RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 TANGO6Q9C0B7 1094 aa7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 RPAP3Q9H6T3 665 aaPredicted RBP7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 PRDM6Q9NQX0 595 aa7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 MTMR10Q9NXD2 777 aa7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 ZDHHC3Q9NYG2 299 aa7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 ORC3Q9UBD5 711 aaPredicted RBP7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 CLIP2Q9UDT6 1046 aa7.1□□□□□ -1.27
DEPDC4-209ENST00000550587 GREB1LQ9C091 1923 aaPredicted RBP7.09□□□□□ -1.27
DEPDC4-209ENST00000550587 PFASO15067 1338 aa7.09□□□□□ -1.27
DEPDC4-209ENST00000550587 STK36Q9NRP7 1315 aa7.09□□□□□ -1.27
DEPDC4-209ENST00000550587 PALM3A6NDB9 673 aaPredicted RBP7.09□□□□□ -1.27
DEPDC4-209ENST00000550587 PRPF3O43395 683 aaKnown RBP7.09□□□□□ -1.27
DEPDC4-209ENST00000550587 HOXC6P09630 235 aa7.09□□□□□ -1.27
DEPDC4-209ENST00000550587 CHRNA4P43681 627 aa7.09□□□□□ -1.27
DEPDC4-209ENST00000550587 PKP1Q13835 747 aa7.09□□□□□ -1.27
DEPDC4-209ENST00000550587 GRB14Q14449 540 aa7.09□□□□□ -1.27
DEPDC4-209ENST00000550587 GRM4Q14833 912 aa7.09□□□□□ -1.27
DEPDC4-209ENST00000550587 FAM109BQ6ICB4 259 aaPredicted RBP7.09□□□□□ -1.27
DEPDC4-209ENST00000550587 Q7L0L9 218 aa7.09□□□□□ -1.27
DEPDC4-209ENST00000550587 CD163Q86VB7 1156 aa7.09□□□□□ -1.27
DEPDC4-209ENST00000550587 NCAPG2Q86XI2 1143 aa7.09□□□□□ -1.27
DEPDC4-209ENST00000550587 RAB11FIP4Q86YS3 637 aa7.09□□□□□ -1.27
DEPDC4-209ENST00000550587 SIAH1Q8IUQ4 282 aa7.09□□□□□ -1.27
DEPDC4-209ENST00000550587 CCDC144CPQ8IYA2 1237 aa7.09□□□□□ -1.27
DEPDC4-209ENST00000550587 FBXO18Q8NFZ0 1043 aa7.09□□□□□ -1.27
DEPDC4-209ENST00000550587 ZDHHC1Q8WTX9 485 aa7.09□□□□□ -1.27
DEPDC4-209ENST00000550587 WASF1Q92558 559 aa7.09□□□□□ -1.27
DEPDC4-209ENST00000550587 RNF26Q9BY78 433 aaPredicted RBP7.09□□□□□ -1.27
DEPDC4-209ENST00000550587 MROH8Q9H579 483 aa7.09□□□□□ -1.27
DEPDC4-209ENST00000550587 SYNPO2Q9UMS6 1093 aa7.09□□□□□ -1.27
DEPDC4-209ENST00000550587 MTMR6Q9Y217 621 aa7.09□□□□□ -1.27
DEPDC4-209ENST00000550587 ATP11BQ9Y2G3 1177 aa7.09□□□□□ -1.27
DEPDC4-209ENST00000550587 ATP6V1DQ9Y5K8 247 aa7.09□□□□□ -1.27
DEPDC4-209ENST00000550587 BRCA2P51587 3418 aa7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 BAZ2BQ9UIF8 2168 aaKnown RBP7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 MYH4Q9Y623 1939 aa7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 H3BQV1 296 aa7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 PIK3R2O00459 728 aa7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 PEX10O60683 326 aa7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 DTNBO60941 627 aa7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 FLOT1O75955 427 aa7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 DEXIO95424 95 aa7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 SLC25A27O95847 323 aa7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 PARP1P09874 1014 aaKnown RBP7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 FAM157BP0CG42 384 aa7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 SNHG28P0DPA3 235 aa7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 FCER1AP12319 257 aa7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 EEF2P13639 858 aaKnown RBP7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 ADORA2AP29274 412 aa7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 CYP2C19P33261 490 aa7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 GUCY1A2P33402 732 aa7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 RTP1P59025 263 aa7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 JAG1P78504 1218 aa7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 AKAP17AQ02040 695 aaKnown RBP7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 SEPT2Q15019 361 aa7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 OLFML2BQ68BL8 750 aa7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 SLC39A5Q6ZMH5 540 aa7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 TMTC3Q6ZXV5 915 aa7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 ABRAQ8N0Z2 381 aa7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 SRBD1Q8N5C6 995 aaKnown RBP7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 SHCBP1Q8NEM2 672 aa7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 PHKBQ93100 1093 aa7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 GBP4Q96PP9 640 aa7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 SLC26A6Q9BXS9 759 aa7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 SPATC1LQ9H0A9 340 aa7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 ZSCAN16Q9H4T2 348 aaPredicted RBP7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 PRDM5Q9NQX1 630 aaPredicted RBP7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 ZNF358Q9NW07 568 aa7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 MAD2L2Q9UI95 211 aa7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 PRR12Q9ULL5 1215 aa7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 NOD1Q9Y239 953 aa7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 CTDP1Q9Y5B0 961 aaPredicted RBP7.08□□□□□ -1.28
DEPDC4-209ENST00000550587 MYH6P13533 1939 aa7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 PLXNB2O15031 1838 aa7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 VPS37CA5D8V6 355 aaPredicted RBP7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 KLRF2D3W0D1 207 aa7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 BACH1O14867 736 aa7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 SEPT4O43236 478 aa7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 RAD21O60216 631 aa7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 PLEKHA8P1O95397 391 aa7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 BAG4O95429 457 aaKnown RBP7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 F13A1P00488 732 aa7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 RARBP10826 455 aa7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 PDHBP11177 359 aa7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 ERCC3P19447 782 aa7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 COPB2P35606 906 aa7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 ICA1Q05084 483 aa7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 NCOA4Q13772 614 aa7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 KCTD2Q14681 263 aa7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 NFKBIBQ15653 356 aa7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 SHROOM1Q2M3G4 852 aaPredicted RBP7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 ASPRV1Q53RT3 343 aa7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 TBCELQ5QJ74 424 aa7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 GPATCH4Q5T3I0 446 aaKnown RBP7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 GJC2Q5T442 439 aaPredicted RBP7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 ZNF468Q5VIY5 522 aaPredicted RBP7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 RNF180Q86T96 592 aa7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 CMTR1Q8N1G2 835 aaKnown RBP7.07□□□□□ -1.28
DEPDC4-209ENST00000550587 DEPDC4Q8N2C3 294 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms