RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 MBLAC1A4D2B0 266 aaPredicted RBP26.39■■□□□ 1.82
SMARCD1-209ENST00000550477 PLA2G5P39877 138 aa26.39■■□□□ 1.82
SMARCD1-209ENST00000550477 IGBP1P78318 339 aa26.39■■□□□ 1.82
SMARCD1-209ENST00000550477 SGMS1Q86VZ5 419 aa26.39■■□□□ 1.82
SMARCD1-209ENST00000550477 PABPC5Q96DU9 382 aaKnown RBP26.39■■□□□ 1.82
SMARCD1-209ENST00000550477 FTHL17Q9BXU8 183 aa26.39■■□□□ 1.82
SMARCD1-209ENST00000550477 OSBPL7Q9BZF2 842 aa26.39■■□□□ 1.82
SMARCD1-209ENST00000550477 LMAN2LQ9H0V9 348 aa26.39■■□□□ 1.82
SMARCD1-209ENST00000550477 GLT8D2Q9H1C3 349 aa26.39■■□□□ 1.82
SMARCD1-209ENST00000550477 ARIH1Q9Y4X5 557 aaPredicted RBP26.39■■□□□ 1.82
SMARCD1-209ENST00000550477 REV3LO60673 3130 aa26.38■■□□□ 1.81
SMARCD1-209ENST00000550477 hCG_1642624A0A1W2PR95 340 aa26.38■■□□□ 1.81
SMARCD1-209ENST00000550477 ENPP3O14638 875 aa26.38■■□□□ 1.81
SMARCD1-209ENST00000550477 GPR37L1O60883 481 aa26.38■■□□□ 1.81
SMARCD1-209ENST00000550477 BMPR1AP36894 532 aa26.38■■□□□ 1.81
SMARCD1-209ENST00000550477 LPIN1Q14693 890 aa26.38■■□□□ 1.81
SMARCD1-209ENST00000550477 NECTIN1Q15223 517 aa26.38■■□□□ 1.81
SMARCD1-209ENST00000550477 TSHZ1Q6ZSZ6 1077 aa26.38■■□□□ 1.81
SMARCD1-209ENST00000550477 MXRA8Q9BRK3 442 aa26.38■■□□□ 1.81
SMARCD1-209ENST00000550477 TRPC6Q9Y210 931 aa26.38■■□□□ 1.81
SMARCD1-209ENST00000550477 CDY2AQ9Y6F7 541 aa26.38■■□□□ 1.81
SMARCD1-209ENST00000550477 SQORQ9Y6N5 450 aa26.38■■□□□ 1.81
SMARCD1-209ENST00000550477 COL4A6Q14031 1691 aa26.38■■□□□ 1.81
SMARCD1-209ENST00000550477 RALGAPA2Q2PPJ7 1873 aa26.37■■□□□ 1.81
SMARCD1-209ENST00000550477 NLRC5Q86WI3 1866 aa26.37■■□□□ 1.81
SMARCD1-209ENST00000550477 GRXCR2A6NFK2 248 aa26.37■■□□□ 1.81
SMARCD1-209ENST00000550477 C5orf67F2Z3F1 127 aa26.37■■□□□ 1.81
SMARCD1-209ENST00000550477 PI4K2BG5E9Z4 385 aa26.37■■□□□ 1.81
SMARCD1-209ENST00000550477 hCG_1984214I3L0E3 225 aa26.37■■□□□ 1.81
SMARCD1-209ENST00000550477 NAPAP54920 295 aa26.37■■□□□ 1.81
SMARCD1-209ENST00000550477 MRPS6P82932 125 aaKnown RBP26.37■■□□□ 1.81
SMARCD1-209ENST00000550477 MGAT3Q09327 533 aa26.37■■□□□ 1.81
SMARCD1-209ENST00000550477 BTG3Q14201 252 aaPredicted RBP26.37■■□□□ 1.81
SMARCD1-209ENST00000550477 TCEAL5Q5H9L2 206 aa26.37■■□□□ 1.81
SMARCD1-209ENST00000550477 FBXO47Q5MNV8 452 aa26.37■■□□□ 1.81
SMARCD1-209ENST00000550477 RAB11FIP4Q86YS3 637 aa26.37■■□□□ 1.81
SMARCD1-209ENST00000550477 ZNF713Q8N859 430 aaPredicted RBP26.37■■□□□ 1.81
SMARCD1-209ENST00000550477 NEK9Q8TD19 979 aa26.37■■□□□ 1.81
SMARCD1-209ENST00000550477 LRRC2Q9BYS8 371 aa26.37■■□□□ 1.81
SMARCD1-209ENST00000550477 KCNH7Q9NS40 1196 aa26.37■■□□□ 1.81
SMARCD1-209ENST00000550477 ADGRA3Q8IWK6 1321 aa26.37■■□□□ 1.81
SMARCD1-209ENST00000550477 ALADP13716 330 aa26.36■■□□□ 1.81
SMARCD1-209ENST00000550477 INSRRP14616 1297 aa26.36■■□□□ 1.81
SMARCD1-209ENST00000550477 FAM43BQ6ZT52 329 aaPredicted RBP26.36■■□□□ 1.81
SMARCD1-209ENST00000550477 PLPPR4Q7Z2D5 763 aa26.36■■□□□ 1.81
SMARCD1-209ENST00000550477 NFASCO94856 1347 aa26.36■■□□□ 1.81
SMARCD1-209ENST00000550477 STAG3L1P0CL83 205 aa26.35■■□□□ 1.81
SMARCD1-209ENST00000550477 IL9P15248 144 aa26.35■■□□□ 1.81
SMARCD1-209ENST00000550477 STAT5BP51692 787 aa26.35■■□□□ 1.81
SMARCD1-209ENST00000550477 ADCY7P51828 1080 aa26.35■■□□□ 1.81
SMARCD1-209ENST00000550477 MARCH8Q5T0T0 291 aa26.35■■□□□ 1.81
SMARCD1-209ENST00000550477 PPP1R18Q6NYC8 613 aa26.35■■□□□ 1.81
SMARCD1-209ENST00000550477 NME8Q8N427 588 aa26.35■■□□□ 1.81
SMARCD1-209ENST00000550477 PPP2R3CQ969Q6 453 aa26.35■■□□□ 1.81
SMARCD1-209ENST00000550477 NEK1Q96PY6 1258 aa26.35■■□□□ 1.81
SMARCD1-209ENST00000550477 PLVAPQ9BX97 442 aa26.35■■□□□ 1.81
SMARCD1-209ENST00000550477 FAM49AQ9H0Q0 323 aaPredicted RBP26.35■■□□□ 1.81
SMARCD1-209ENST00000550477 RIC8AQ9NPQ8 531 aa26.35■■□□□ 1.81
SMARCD1-209ENST00000550477 CLDND1Q9NY35 253 aa26.35■■□□□ 1.81
SMARCD1-209ENST00000550477 H3BQ06 376 aaPredicted RBP26.34■■□□□ 1.81
SMARCD1-209ENST00000550477 ZNF76P36508 570 aa26.34■■□□□ 1.81
SMARCD1-209ENST00000550477 SLC26A2P50443 739 aa26.34■■□□□ 1.81
SMARCD1-209ENST00000550477 RNF216Q9NWF9 866 aaPredicted RBP26.34■■□□□ 1.81
SMARCD1-209ENST00000550477 PCDHA2Q9Y5H9 948 aa26.34■■□□□ 1.81
SMARCD1-209ENST00000550477 ZBTB43O43298 467 aa26.33■■□□□ 1.81
SMARCD1-209ENST00000550477 RTN1Q16799 776 aa26.33■■□□□ 1.81
SMARCD1-209ENST00000550477 CEP55Q53EZ4 464 aa26.33■■□□□ 1.81
SMARCD1-209ENST00000550477 APOA5Q6Q788 366 aa26.33■■□□□ 1.81
SMARCD1-209ENST00000550477 CLP1Q92989 425 aaKnown RBP26.33■■□□□ 1.81
SMARCD1-209ENST00000550477 PRKAG3Q9UGI9 489 aa26.33■■□□□ 1.81
SMARCD1-209ENST00000550477 TRPV2Q9Y5S1 764 aa26.33■■□□□ 1.81
SMARCD1-209ENST00000550477 TTC3P53804 2025 aa26.32■■□□□ 1.8
SMARCD1-209ENST00000550477 ACTR2P61160 394 aa26.32■■□□□ 1.8
SMARCD1-209ENST00000550477 AP3B2Q13367 1082 aa26.32■■□□□ 1.8
SMARCD1-209ENST00000550477 KRT32Q14532 448 aa26.32■■□□□ 1.8
SMARCD1-209ENST00000550477 NAALADL2Q58DX5 795 aa26.32■■□□□ 1.8
SMARCD1-209ENST00000550477 ODR4Q5SWX8 454 aa26.32■■□□□ 1.8
SMARCD1-209ENST00000550477 WWC2Q6AWC2 1192 aa26.32■■□□□ 1.8
SMARCD1-209ENST00000550477 DHX32Q7L7V1 743 aaKnown RBP26.32■■□□□ 1.8
SMARCD1-209ENST00000550477 V9GY48 417 aaPredicted RBP26.32■■□□□ 1.8
SMARCD1-209ENST00000550477 POTEB3A0JP26 581 aa26.31■■□□□ 1.8
SMARCD1-209ENST00000550477 SMCO2A6NFE2 343 aa26.31■■□□□ 1.8
SMARCD1-209ENST00000550477 DGKIO75912 1065 aa26.31■■□□□ 1.8
SMARCD1-209ENST00000550477 CD52P31358 61 aa26.31■■□□□ 1.8
SMARCD1-209ENST00000550477 FGD1P98174 961 aa26.31■■□□□ 1.8
SMARCD1-209ENST00000550477 PAK2Q13177 524 aa26.31■■□□□ 1.8
SMARCD1-209ENST00000550477 CSPP1Q1MSJ5 1256 aa26.31■■□□□ 1.8
SMARCD1-209ENST00000550477 FAM160B1Q5W0V3 765 aa26.31■■□□□ 1.8
SMARCD1-209ENST00000550477 POTEBQ6S5H4 581 aa26.31■■□□□ 1.8
SMARCD1-209ENST00000550477 ZNF689Q96CS4 500 aaPredicted RBP26.31■■□□□ 1.8
SMARCD1-209ENST00000550477 ANO3Q9BYT9 981 aa26.31■■□□□ 1.8
SMARCD1-209ENST00000550477 CD320Q9NPF0 282 aa26.31■■□□□ 1.8
SMARCD1-209ENST00000550477 LRFN2Q9ULH4 789 aa26.31■■□□□ 1.8
SMARCD1-209ENST00000550477 RBAK-RBAKDNI3L0D1 243 aa26.3■■□□□ 1.8
SMARCD1-209ENST00000550477 HMGB1P09429 215 aaKnown RBP26.3■■□□□ 1.8
SMARCD1-209ENST00000550477 PLCB4Q15147 1175 aa26.3■■□□□ 1.8
SMARCD1-209ENST00000550477 NPAS4Q8IUM7 802 aa26.3■■□□□ 1.8
SMARCD1-209ENST00000550477 CMTR2Q8IYT2 770 aaKnown RBP26.3■■□□□ 1.8
SMARCD1-209ENST00000550477 P2RX5Q93086 422 aa26.3■■□□□ 1.8
SMARCD1-209ENST00000550477 PCYT2Q99447 389 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms