RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 ITGB1P05556 798 aa9.98□□□□□ -0.81
PRIM1-208ENST00000552590 UQCRFS1P1P0C7P4 283 aa9.98□□□□□ -0.81
PRIM1-208ENST00000552590 USP46P62068 366 aa9.98□□□□□ -0.81
PRIM1-208ENST00000552590 SESTD1Q86VW0 696 aa9.98□□□□□ -0.81
PRIM1-208ENST00000552590 KRI1Q8N9T8 703 aaKnown RBP9.98□□□□□ -0.81
PRIM1-208ENST00000552590 SPPL3Q8TCT6 385 aa9.98□□□□□ -0.81
PRIM1-208ENST00000552590 NEK1Q96PY6 1258 aa9.98□□□□□ -0.81
PRIM1-208ENST00000552590 ACAD9Q9H845 621 aa9.98□□□□□ -0.81
PRIM1-208ENST00000552590 ERVK-5Q9HDB9 667 aa9.98□□□□□ -0.81
PRIM1-208ENST00000552590 MCM9Q9NXL9 1143 aa9.98□□□□□ -0.81
PRIM1-208ENST00000552590 LIMD1Q9UGP4 676 aa9.98□□□□□ -0.81
PRIM1-208ENST00000552590 USP18Q9UMW8 372 aa9.98□□□□□ -0.81
PRIM1-208ENST00000552590 IL16Q14005 1332 aa9.97□□□□□ -0.81
PRIM1-208ENST00000552590 EMSYQ7Z589 1322 aa9.97□□□□□ -0.81
PRIM1-208ENST00000552590 HECTD1Q9ULT8 2610 aa9.97□□□□□ -0.81
PRIM1-208ENST00000552590 KINO60870 393 aaKnown RBP9.97□□□□□ -0.81
PRIM1-208ENST00000552590 PMLP29590 882 aa9.97□□□□□ -0.81
PRIM1-208ENST00000552590 SIX5Q8N196 739 aa9.97□□□□□ -0.81
PRIM1-208ENST00000552590 POF1BQ8WVV4 589 aa9.97□□□□□ -0.81
PRIM1-208ENST00000552590 OSBPL7Q9BZF2 842 aa9.97□□□□□ -0.81
PRIM1-208ENST00000552590 ADGRA3Q8IWK6 1321 aa9.96□□□□□ -0.81
PRIM1-208ENST00000552590 RAD50Q92878 1312 aa9.96□□□□□ -0.81
PRIM1-208ENST00000552590 LCTP09848 1927 aa9.96□□□□□ -0.81
PRIM1-208ENST00000552590 TGM1P22735 817 aa9.96□□□□□ -0.82
PRIM1-208ENST00000552590 CLCN1P35523 988 aa9.96□□□□□ -0.82
PRIM1-208ENST00000552590 RING1Q06587 406 aa9.96□□□□□ -0.82
PRIM1-208ENST00000552590 PTK7Q13308 1070 aa9.96□□□□□ -0.82
PRIM1-208ENST00000552590 SYCE2Q6PIF2 218 aa9.96□□□□□ -0.82
PRIM1-208ENST00000552590 SEPT8Q92599 483 aa9.96□□□□□ -0.82
PRIM1-208ENST00000552590 KAT2BQ92831 832 aa9.96□□□□□ -0.82
PRIM1-208ENST00000552590 PLVAPQ9BX97 442 aa9.96□□□□□ -0.82
PRIM1-208ENST00000552590 GPR108Q9NPR9 543 aa9.96□□□□□ -0.82
PRIM1-208ENST00000552590 RNF146Q9NTX7 359 aa9.96□□□□□ -0.82
PRIM1-208ENST00000552590 HDAC6Q9UBN7 1215 aa9.96□□□□□ -0.82
PRIM1-208ENST00000552590 GTF2IRD1Q9UHL9 959 aa9.96□□□□□ -0.82
PRIM1-208ENST00000552590 TENM4Q6N022 2769 aa9.96□□□□□ -0.82
PRIM1-208ENST00000552590 ZNF462Q96JM2 2506 aa9.95□□□□□ -0.82
PRIM1-208ENST00000552590 RBM47A0AV96 593 aaKnown RBP9.95□□□□□ -0.82
PRIM1-208ENST00000552590 RSPH10B2B2RC85 870 aa9.95□□□□□ -0.82
PRIM1-208ENST00000552590 C1QTNF9BB2RNN3 333 aa9.95□□□□□ -0.82
PRIM1-208ENST00000552590 IDH1O75874 414 aaKnown RBP9.95□□□□□ -0.82
PRIM1-208ENST00000552590 C1QTNF9P0C862 333 aa9.95□□□□□ -0.82
PRIM1-208ENST00000552590 RSPH10BP0C881 870 aa9.95□□□□□ -0.82
PRIM1-208ENST00000552590 CD46P15529 392 aa9.95□□□□□ -0.82
PRIM1-208ENST00000552590 VARSP26640 1264 aaKnown RBP9.95□□□□□ -0.82
PRIM1-208ENST00000552590 TECP42680 631 aa9.95□□□□□ -0.82
PRIM1-208ENST00000552590 ZAP70P43403 619 aa9.95□□□□□ -0.82
PRIM1-208ENST00000552590 SHC2P98077 582 aa9.95□□□□□ -0.82
PRIM1-208ENST00000552590 BTG3Q14201 252 aaPredicted RBP9.95□□□□□ -0.82
PRIM1-208ENST00000552590 SPECC1Q5M775 1068 aa9.95□□□□□ -0.82
PRIM1-208ENST00000552590 RNFT1Q5M7Z0 435 aa9.95□□□□□ -0.82
PRIM1-208ENST00000552590 ANKRD54Q6NXT1 300 aa9.95□□□□□ -0.82
PRIM1-208ENST00000552590 CERS3Q8IU89 383 aa9.95□□□□□ -0.82
PRIM1-208ENST00000552590 KLHL23Q8NBE8 558 aa9.95□□□□□ -0.82
PRIM1-208ENST00000552590 MORC4Q8TE76 937 aa9.95□□□□□ -0.82
PRIM1-208ENST00000552590 P2RX5Q93086 422 aa9.95□□□□□ -0.82
PRIM1-208ENST00000552590 SPOCK3Q9BQ16 436 aa9.95□□□□□ -0.82
PRIM1-208ENST00000552590 POMKQ9H5K3 350 aa9.95□□□□□ -0.82
PRIM1-208ENST00000552590 KANSL2Q9H9L4 492 aa9.95□□□□□ -0.82
PRIM1-208ENST00000552590 PARD6AQ9NPB6 346 aa9.95□□□□□ -0.82
PRIM1-208ENST00000552590 SWAP70Q9UH65 585 aa9.95□□□□□ -0.82
PRIM1-208ENST00000552590 FBXL21Q9UKT6 434 aa9.95□□□□□ -0.82
PRIM1-208ENST00000552590 SLC30A4O14863 429 aa9.94□□□□□ -0.82
PRIM1-208ENST00000552590 NDUFB10O96000 172 aa9.94□□□□□ -0.82
PRIM1-208ENST00000552590 THPOP40225 353 aa9.94□□□□□ -0.82
PRIM1-208ENST00000552590 OAZ1P54368 228 aa9.94□□□□□ -0.82
PRIM1-208ENST00000552590 PPP2R5BQ15173 497 aa9.94□□□□□ -0.82
PRIM1-208ENST00000552590 PLA2G4EQ3MJ16 856 aa9.94□□□□□ -0.82
PRIM1-208ENST00000552590 TTC39AQ5SRH9 613 aa9.94□□□□□ -0.82
PRIM1-208ENST00000552590 LURAP1LQ8IV03 231 aa9.94□□□□□ -0.82
PRIM1-208ENST00000552590 Q8N3U1 123 aa9.94□□□□□ -0.82
PRIM1-208ENST00000552590 C7orf31Q8N865 590 aa9.94□□□□□ -0.82
PRIM1-208ENST00000552590 MICAL1Q8TDZ2 1067 aa9.94□□□□□ -0.82
PRIM1-208ENST00000552590 RC3H2Q9HBD1 1191 aaKnown RBP9.94□□□□□ -0.82
PRIM1-208ENST00000552590 CYP39A1Q9NYL5 469 aa9.94□□□□□ -0.82
PRIM1-208ENST00000552590 KIAA1671Q9BY89 1806 aa9.93□□□□□ -0.82
PRIM1-208ENST00000552590 F5H6K3 240 aa9.93□□□□□ -0.82
PRIM1-208ENST00000552590 MMP3P08254 477 aa9.93□□□□□ -0.82
PRIM1-208ENST00000552590 UBTFL1P0CB47 393 aaPredicted RBP9.93□□□□□ -0.82
PRIM1-208ENST00000552590 PDE4BQ07343 736 aa9.93□□□□□ -0.82
PRIM1-208ENST00000552590 KLRC3Q07444 240 aa9.93□□□□□ -0.82
PRIM1-208ENST00000552590 DUSP6Q16828 381 aa9.93□□□□□ -0.82
PRIM1-208ENST00000552590 N4BP2L1Q5TBK1 243 aaPredicted RBP9.93□□□□□ -0.82
PRIM1-208ENST00000552590 LRRC47Q8N1G4 583 aaKnown RBP9.93□□□□□ -0.82
PRIM1-208ENST00000552590 CCDC17Q96LX7 622 aa9.93□□□□□ -0.82
PRIM1-208ENST00000552590 TRERF1Q96PN7 1200 aa9.93□□□□□ -0.82
PRIM1-208ENST00000552590 RIOK1Q9BRS2 568 aaKnown RBP9.93□□□□□ -0.82
PRIM1-208ENST00000552590 ALG1Q9BT22 464 aa9.93□□□□□ -0.82
PRIM1-208ENST00000552590 DNMT3LQ9UJW3 386 aa9.93□□□□□ -0.82
PRIM1-208ENST00000552590 PLXNA4Q9HCM2 1894 aa9.93□□□□□ -0.82
PRIM1-208ENST00000552590 TAF4O00268 1085 aa9.92□□□□□ -0.82
PRIM1-208ENST00000552590 NKRFO15226 690 aaKnown RBP eCLIP9.92□□□□□ -0.82
PRIM1-208ENST00000552590 DCNP07585 359 aaKnown RBP9.92□□□□□ -0.82
PRIM1-208ENST00000552590 BMP2P12643 396 aa9.92□□□□□ -0.82
PRIM1-208ENST00000552590 ALAS1P13196 640 aa9.92□□□□□ -0.82
PRIM1-208ENST00000552590 TBC1D8BQ0IIM8 1120 aa9.92□□□□□ -0.82
PRIM1-208ENST00000552590 MUM1L1Q5H9M0 696 aa9.92□□□□□ -0.82
PRIM1-208ENST00000552590 LLGL2Q6P1M3 1020 aa9.92□□□□□ -0.82
PRIM1-208ENST00000552590 C1orf210Q8IVY1 113 aa9.92□□□□□ -0.82
PRIM1-208ENST00000552590 SDR42E1Q8WUS8 393 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms