RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 MYH7BA7E2Y1 1941 aa19.61■□□□□ 0.73
CDK4-208ENST00000551706 MYO9BQ13459 2157 aa19.6■□□□□ 0.73
CDK4-208ENST00000551706 EMSYQ7Z589 1322 aa19.6■□□□□ 0.73
CDK4-208ENST00000551706 MSH4O15457 936 aa19.6■□□□□ 0.73
CDK4-208ENST00000551706 DHX15O43143 795 aaKnown RBP19.6■□□□□ 0.73
CDK4-208ENST00000551706 GJB2P29033 226 aa19.6■□□□□ 0.73
CDK4-208ENST00000551706 PBX2P40425 430 aa19.6■□□□□ 0.73
CDK4-208ENST00000551706 KRT76Q01546 638 aa19.6■□□□□ 0.73
CDK4-208ENST00000551706 GNL2Q13823 731 aaKnown RBP19.6■□□□□ 0.73
CDK4-208ENST00000551706 UTP14CQ5TAP6 766 aaKnown RBP19.6■□□□□ 0.73
CDK4-208ENST00000551706 ZNF746Q6NUN9 644 aaPredicted RBP19.6■□□□□ 0.73
CDK4-208ENST00000551706 SMAP1Q8IYB5 467 aaPredicted RBP19.6■□□□□ 0.73
CDK4-208ENST00000551706 SNX21Q969T3 373 aa19.6■□□□□ 0.73
CDK4-208ENST00000551706 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.6■□□□□ 0.73
CDK4-208ENST00000551706 SMARCAD1Q9H4L7 1026 aa19.6■□□□□ 0.73
CDK4-208ENST00000551706 AZI2Q9H6S1 392 aa19.6■□□□□ 0.73
CDK4-208ENST00000551706 TBX21Q9UL17 535 aa19.6■□□□□ 0.73
CDK4-208ENST00000551706 K7ELQ4 463 aaPredicted RBP19.59■□□□□ 0.73
CDK4-208ENST00000551706 DDX39AO00148 427 aaKnown RBP19.59■□□□□ 0.73
CDK4-208ENST00000551706 CCNT1O60563 726 aaKnown RBP19.59■□□□□ 0.73
CDK4-208ENST00000551706 LGR5O75473 907 aa19.59■□□□□ 0.73
CDK4-208ENST00000551706 ATG7O95352 703 aa19.59■□□□□ 0.73
CDK4-208ENST00000551706 IGFBP4P22692 258 aa19.59■□□□□ 0.73
CDK4-208ENST00000551706 ADGRE1Q14246 886 aa19.59■□□□□ 0.73
CDK4-208ENST00000551706 EARS2Q5JPH6 523 aaKnown RBP19.59■□□□□ 0.73
CDK4-208ENST00000551706 GLG1Q92896 1179 aa19.59■□□□□ 0.73
CDK4-208ENST00000551706 SLC5A5Q92911 643 aa19.59■□□□□ 0.73
CDK4-208ENST00000551706 NECAB3Q96P71 396 aaPredicted RBP19.59■□□□□ 0.73
CDK4-208ENST00000551706 TRPV6Q9H1D0 765 aa19.59■□□□□ 0.73
CDK4-208ENST00000551706 ERAP1Q9NZ08 941 aa19.59■□□□□ 0.73
CDK4-208ENST00000551706 GTF2IRD1Q9UHL9 959 aa19.59■□□□□ 0.73
CDK4-208ENST00000551706 TELO2Q9Y4R8 837 aa19.59■□□□□ 0.73
CDK4-208ENST00000551706 XIRP2A4UGR9 3374 aa19.58■□□□□ 0.73
CDK4-208ENST00000551706 GRXCR1A8MXD5 290 aa19.58■□□□□ 0.72
CDK4-208ENST00000551706 GAS7O60861 476 aa19.58■□□□□ 0.72
CDK4-208ENST00000551706 CCNE2O96020 404 aa19.58■□□□□ 0.72
CDK4-208ENST00000551706 LRCH2Q5VUJ6 765 aa19.58■□□□□ 0.72
CDK4-208ENST00000551706 MIS18BP1Q6P0N0 1132 aa19.58■□□□□ 0.72
CDK4-208ENST00000551706 TRIM50Q86XT4 487 aa19.58■□□□□ 0.72
CDK4-208ENST00000551706 TNPO1Q92973 898 aaKnown RBP19.58■□□□□ 0.72
CDK4-208ENST00000551706 INTS4Q96HW7 963 aaKnown RBP19.58■□□□□ 0.72
CDK4-208ENST00000551706 FAM20AQ96MK3 541 aa19.58■□□□□ 0.72
CDK4-208ENST00000551706 TEKT3Q9BXF9 490 aa19.58■□□□□ 0.72
CDK4-208ENST00000551706 TSPYL2Q9H2G4 693 aaPredicted RBP19.58■□□□□ 0.72
CDK4-208ENST00000551706 TRMT13Q9NUP7 481 aaKnown RBP19.58■□□□□ 0.72
CDK4-208ENST00000551706 HDAC6Q9UBN7 1215 aa19.58■□□□□ 0.72
CDK4-208ENST00000551706 NOD1Q9Y239 953 aa19.58■□□□□ 0.72
CDK4-208ENST00000551706 FAM205CA6NFA0 338 aa19.57■□□□□ 0.72
CDK4-208ENST00000551706 H3BQV1 296 aa19.57■□□□□ 0.72
CDK4-208ENST00000551706 TBX3O15119 743 aa19.57■□□□□ 0.72
CDK4-208ENST00000551706 TIMP1P01033 207 aa19.57■□□□□ 0.72
CDK4-208ENST00000551706 SLC26A2P50443 739 aa19.57■□□□□ 0.72
CDK4-208ENST00000551706 PTGISQ16647 500 aa19.57■□□□□ 0.72
CDK4-208ENST00000551706 FAM160B1Q5W0V3 765 aa19.57■□□□□ 0.72
CDK4-208ENST00000551706 ABHD15Q6UXT9 468 aa19.57■□□□□ 0.72
CDK4-208ENST00000551706 PLPPR4Q7Z2D5 763 aa19.57■□□□□ 0.72
CDK4-208ENST00000551706 NOSTRINQ8IVI9 506 aa19.57■□□□□ 0.72
CDK4-208ENST00000551706 ETNPPLQ8TBG4 499 aa19.57■□□□□ 0.72
CDK4-208ENST00000551706 UIMC1Q96RL1 719 aa19.57■□□□□ 0.72
CDK4-208ENST00000551706 CXXC1Q9P0U4 656 aaPredicted RBP19.57■□□□□ 0.72
CDK4-208ENST00000551706 TCF20Q9UGU0 1960 aaKnown RBP19.57■□□□□ 0.72
CDK4-208ENST00000551706 IGKV6D-21A0A0A0MT36 114 aa19.56■□□□□ 0.72
CDK4-208ENST00000551706 WDR64B1ANS9 1081 aa19.56■□□□□ 0.72
CDK4-208ENST00000551706 BACH1O14867 736 aa19.56■□□□□ 0.72
CDK4-208ENST00000551706 SLC37A4O43826 429 aa19.56■□□□□ 0.72
CDK4-208ENST00000551706 PSMD10O75832 226 aa19.56■□□□□ 0.72
CDK4-208ENST00000551706 SMIM10L2AP0DMW4 78 aa19.56■□□□□ 0.72
CDK4-208ENST00000551706 SMIM10L2BP0DMW5 78 aa19.56■□□□□ 0.72
CDK4-208ENST00000551706 GNAT1P11488 350 aa19.56■□□□□ 0.72
CDK4-208ENST00000551706 BMP1P13497 986 aa19.56■□□□□ 0.72
CDK4-208ENST00000551706 U2AF2P26368 475 aaKnown RBP eCLIP19.56■□□□□ 0.72
CDK4-208ENST00000551706 SFNP31947 248 aa19.56■□□□□ 0.72
CDK4-208ENST00000551706 STAT5BP51692 787 aa19.56■□□□□ 0.72
CDK4-208ENST00000551706 GDF6Q6KF10 455 aaPredicted RBP19.56■□□□□ 0.72
CDK4-208ENST00000551706 MFSD5Q6N075 450 aa19.56■□□□□ 0.72
CDK4-208ENST00000551706 HSCBQ8IWL3 235 aa19.56■□□□□ 0.72
CDK4-208ENST00000551706 RDM1Q8NG50 284 aa19.56■□□□□ 0.72
CDK4-208ENST00000551706 HIPK3Q9H422 1215 aa19.56■□□□□ 0.72
CDK4-208ENST00000551706 KCNMB3Q9NPA1 279 aa19.56■□□□□ 0.72
CDK4-208ENST00000551706 PCDHA10Q9Y5I2 948 aa19.56■□□□□ 0.72
CDK4-208ENST00000551706 C17orf102A2RUQ5 167 aa19.55■□□□□ 0.72
CDK4-208ENST00000551706 MARCH6O60337 910 aa19.55■□□□□ 0.72
CDK4-208ENST00000551706 BAG4O95429 457 aaKnown RBP19.55■□□□□ 0.72
CDK4-208ENST00000551706 PSAPP07602 524 aa19.55■□□□□ 0.72
CDK4-208ENST00000551706 PDCP20941 246 aa19.55■□□□□ 0.72
CDK4-208ENST00000551706 TRAPPC10P48553 1259 aa19.55■□□□□ 0.72
CDK4-208ENST00000551706 JAK3P52333 1124 aa19.55■□□□□ 0.72
CDK4-208ENST00000551706 ORC2Q13416 577 aaPredicted RBP19.55■□□□□ 0.72
CDK4-208ENST00000551706 PPIGQ13427 754 aaKnown RBP eCLIP19.55■□□□□ 0.72
CDK4-208ENST00000551706 TMEM240Q5SV17 173 aa19.55■□□□□ 0.72
CDK4-208ENST00000551706 RASIP1Q5U651 963 aa19.55■□□□□ 0.72
CDK4-208ENST00000551706 LARP1BQ659C4 914 aaKnown RBP19.55■□□□□ 0.72
CDK4-208ENST00000551706 C16orf59Q7L2K0 433 aa19.55■□□□□ 0.72
CDK4-208ENST00000551706 SLFN12Q8IYM2 578 aa19.55■□□□□ 0.72
CDK4-208ENST00000551706 CCDC155Q8N6L0 562 aa19.55■□□□□ 0.72
CDK4-208ENST00000551706 AFAP1L1Q8TED9 768 aa19.55■□□□□ 0.72
CDK4-208ENST00000551706 PPP1R13LQ8WUF5 828 aa19.55■□□□□ 0.72
CDK4-208ENST00000551706 PCYT2Q99447 389 aa19.55■□□□□ 0.72
CDK4-208ENST00000551706 LRFN3Q9BTN0 628 aa19.55■□□□□ 0.72
CDK4-208ENST00000551706 MSRAQ9UJ68 235 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms