RNA–Protein interactions for RNA: ENST00000550188.1

ARFGAP1-223, Transcript of ADP ribosylation factor GTPase activating protein 1, human

TSL 5

Gene ARFGAP1, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARFGAP1-223	ENST00000550188	OXER1	Q8TDS5	423 aa		13.53	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	SNX21	Q969T3	373 aa		13.53	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	UIMC1	Q96RL1	719 aa		13.53	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	IGKV6D-21	A0A0A0MT36	114 aa		13.52	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	BACH1	O14867	736 aa		13.52	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	MSH4	O15457	936 aa		13.52	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	CAND2	O75155	1236 aa		13.52	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	TDP2	O95551	362 aa		13.52	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	MMP1	P03956	469 aa		13.52	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	GCFC2	P16383	781 aa	Known RBP	13.52	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	ANP32A	P39687	249 aa	Known RBP	13.52	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	ADAM17	P78536	824 aa		13.52	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	HMGN5	P82970	282 aa	Known RBP	13.52	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	LETM2	Q2VYF4	491 aa		13.52	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	PIK3AP1	Q6ZUJ8	805 aa		13.52	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	OTOP2	Q7RTS6	562 aa		13.52	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	NEK8	Q86SG6	692 aa		13.52	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	HSCB	Q8IWL3	235 aa		13.52	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	WNT8B	Q93098	351 aa		13.52	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	VWCE	Q96DN2	955 aa		13.52	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	MBOAT7	Q96N66	472 aa		13.52	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	RIT2	Q99578	217 aa		13.52	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	NAP1L4	Q99733	375 aa	Known RBP	13.52	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	DDX25	Q9UHL0	483 aa	Known RBP	13.52	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	TRPC6	Q9Y210	931 aa		13.52	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	13.51	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	13.51	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	RRN3P2	A6NIE6	340 aa		13.51	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	WDR64	B1ANS9	1081 aa		13.51	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	GAS7	O60861	476 aa		13.51	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	PSAP	P07602	524 aa		13.51	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	ACTN1	P12814	892 aa		13.51	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	THPO	P40225	353 aa		13.51	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	PLCB4	Q15147	1175 aa		13.51	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	GRIK4	Q16099	956 aa		13.51	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	ZNF618	Q5T7W0	954 aa		13.51	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	LRCH2	Q5VUJ6	765 aa		13.51	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	KRT40	Q6A162	431 aa		13.51	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	TAF2	Q6P1X5	1199 aa		13.51	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	PDXDC2P	Q6P474	469 aa		13.51	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	CCDC60	Q8IWA6	550 aa	Predicted RBP	13.51	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	SLC5A5	Q92911	643 aa		13.51	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	TEKT3	Q9BXF9	490 aa		13.51	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.51	□□□□□ -0.25	6e-6	■□□□□ 8.1
ARFGAP1-223	ENST00000550188	ZNF302	Q9NR11	478 aa		13.51	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	TUBE1	Q9UJT0	475 aa		13.51	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	PCDHA10	Q9Y5I2	948 aa		13.51	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	POTEB3	A0JP26	581 aa		13.5	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	MBLAC1	A4D2B0	266 aa	Predicted RBP	13.5	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	ZBBX	A8MT70	800 aa		13.5	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	RSPH10B2	B2RC85	870 aa		13.5	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	CXCL10	P02778	98 aa		13.5	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	RSPH10B	P0C881	870 aa		13.5	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	INSRR	P14616	1297 aa		13.5	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	JAK3	P52333	1124 aa		13.5	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	FOSB	P53539	338 aa		13.5	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	NR5A1	Q13285	461 aa		13.5	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	PPP4R3A	Q6IN85	833 aa		13.5	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	SWSAP1	Q6NVH7	229 aa		13.5	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	TRAF7	Q6Q0C0	670 aa		13.5	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	POTEB	Q6S5H4	581 aa		13.5	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	DIS3L2	Q8IYB7	885 aa	Known RBP	13.5	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	ETNPPL	Q8TBG4	499 aa		13.5	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	TNFRSF25	Q93038	417 aa		13.5	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	DAXX	Q9UER7	740 aa	Predicted RBP	13.5	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	SAMM50	Q9Y512	469 aa		13.5	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	CHMP2A	O43633	222 aa		13.49	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	SLC37A4	O43826	429 aa		13.49	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	CCNT1	O60563	726 aa	Known RBP	13.49	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	NBN	O60934	754 aa		13.49	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	PSMD10	O75832	226 aa		13.49	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	BAIAP3	O94812	1187 aa		13.49	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	RPLP2	P05387	115 aa	Known RBP	13.49	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	SFN	P31947	248 aa		13.49	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	IGBP1	P78318	339 aa		13.49	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	SAFB	Q15424	915 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	MARCH8	Q5T0T0	291 aa		13.49	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	FAM109B	Q6ICB4	259 aa	Predicted RBP	13.49	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	RPAIN	Q86UA6	219 aa		13.49	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	RSPH3	Q86UC2	560 aa		13.49	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	CKAP2L	Q8IYA6	745 aa		13.49	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	FAM184A	Q8NB25	1140 aa		13.49	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	RDM1	Q8NG50	284 aa		13.49	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	ATP8B4	Q8TF62	1192 aa		13.49	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	C8orf76	Q96K31	380 aa		13.49	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	UNC45A	Q9H3U1	944 aa		13.49	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	DISC1	Q9NRI5	854 aa		13.49	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	CXXC1	Q9P0U4	656 aa	Predicted RBP	13.49	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	KIF3A	Q9Y496	699 aa		13.49	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	MAFB	Q9Y5Q3	323 aa	Predicted RBP	13.49	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	SLC4A7	Q9Y6M7	1214 aa		13.49	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	LAMA3	Q16787	3333 aa		13.49	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	COL1A2	P08123	1366 aa		13.48	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	IGSF9B	Q9UPX0	1349 aa		13.48	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	BTBD18	B2RXH4	712 aa		13.48	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	HBP1	O60381	514 aa		13.48	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	CTSH	P09668	335 aa		13.48	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	MBTPS1	Q14703	1052 aa		13.48	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	GPNMB	Q14956	572 aa		13.48	□□□□□ -0.25
ARFGAP1-223	ENST00000550188	EARS2	Q5JPH6	523 aa	Known RBP	13.48	□□□□□ -0.25

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