RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 HDAC6Q9UBN7 1215 aa8.83□□□□□ -1
NEK3-201ENST00000550331 PNMA6FA0A0J9YX94 578 aa8.82□□□□□ -1
NEK3-201ENST00000550331 PRR33A8MZF0 331 aa8.82□□□□□ -1
NEK3-201ENST00000550331 H3BM21 787 aa8.82□□□□□ -1
NEK3-201ENST00000550331 GCOM1H8Y6P7 765 aaPredicted RBP8.82□□□□□ -1
NEK3-201ENST00000550331 IFIT3O14879 490 aaKnown RBP8.82□□□□□ -1
NEK3-201ENST00000550331 NBNO60934 754 aa8.82□□□□□ -1
NEK3-201ENST00000550331 STAM2O75886 525 aa8.82□□□□□ -1
NEK3-201ENST00000550331 ARHGEF15O94989 841 aa8.82□□□□□ -1
NEK3-201ENST00000550331 GGPS1O95749 300 aa8.82□□□□□ -1
NEK3-201ENST00000550331 CYP21A2P08686 494 aa8.82□□□□□ -1
NEK3-201ENST00000550331 POLR2MP0CAP2 368 aa8.82□□□□□ -1
NEK3-201ENST00000550331 MYCLP12524 364 aaPredicted RBP8.82□□□□□ -1
NEK3-201ENST00000550331 UBA1P22314 1058 aaKnown RBP8.82□□□□□ -1
NEK3-201ENST00000550331 HOXA13P31271 388 aaPredicted RBP8.82□□□□□ -1
NEK3-201ENST00000550331 TROAPQ12815 778 aa8.82□□□□□ -1
NEK3-201ENST00000550331 SLC35G1Q2M3R5 365 aa8.82□□□□□ -1
NEK3-201ENST00000550331 TRIM71Q2Q1W2 868 aaKnown RBP8.82□□□□□ -1
NEK3-201ENST00000550331 HSDL1Q3SXM5 330 aa8.82□□□□□ -1
NEK3-201ENST00000550331 GNPTABQ3T906 1256 aa8.82□□□□□ -1
NEK3-201ENST00000550331 RALYLQ86SE5 291 aaKnown RBP8.82□□□□□ -1
NEK3-201ENST00000550331 NCOA7Q8NI08 942 aa8.82□□□□□ -1
NEK3-201ENST00000550331 IL31RAQ8NI17 732 aa8.82□□□□□ -1
NEK3-201ENST00000550331 SNIP1Q8TAD8 396 aaKnown RBP8.82□□□□□ -1
NEK3-201ENST00000550331 YTHDC1Q96MU7 727 aaKnown RBP8.82□□□□□ -1
NEK3-201ENST00000550331 SPATA33Q96N06 139 aa8.82□□□□□ -1
NEK3-201ENST00000550331 PIGSQ96S52 555 aa8.82□□□□□ -1
NEK3-201ENST00000550331 ALG1Q9BT22 464 aa8.82□□□□□ -1
NEK3-201ENST00000550331 FRMPD4Q14CM0 1322 aa8.81□□□□□ -1
NEK3-201ENST00000550331 EMSYQ7Z589 1322 aa8.81□□□□□ -1
NEK3-201ENST00000550331 CYTH3O43739 400 aa8.81□□□□□ -1
NEK3-201ENST00000550331 CAND2O75155 1236 aa8.81□□□□□ -1
NEK3-201ENST00000550331 LGR5O75473 907 aa8.81□□□□□ -1
NEK3-201ENST00000550331 GJB5O95377 273 aa8.81□□□□□ -1
NEK3-201ENST00000550331 CFHP08603 1231 aa8.81□□□□□ -1
NEK3-201ENST00000550331 CHMLP26374 656 aa8.81□□□□□ -1
NEK3-201ENST00000550331 HOXC8P31273 242 aa8.81□□□□□ -1
NEK3-201ENST00000550331 SSTR3P32745 418 aaPredicted RBP8.81□□□□□ -1
NEK3-201ENST00000550331 DEFB103AP81534 67 aa8.81□□□□□ -1
NEK3-201ENST00000550331 IKBKEQ14164 716 aa8.81□□□□□ -1
NEK3-201ENST00000550331 WTAPQ15007 396 aa8.81□□□□□ -1
NEK3-201ENST00000550331 CSPP1Q1MSJ5 1256 aa8.81□□□□□ -1
NEK3-201ENST00000550331 ZNF618Q5T7W0 954 aa8.81□□□□□ -1
NEK3-201ENST00000550331 SPRED2Q7Z698 418 aa8.81□□□□□ -1
NEK3-201ENST00000550331 CATIPQ7Z7H3 387 aa8.81□□□□□ -1
NEK3-201ENST00000550331 SERINC5Q86VE9 423 aa8.81□□□□□ -1
NEK3-201ENST00000550331 FCHSD1Q86WN1 690 aa8.81□□□□□ -1
NEK3-201ENST00000550331 GJD3Q8N144 294 aa8.81□□□□□ -1
NEK3-201ENST00000550331 SNX27Q96L92 541 aa8.81□□□□□ -1
NEK3-201ENST00000550331 INPP4AQ96PE3 977 aaPredicted RBP8.81□□□□□ -1
NEK3-201ENST00000550331 MAP3K14Q99558 947 aa8.81□□□□□ -1
NEK3-201ENST00000550331 RAD9AQ99638 391 aa8.81□□□□□ -1
NEK3-201ENST00000550331 C16orf70Q9BSU1 422 aa8.81□□□□□ -1
NEK3-201ENST00000550331 MLXIPQ9HAP2 919 aa8.81□□□□□ -1
NEK3-201ENST00000550331 LMCD1Q9NZU5 365 aa8.81□□□□□ -1
NEK3-201ENST00000550331 SIP14410 1827 aa8.81□□□□□ -1
NEK3-201ENST00000550331 LCHNA4D1U4 455 aa8.8□□□□□ -1
NEK3-201ENST00000550331 E7EWF7 191 aa8.8□□□□□ -1
NEK3-201ENST00000550331 H3BRB1 525 aa8.8□□□□□ -1
NEK3-201ENST00000550331 SGSM2O43147 1006 aa8.8□□□□□ -1
NEK3-201ENST00000550331 LPXNO60711 386 aa8.8□□□□□ -1
NEK3-201ENST00000550331 SMARCA1P28370 1054 aa8.8□□□□□ -1
NEK3-201ENST00000550331 ICAM3P32942 547 aa8.8□□□□□ -1
NEK3-201ENST00000550331 ERVK-21P61565 698 aa8.8□□□□□ -1
NEK3-201ENST00000550331 SP2Q02086 613 aa8.8□□□□□ -1
NEK3-201ENST00000550331 NHLH1Q02575 133 aa8.8□□□□□ -1
NEK3-201ENST00000550331 PTH1RQ03431 593 aa8.8□□□□□ -1
NEK3-201ENST00000550331 NEDD9Q14511 834 aa8.8□□□□□ -1
NEK3-201ENST00000550331 HIC1Q14526 733 aa8.8□□□□□ -1
NEK3-201ENST00000550331 METTL7BQ6UX53 244 aa8.8□□□□□ -1
NEK3-201ENST00000550331 FAM178BQ8IXR5 827 aa8.8□□□□□ -1
NEK3-201ENST00000550331 TMEM151AQ8N4L1 468 aa8.8□□□□□ -1
NEK3-201ENST00000550331 GDPD5Q8WTR4 605 aa8.8□□□□□ -1
NEK3-201ENST00000550331 WNT8BQ93098 351 aa8.8□□□□□ -1
NEK3-201ENST00000550331 MTA3Q9BTC8 594 aa8.8□□□□□ -1
NEK3-201ENST00000550331 USP26Q9BXU7 913 aa8.8□□□□□ -1
NEK3-201ENST00000550331 TUT1Q9H6E5 874 aaKnown RBP8.8□□□□□ -1
NEK3-201ENST00000550331 UBE2ZQ9H832 354 aaPredicted RBP8.8□□□□□ -1
NEK3-201ENST00000550331 ZNF318Q5VUA4 2279 aa8.8□□□□□ -1
NEK3-201ENST00000550331 WDFY4Q6ZS81 3184 aa8.8□□□□□ -1
NEK3-201ENST00000550331 C17orf102A2RUQ5 167 aa8.79□□□□□ -1
NEK3-201ENST00000550331 RSPH10B2B2RC85 870 aa8.79□□□□□ -1
NEK3-201ENST00000550331 SPATA31C2B4DYI2 1134 aa8.79□□□□□ -1
NEK3-201ENST00000550331 PIK3CDO00329 1044 aa8.79□□□□□ -1
NEK3-201ENST00000550331 NOP56O00567 594 aaKnown RBP8.79□□□□□ -1
NEK3-201ENST00000550331 FIBPO43427 364 aa8.79□□□□□ -1
NEK3-201ENST00000550331 DDAH1O94760 285 aa8.79□□□□□ -1
NEK3-201ENST00000550331 LGALS2P05162 132 aa8.79□□□□□ -1
NEK3-201ENST00000550331 RSPH10BP0C881 870 aa8.79□□□□□ -1
NEK3-201ENST00000550331 SMIM10L2AP0DMW4 78 aa8.79□□□□□ -1
NEK3-201ENST00000550331 SMIM10L2BP0DMW5 78 aa8.79□□□□□ -1
NEK3-201ENST00000550331 ALADP13716 330 aa8.79□□□□□ -1
NEK3-201ENST00000550331 KIF5BP33176 963 aa8.79□□□□□ -1
NEK3-201ENST00000550331 THPOP40225 353 aa8.79□□□□□ -1
NEK3-201ENST00000550331 ANTXR2P58335 489 aa8.79□□□□□ -1
NEK3-201ENST00000550331 MRPS9P82933 396 aaKnown RBP8.79□□□□□ -1
NEK3-201ENST00000550331 ZNF200P98182 395 aaPredicted RBP8.79□□□□□ -1
NEK3-201ENST00000550331 MBTPS1Q14703 1052 aa8.79□□□□□ -1
NEK3-201ENST00000550331 TCTN1Q2MV58 587 aa8.79□□□□□ -1
NEK3-201ENST00000550331 XP32Q5T750 250 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms