aa8.35□□□□□ -1.07
CEP290-207ENST00000552810 PRKAG2Q9UGJ0 569 aa8.35□□□□□ -1.07
CEP290-207ENST00000552810 AREL1O15033 823 aa8.35□□□□□ -1.07
CEP290-207ENST00000552810 LMNB1P20700 586 aa8.35□□□□□ -1.07
CEP290-207ENST00000552810 PAK2Q13177 524 aa8.35□□□□□ -1.07
CEP290-207ENST00000552810 ITGADQ13349 1161 aa8.35□□□□□ -1.07
CEP290-207ENST00000552810 SEPT2Q15019 361 aa8.35□□□□□ -1.07
CEP290-207ENST00000552810 CDKL3Q8IVW4 592 aaPredicted RBP8.35□□□□□ -1.07
CEP290-207ENST00000552810 UBL4BQ8N7F7 174 aa8.35□□□□□ -1.07
CEP290-207ENST00000552810 GPKOWQ92917 476 aaPredicted RBP eCLIP8.35□□□□□ -1.072e-6■■■■□ 25.2
CEP290-207ENST00000552810 CCNL2Q96S94 520 aaPredicted RBP8.35□□□□□ -1.07
CEP290-207ENST00000552810 CRNKL1Q9BZJ0 848 aaKnown RBP8.35□□□□□ -1.07
CEP290-207ENST00000552810 MAN1C1Q9NR34 630 aa8.35□□□□□ -1.07
CEP290-207ENST00000552810 CCPG1Q9ULG6 757 aa8.35□□□□□ -1.07
CEP290-207ENST00000552810 PJA2O43164 708 aa8.35□□□□□ -1.07
CEP290-207ENST00000552810 PRAMEP78395 509 aa8.35□□□□□ -1.07
CEP290-207ENST00000552810 PDE1BQ01064 536 aa8.35□□□□□ -1.07
CEP290-207ENST00000552810 PAK1Q13153 545 aa8.35□□□□□ -1.07
CEP290-207ENST00000552810 HERC4Q5GLZ8 1057 aaPredicted RBP8.35□□□□□ -1.07
CEP290-207ENST00000552810 SPOPLQ6IQ16 392 aa8.35□□□□□ -1.07
CEP290-207ENST00000552810 LRRC59Q96AG4 307 aaKnown RBP8.35□□□□□ -1.07
CEP290-207ENST00000552810 TMEM63CQ9P1W3 806 aa8.35□□□□□ -1.07
CEP290-207ENST00000552810 NFE2L3Q9Y4A8 694 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms