RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 STXBP5LQ9Y2K9 1186 aa21.55■■□□□ 1.04
DDX54-208ENST00000551344 SCN5AQ14524 2016 aa21.55■■□□□ 1.04
DDX54-208ENST00000551344 DDX39AO00148 427 aaKnown RBP21.54■■□□□ 1.04
DDX54-208ENST00000551344 ATP2A2P16615 1042 aaKnown RBP21.54■■□□□ 1.04
DDX54-208ENST00000551344 GRIK4Q16099 956 aa21.54■■□□□ 1.04
DDX54-208ENST00000551344 ZNF746Q6NUN9 644 aaPredicted RBP21.54■■□□□ 1.04
DDX54-208ENST00000551344 MIS18BP1Q6P0N0 1132 aa21.54■■□□□ 1.04
DDX54-208ENST00000551344 CNKSR3Q6P9H4 555 aa21.54■■□□□ 1.04
DDX54-208ENST00000551344 RPAINQ86UA6 219 aa21.54■■□□□ 1.04
DDX54-208ENST00000551344 LENG9Q96B70 501 aa21.54■■□□□ 1.04
DDX54-208ENST00000551344 FAM161BQ96MY7 647 aa21.54■■□□□ 1.04
DDX54-208ENST00000551344 KCNJ14Q9UNX9 436 aa21.54■■□□□ 1.04
DDX54-208ENST00000551344 KAT6AQ92794 2004 aa21.53■■□□□ 1.04
DDX54-208ENST00000551344 CYP3A7-CYP3A51PA0A087WV96 503 aa21.53■■□□□ 1.04
DDX54-208ENST00000551344 MBLAC1A4D2B0 266 aaPredicted RBP21.53■■□□□ 1.04
DDX54-208ENST00000551344 INSRRP14616 1297 aa21.53■■□□□ 1.04
DDX54-208ENST00000551344 CYP3A7P24462 503 aa21.53■■□□□ 1.04
DDX54-208ENST00000551344 PBX2P40425 430 aa21.53■■□□□ 1.04
DDX54-208ENST00000551344 KRT76Q01546 638 aa21.53■■□□□ 1.04
DDX54-208ENST00000551344 FAM160B1Q5W0V3 765 aa21.53■■□□□ 1.04
DDX54-208ENST00000551344 KRT25Q7Z3Z0 450 aa21.53■■□□□ 1.04
DDX54-208ENST00000551344 SMAP1Q8IYB5 467 aaPredicted RBP21.53■■□□□ 1.04
DDX54-208ENST00000551344 GUCD1Q96NT3 240 aa21.53■■□□□ 1.04
DDX54-208ENST00000551344 SLC9A7Q96T83 725 aa21.53■■□□□ 1.04
DDX54-208ENST00000551344 TCEAL9Q9UHQ7 104 aa21.53■■□□□ 1.04
DDX54-208ENST00000551344 TET1Q8NFU7 2136 aa21.53■■□□□ 1.04
DDX54-208ENST00000551344 ABHD14A-ACY1A0A1B0GW23 586 aa21.52■■□□□ 1.04
DDX54-208ENST00000551344 BACH1O14867 736 aa21.52■■□□□ 1.04
DDX54-208ENST00000551344 EFCAB14O75071 495 aa21.52■■□□□ 1.04
DDX54-208ENST00000551344 LARGE1O95461 756 aa21.52■■□□□ 1.04
DDX54-208ENST00000551344 RPLP2P05387 115 aaKnown RBP21.52■■□□□ 1.04
DDX54-208ENST00000551344 FDPSP14324 419 aaKnown RBP21.52■■□□□ 1.04
DDX54-208ENST00000551344 MBTPS1Q14703 1052 aa21.52■■□□□ 1.04
DDX54-208ENST00000551344 PLCB4Q15147 1175 aa21.52■■□□□ 1.04
DDX54-208ENST00000551344 NONOQ15233 471 aaKnown RBP eCLIP21.52■■□□□ 1.04
DDX54-208ENST00000551344 Q4G0T1 1027 aa21.52■■□□□ 1.04
DDX54-208ENST00000551344 FAM26DQ5JW98 314 aa21.52■■□□□ 1.04
DDX54-208ENST00000551344 MARCH8Q5T0T0 291 aa21.52■■□□□ 1.04
DDX54-208ENST00000551344 MOXD1Q6UVY6 613 aa21.52■■□□□ 1.04
DDX54-208ENST00000551344 RIT2Q99578 217 aa21.52■■□□□ 1.04
DDX54-208ENST00000551344 ZNF576Q9H609 170 aa21.52■■□□□ 1.04
DDX54-208ENST00000551344 TUBE1Q9UJT0 475 aa21.52■■□□□ 1.04
DDX54-208ENST00000551344 LIMCH1Q9UPQ0 1083 aa21.52■■□□□ 1.04
DDX54-208ENST00000551344 TRPC6Q9Y210 931 aa21.52■■□□□ 1.04
DDX54-208ENST00000551344 TANC1Q9C0D5 1861 aa21.52■■□□□ 1.03
DDX54-208ENST00000551344 POTEB3A0JP26 581 aa21.51■■□□□ 1.03
DDX54-208ENST00000551344 MSH4O15457 936 aa21.51■■□□□ 1.03
DDX54-208ENST00000551344 IKBKEQ14164 716 aa21.51■■□□□ 1.03
DDX54-208ENST00000551344 SWSAP1Q6NVH7 229 aa21.51■■□□□ 1.03
DDX54-208ENST00000551344 POTEBQ6S5H4 581 aa21.51■■□□□ 1.03
DDX54-208ENST00000551344 RSPH3Q86UC2 560 aa21.51■■□□□ 1.03
DDX54-208ENST00000551344 NSUN7Q8NE18 718 aaKnown RBP21.51■■□□□ 1.03
DDX54-208ENST00000551344 UIMC1Q96RL1 719 aa21.51■■□□□ 1.03
DDX54-208ENST00000551344 CDX2Q99626 313 aaPredicted RBP21.51■■□□□ 1.03
DDX54-208ENST00000551344 ZNF302Q9NR11 478 aa21.51■■□□□ 1.03
DDX54-208ENST00000551344 PCDHA11Q9Y5I1 949 aa21.51■■□□□ 1.03
DDX54-208ENST00000551344 PCDHA10Q9Y5I2 948 aa21.51■■□□□ 1.03
DDX54-208ENST00000551344 CCDC194A0A1B0GVG4 234 aa21.5■■□□□ 1.03
DDX54-208ENST00000551344 HBP1O60381 514 aa21.5■■□□□ 1.03
DDX54-208ENST00000551344 KCNJ6P48051 423 aa21.5■■□□□ 1.03
DDX54-208ENST00000551344 RBM25P49756 843 aaKnown RBP21.5■■□□□ 1.03
DDX54-208ENST00000551344 PDXDC2PQ6P474 469 aa21.5■■□□□ 1.03
DDX54-208ENST00000551344 CCDC60Q8IWA6 550 aaPredicted RBP21.5■■□□□ 1.03
DDX54-208ENST00000551344 SLC5A5Q92911 643 aa21.5■■□□□ 1.03
DDX54-208ENST00000551344 MBOAT7Q96N66 472 aa21.5■■□□□ 1.03
DDX54-208ENST00000551344 KIF2CQ99661 725 aa21.5■■□□□ 1.03
DDX54-208ENST00000551344 KIF28PB7ZC32 967 aa21.49■■□□□ 1.03
DDX54-208ENST00000551344 PSAPP07602 524 aa21.49■■□□□ 1.03
DDX54-208ENST00000551344 RABGGTBP53611 331 aa21.49■■□□□ 1.03
DDX54-208ENST00000551344 IGBP1P78318 339 aa21.49■■□□□ 1.03
DDX54-208ENST00000551344 PLEKHG4Q58EX7 1191 aa21.49■■□□□ 1.03
DDX54-208ENST00000551344 RUFY4Q6ZNE9 571 aa21.49■■□□□ 1.03
DDX54-208ENST00000551344 DBF4BQ8NFT6 615 aa21.49■■□□□ 1.03
DDX54-208ENST00000551344 ATP8B4Q8TF62 1192 aa21.49■■□□□ 1.03
DDX54-208ENST00000551344 SLC28A3Q9HAS3 691 aa21.49■■□□□ 1.03
DDX54-208ENST00000551344 GJB4Q9NTQ9 266 aa21.49■■□□□ 1.03
DDX54-208ENST00000551344 MAFBQ9Y5Q3 323 aaPredicted RBP21.49■■□□□ 1.03
DDX54-208ENST00000551344 WDR64B1ANS9 1081 aa21.48■■□□□ 1.03
DDX54-208ENST00000551344 GAS7O60861 476 aa21.48■■□□□ 1.03
DDX54-208ENST00000551344 DTNBO60941 627 aa21.48■■□□□ 1.03
DDX54-208ENST00000551344 CTSHP09668 335 aa21.48■■□□□ 1.03
DDX54-208ENST00000551344 WDR5P61964 334 aaKnown RBP21.48■■□□□ 1.03
DDX54-208ENST00000551344 INF2Q27J81 1249 aa21.48■■□□□ 1.03
DDX54-208ENST00000551344 HERC6Q8IVU3 1022 aa21.48■■□□□ 1.03
DDX54-208ENST00000551344 DNAJB3Q8WWF6 145 aa21.48■■□□□ 1.03
DDX54-208ENST00000551344 ZSCAN31Q96LW9 406 aaPredicted RBP21.48■■□□□ 1.03
DDX54-208ENST00000551344 YBX2Q9Y2T7 364 aaKnown RBP21.48■■□□□ 1.03
DDX54-208ENST00000551344 PCDHA2Q9Y5H9 948 aa21.48■■□□□ 1.03
DDX54-208ENST00000551344 TDP2O95551 362 aa21.47■■□□□ 1.03
DDX54-208ENST00000551344 CHRNA1P02708 482 aa21.47■■□□□ 1.03
DDX54-208ENST00000551344 SFNP31947 248 aa21.47■■□□□ 1.03
DDX54-208ENST00000551344 GRIN2CQ14957 1233 aa21.47■■□□□ 1.03
DDX54-208ENST00000551344 ZNF484Q5JVG2 852 aa21.47■■□□□ 1.03
DDX54-208ENST00000551344 LRCH2Q5VUJ6 765 aa21.47■■□□□ 1.03
DDX54-208ENST00000551344 PPP4R3AQ6IN85 833 aa21.47■■□□□ 1.03
DDX54-208ENST00000551344 IL27Q8NEV9 243 aa21.47■■□□□ 1.03
DDX54-208ENST00000551344 BBXQ8WY36 941 aaPredicted RBP21.47■■□□□ 1.03
DDX54-208ENST00000551344 SEPT8Q92599 483 aa21.47■■□□□ 1.03
DDX54-208ENST00000551344 TEKT3Q9BXF9 490 aa21.47■■□□□ 1.03
DDX54-208ENST00000551344 NKX2-4Q9H2Z4 354 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms