RNA–Protein interactions for RNA: ENST00000550436.4

SVOP-203, Transcript of SV2 related protein, humanhuman

TSL 4

Gene SVOP, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-203ENST00000550436 MRPL42Q9Y6G3 142 aaKnown RBP17.33■□□□□ 0.36
SVOP-203ENST00000550436 NRCAMQ92823 1304 aa17.32■□□□□ 0.36
SVOP-203ENST00000550436 DGKIO75912 1065 aa17.32■□□□□ 0.36
SVOP-203ENST00000550436 CD52P31358 61 aa17.32■□□□□ 0.36
SVOP-203ENST00000550436 IGBP1P78318 339 aa17.32■□□□□ 0.36
SVOP-203ENST00000550436 ADAM15Q13444 863 aa17.32■□□□□ 0.36
SVOP-203ENST00000550436 WTAPQ15007 396 aa17.32■□□□□ 0.36
SVOP-203ENST00000550436 GRIK4Q16099 956 aa17.32■□□□□ 0.36
SVOP-203ENST00000550436 PCNX4Q63HM2 1172 aa17.32■□□□□ 0.36
SVOP-203ENST00000550436 SMARCC2Q8TAQ2 1214 aa17.32■□□□□ 0.36
SVOP-203ENST00000550436 CD207Q9UJ71 328 aa17.32■□□□□ 0.36
SVOP-203ENST00000550436 STXBP3O00186 592 aa17.31■□□□□ 0.36
SVOP-203ENST00000550436 STAM2O75886 525 aa17.31■□□□□ 0.36
SVOP-203ENST00000550436 MMP1P03956 469 aa17.31■□□□□ 0.36
SVOP-203ENST00000550436 ITGB1P05556 798 aa17.31■□□□□ 0.36
SVOP-203ENST00000550436 KCNA2P16389 499 aa17.31■□□□□ 0.36
SVOP-203ENST00000550436 TMEM62Q0P6H9 643 aa17.31■□□□□ 0.36
SVOP-203ENST00000550436 SMAD4Q13485 552 aaKnown RBP17.31■□□□□ 0.36
SVOP-203ENST00000550436 COL9A3Q14050 684 aaPredicted RBP17.31■□□□□ 0.36
SVOP-203ENST00000550436 PAN2Q504Q3 1202 aaKnown RBP17.31■□□□□ 0.36
SVOP-203ENST00000550436 HERC4Q5GLZ8 1057 aaPredicted RBP17.31■□□□□ 0.36
SVOP-203ENST00000550436 CMTR1Q8N1G2 835 aaKnown RBP17.31■□□□□ 0.36
SVOP-203ENST00000550436 SPPL3Q8TCT6 385 aa17.31■□□□□ 0.36
SVOP-203ENST00000550436 SENP7Q9BQF6 1050 aa17.31■□□□□ 0.36
SVOP-203ENST00000550436 ESYT1Q9BSJ8 1104 aa17.31■□□□□ 0.36
SVOP-203ENST00000550436 FAM49AQ9H0Q0 323 aaPredicted RBP17.31■□□□□ 0.36
SVOP-203ENST00000550436 CLEC1BQ9P126 229 aa17.31■□□□□ 0.36
SVOP-203ENST00000550436 U3KPZ7 1027 aaPredicted RBP17.31■□□□□ 0.36
SVOP-203ENST00000550436 PLXNA4Q9HCM2 1894 aa17.31■□□□□ 0.36
SVOP-203ENST00000550436 E7EWF7 191 aa17.3■□□□□ 0.36
SVOP-203ENST00000550436 NCK2O43639 380 aa17.3■□□□□ 0.36
SVOP-203ENST00000550436 ITGB5P18084 799 aa17.3■□□□□ 0.36
SVOP-203ENST00000550436 IBSPP21815 317 aaPredicted RBP17.3■□□□□ 0.36
SVOP-203ENST00000550436 RBM10P98175 930 aaKnown RBP17.3■□□□□ 0.36
SVOP-203ENST00000550436 TRDNQ13061 729 aa17.3■□□□□ 0.36
SVOP-203ENST00000550436 TRAF1Q13077 416 aa17.3■□□□□ 0.36
SVOP-203ENST00000550436 IER5LQ5T953 404 aa17.3■□□□□ 0.36
SVOP-203ENST00000550436 TAF2Q6P1X5 1199 aa17.3■□□□□ 0.36
SVOP-203ENST00000550436 CRIPAKQ8N1N5 446 aa17.3■□□□□ 0.36
SVOP-203ENST00000550436 PRSS33Q8NF86 280 aa17.3■□□□□ 0.36
SVOP-203ENST00000550436 IGDCC4Q8TDY8 1250 aa17.3■□□□□ 0.36
SVOP-203ENST00000550436 TRAPPC12Q8WVT3 735 aa17.3■□□□□ 0.36
SVOP-203ENST00000550436 MSLNLQ96KJ4 702 aa17.3■□□□□ 0.36
SVOP-203ENST00000550436 PCYT2Q99447 389 aa17.3■□□□□ 0.36
SVOP-203ENST00000550436 UPF3BQ9BZI7 483 aaKnown RBP17.3■□□□□ 0.36
SVOP-203ENST00000550436 TUBE1Q9UJT0 475 aa17.3■□□□□ 0.36
SVOP-203ENST00000550436 hCG_1642624A0A1W2PR95 340 aa17.29■□□□□ 0.36
SVOP-203ENST00000550436 MBLAC1A4D2B0 266 aaPredicted RBP17.29■□□□□ 0.36
SVOP-203ENST00000550436 PLEKHA8P1O95397 391 aa17.29■□□□□ 0.36
SVOP-203ENST00000550436 NDUFV1P49821 464 aa17.29■□□□□ 0.36
SVOP-203ENST00000550436 MRPS6P82932 125 aaKnown RBP17.29■□□□□ 0.36
SVOP-203ENST00000550436 UBE2SQ16763 222 aa17.29■□□□□ 0.36
SVOP-203ENST00000550436 RBM23Q86U06 439 aaKnown RBP17.29■□□□□ 0.36
SVOP-203ENST00000550436 NLRX1Q86UT6 975 aa17.29■□□□□ 0.36
SVOP-203ENST00000550436 KLHL23Q8NBE8 558 aa17.29■□□□□ 0.36
SVOP-203ENST00000550436 SEPT1Q8WYJ6 367 aa17.29■□□□□ 0.36
SVOP-203ENST00000550436 GLG1Q92896 1179 aa17.29■□□□□ 0.36
SVOP-203ENST00000550436 MAP4K1Q92918 833 aa17.29■□□□□ 0.36
SVOP-203ENST00000550436 LSG1Q9H089 658 aaKnown RBP17.29■□□□□ 0.36
SVOP-203ENST00000550436 PPP4R2Q9NY27 417 aa17.29■□□□□ 0.36
SVOP-203ENST00000550436 RBM8AQ9Y5S9 174 aaKnown RBP17.29■□□□□ 0.36
SVOP-203ENST00000550436 ERICH2A1L162 156 aa17.28■□□□□ 0.36
SVOP-203ENST00000550436 GLP2RO95838 553 aa17.28■□□□□ 0.36
SVOP-203ENST00000550436 INSRRP14616 1297 aa17.28■□□□□ 0.36
SVOP-203ENST00000550436 RXRAP19793 462 aa17.28■□□□□ 0.36
SVOP-203ENST00000550436 TSHZ1Q6ZSZ6 1077 aa17.28■□□□□ 0.36
SVOP-203ENST00000550436 CATIPQ7Z7H3 387 aa17.28■□□□□ 0.36
SVOP-203ENST00000550436 RAB11FIP4Q86YS3 637 aa17.28■□□□□ 0.36
SVOP-203ENST00000550436 EDAQ92838 391 aa17.28■□□□□ 0.36
SVOP-203ENST00000550436 CUL5Q93034 780 aa17.28■□□□□ 0.36
SVOP-203ENST00000550436 BARX2Q9UMQ3 279 aaPredicted RBP17.28■□□□□ 0.36
SVOP-203ENST00000550436 RWDD3Q9Y3V2 267 aa17.28■□□□□ 0.36
SVOP-203ENST00000550436 CACNA1HO95180 2353 aa17.27■□□□□ 0.36
SVOP-203ENST00000550436 PIK3CDO00329 1044 aa17.27■□□□□ 0.36
SVOP-203ENST00000550436 PPFIA3O75145 1194 aa17.27■□□□□ 0.36
SVOP-203ENST00000550436 NRIP1P48552 1158 aa17.27■□□□□ 0.36
SVOP-203ENST00000550436 RALYLQ86SE5 291 aaKnown RBP17.27■□□□□ 0.36
SVOP-203ENST00000550436 RSPH3Q86UC2 560 aa17.27■□□□□ 0.36
SVOP-203ENST00000550436 MB21D2Q8IYB1 491 aaPredicted RBP17.27■□□□□ 0.36
SVOP-203ENST00000550436 SRBD1Q8N5C6 995 aaKnown RBP17.27■□□□□ 0.36
SVOP-203ENST00000550436 NCOA7Q8NI08 942 aa17.27■□□□□ 0.36
SVOP-203ENST00000550436 POF1BQ8WVV4 589 aa17.27■□□□□ 0.36
SVOP-203ENST00000550436 GPRASP2Q96D09 838 aa17.27■□□□□ 0.36
SVOP-203ENST00000550436 RRP36Q96EU6 259 aaKnown RBP17.27■□□□□ 0.36
SVOP-203ENST00000550436 MFSD14AQ96MC6 490 aa17.27■□□□□ 0.36
SVOP-203ENST00000550436 PLVAPQ9BX97 442 aa17.27■□□□□ 0.36
SVOP-203ENST00000550436 TMX1Q9H3N1 280 aa17.27■□□□□ 0.36
SVOP-203ENST00000550436 ANO2Q9NQ90 1003 aa17.27■□□□□ 0.36
SVOP-203ENST00000550436 ERAP1Q9NZ08 941 aa17.27■□□□□ 0.36
SVOP-203ENST00000550436 HCSTQ9UBK5 93 aa17.27■□□□□ 0.36
SVOP-203ENST00000550436 PADI3Q9ULW8 664 aa17.27■□□□□ 0.36
SVOP-203ENST00000550436 UBIAD1Q9Y5Z9 338 aa17.27■□□□□ 0.36
SVOP-203ENST00000550436 EVPLQ92817 2033 aa17.26■□□□□ 0.35
SVOP-203ENST00000550436 CDC45O75419 566 aa17.26■□□□□ 0.35
SVOP-203ENST00000550436 EYA4O95677 639 aa17.26■□□□□ 0.35
SVOP-203ENST00000550436 TMEM266Q2M3C6 531 aa17.26■□□□□ 0.35
SVOP-203ENST00000550436 ERICH6BQ5W0A0 696 aa17.26■□□□□ 0.35
SVOP-203ENST00000550436 XRRA1Q6P2D8 792 aa17.26■□□□□ 0.35
SVOP-203ENST00000550436 TRIM67Q6ZTA4 783 aa17.26■□□□□ 0.35
SVOP-203ENST00000550436 CMTR2Q8IYT2 770 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms