RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 MKRN4PQ13434 485 aaPredicted RBP13.42□□□□□ -0.26
LETMD1-221ENST00000550100 PLCB4Q15147 1175 aa13.42□□□□□ -0.26
LETMD1-221ENST00000550100 GRIK4Q16099 956 aa13.42□□□□□ -0.26
LETMD1-221ENST00000550100 SPRED2Q7Z698 418 aa13.42□□□□□ -0.26
LETMD1-221ENST00000550100 CCDC60Q8IWA6 550 aaPredicted RBP13.42□□□□□ -0.26
LETMD1-221ENST00000550100 BLIDQ8IZY5 108 aa13.42□□□□□ -0.26
LETMD1-221ENST00000550100 DAGLBQ8NCG7 672 aa13.42□□□□□ -0.26
LETMD1-221ENST00000550100 CCDC148Q8NFR7 591 aa13.42□□□□□ -0.26
LETMD1-221ENST00000550100 TBCKQ8TEA7 893 aa13.42□□□□□ -0.26
LETMD1-221ENST00000550100 MYLIPQ8WY64 445 aa13.42□□□□□ -0.26
LETMD1-221ENST00000550100 GLG1Q92896 1179 aa13.42□□□□□ -0.26
LETMD1-221ENST00000550100 SDF4Q9BRK5 362 aa13.42□□□□□ -0.26
LETMD1-221ENST00000550100 PHF20Q9BVI0 1012 aa13.42□□□□□ -0.26
LETMD1-221ENST00000550100 NKX2-4Q9H2Z4 354 aa13.42□□□□□ -0.26
LETMD1-221ENST00000550100 SMARCAD1Q9H4L7 1026 aa13.42□□□□□ -0.26
LETMD1-221ENST00000550100 SLC4A7Q9Y6M7 1214 aa13.42□□□□□ -0.26
LETMD1-221ENST00000550100 MBLAC1A4D2B0 266 aaPredicted RBP13.42□□□□□ -0.26
LETMD1-221ENST00000550100 FAM205CA6NFA0 338 aa13.42□□□□□ -0.26
LETMD1-221ENST00000550100 MSH4O15457 936 aa13.42□□□□□ -0.26
LETMD1-221ENST00000550100 TDP2O95551 362 aa13.42□□□□□ -0.26
LETMD1-221ENST00000550100 PFKMP08237 780 aa13.42□□□□□ -0.26
LETMD1-221ENST00000550100 CTSHP09668 335 aa13.42□□□□□ -0.26
LETMD1-221ENST00000550100 ATP2A2P16615 1042 aaKnown RBP13.42□□□□□ -0.26
LETMD1-221ENST00000550100 PPFIA1Q13136 1202 aa13.42□□□□□ -0.26
LETMD1-221ENST00000550100 CCDC155Q8N6L0 562 aa13.42□□□□□ -0.26
LETMD1-221ENST00000550100 BICD2Q8TD16 824 aa13.42□□□□□ -0.26
LETMD1-221ENST00000550100 GTF3C6Q969F1 213 aa13.42□□□□□ -0.26
LETMD1-221ENST00000550100 ZNF577Q9BSK1 485 aa13.42□□□□□ -0.26
LETMD1-221ENST00000550100 ZNF576Q9H609 170 aa13.42□□□□□ -0.26
LETMD1-221ENST00000550100 ERAP1Q9NZ08 941 aa13.42□□□□□ -0.26
LETMD1-221ENST00000550100 ZNF215Q9UL58 517 aaPredicted RBP13.42□□□□□ -0.26
LETMD1-221ENST00000550100 STXBP5LQ9Y2K9 1186 aa13.42□□□□□ -0.26
LETMD1-221ENST00000550100 NRCAMQ92823 1304 aa13.41□□□□□ -0.26
LETMD1-221ENST00000550100 STK36Q9NRP7 1315 aa13.41□□□□□ -0.26
LETMD1-221ENST00000550100 RSPH10B2B2RC85 870 aa13.41□□□□□ -0.26
LETMD1-221ENST00000550100 ZBTB42B2RXF5 422 aa13.41□□□□□ -0.26
LETMD1-221ENST00000550100 RSPH10BP0C881 870 aa13.41□□□□□ -0.26
LETMD1-221ENST00000550100 STAT5BP51692 787 aa13.41□□□□□ -0.26
LETMD1-221ENST00000550100 USP11P51784 963 aa13.41□□□□□ -0.26
LETMD1-221ENST00000550100 WDR5P61964 334 aaKnown RBP13.41□□□□□ -0.26
LETMD1-221ENST00000550100 IGBP1P78318 339 aa13.41□□□□□ -0.26
LETMD1-221ENST00000550100 FAM26DQ5JW98 314 aa13.41□□□□□ -0.26
LETMD1-221ENST00000550100 SWSAP1Q6NVH7 229 aa13.41□□□□□ -0.26
LETMD1-221ENST00000550100 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.41□□□□□ -0.265e-8■■■□□ 15.1
LETMD1-221ENST00000550100 PLPPR4Q7Z2D5 763 aa13.41□□□□□ -0.26
LETMD1-221ENST00000550100 NSUN7Q8NE18 718 aaKnown RBP13.41□□□□□ -0.26
LETMD1-221ENST00000550100 DBF4BQ8NFT6 615 aa13.41□□□□□ -0.26
LETMD1-221ENST00000550100 ORC3Q9UBD5 711 aaPredicted RBP13.41□□□□□ -0.26
LETMD1-221ENST00000550100 WDR81Q562E7 1941 aa13.4□□□□□ -0.26
LETMD1-221ENST00000550100 TRANK1O15050 2925 aa13.4□□□□□ -0.26
LETMD1-221ENST00000550100 SIP14410 1827 aa13.4□□□□□ -0.26
LETMD1-221ENST00000550100 CYP3A7-CYP3A51PA0A087WV96 503 aa13.4□□□□□ -0.26
LETMD1-221ENST00000550100 CYP3A7P24462 503 aa13.4□□□□□ -0.26
LETMD1-221ENST00000550100 MGAT3Q09327 533 aa13.4□□□□□ -0.26
LETMD1-221ENST00000550100 ANKRD1Q15327 319 aa13.4□□□□□ -0.26
LETMD1-221ENST00000550100 MCTP2Q6DN12 878 aa13.4□□□□□ -0.26
LETMD1-221ENST00000550100 CNKSR3Q6P9H4 555 aa13.4□□□□□ -0.26
LETMD1-221ENST00000550100 DNAJB3Q8WWF6 145 aa13.4□□□□□ -0.26
LETMD1-221ENST00000550100 TNFRSF25Q93038 417 aa13.4□□□□□ -0.26
LETMD1-221ENST00000550100 MBOAT7Q96N66 472 aa13.4□□□□□ -0.26
LETMD1-221ENST00000550100 LCHNA4D1U4 455 aa13.39□□□□□ -0.27
LETMD1-221ENST00000550100 SLC37A4O43826 429 aa13.39□□□□□ -0.27
LETMD1-221ENST00000550100 FOSBP53539 338 aa13.39□□□□□ -0.27
LETMD1-221ENST00000550100 ADGRE1Q14246 886 aa13.39□□□□□ -0.27
LETMD1-221ENST00000550100 INF2Q27J81 1249 aa13.39□□□□□ -0.27
LETMD1-221ENST00000550100 PLEKHG4Q58EX7 1191 aa13.39□□□□□ -0.27
LETMD1-221ENST00000550100 CPLX2Q6PUV4 134 aaKnown RBP13.39□□□□□ -0.27
LETMD1-221ENST00000550100 HERC6Q8IVU3 1022 aa13.39□□□□□ -0.27
LETMD1-221ENST00000550100 SLC5A5Q92911 643 aa13.39□□□□□ -0.27
LETMD1-221ENST00000550100 TUBE1Q9UJT0 475 aa13.39□□□□□ -0.27
LETMD1-221ENST00000550100 SPTBN5Q9NRC6 3674 aaKnown RBP13.39□□□□□ -0.27
LETMD1-221ENST00000550100 VCANP13611 3396 aa13.39□□□□□ -0.27
LETMD1-221ENST00000550100 EVPLQ92817 2033 aa13.38□□□□□ -0.27
LETMD1-221ENST00000550100 POTEB3A0JP26 581 aa13.38□□□□□ -0.27
LETMD1-221ENST00000550100 EPOPA6NHQ4 379 aa13.38□□□□□ -0.27
LETMD1-221ENST00000550100 RFXAPO00287 272 aa13.38□□□□□ -0.27
LETMD1-221ENST00000550100 WNT7AO00755 349 aa13.38□□□□□ -0.27
LETMD1-221ENST00000550100 ZNF862O60290 1169 aa13.38□□□□□ -0.27
LETMD1-221ENST00000550100 PSMD10O75832 226 aa13.38□□□□□ -0.27
LETMD1-221ENST00000550100 GNAT1P11488 350 aa13.38□□□□□ -0.27
LETMD1-221ENST00000550100 ACTN1P12814 892 aa13.38□□□□□ -0.27
LETMD1-221ENST00000550100 NR5A1Q13285 461 aa13.38□□□□□ -0.27
LETMD1-221ENST00000550100 UGCGQ16739 394 aa13.38□□□□□ -0.27
LETMD1-221ENST00000550100 Q4G0T1 1027 aa13.38□□□□□ -0.27
LETMD1-221ENST00000550100 POTEBQ6S5H4 581 aa13.38□□□□□ -0.27
LETMD1-221ENST00000550100 B3GNT9Q6UX72 402 aa13.38□□□□□ -0.27
LETMD1-221ENST00000550100 TRMT1LQ7Z2T5 733 aaKnown RBP13.38□□□□□ -0.27
LETMD1-221ENST00000550100 RPAINQ86UA6 219 aa13.38□□□□□ -0.27
LETMD1-221ENST00000550100 ETNPPLQ8TBG4 499 aa13.38□□□□□ -0.27
LETMD1-221ENST00000550100 MTIF3Q9H2K0 278 aaKnown RBP13.38□□□□□ -0.27
LETMD1-221ENST00000550100 UNC45AQ9H3U1 944 aa13.38□□□□□ -0.27
LETMD1-221ENST00000550100 PRDM12Q9H4Q4 367 aa13.38□□□□□ -0.27
LETMD1-221ENST00000550100 AZI2Q9H6S1 392 aa13.38□□□□□ -0.27
LETMD1-221ENST00000550100 TBC1D22BQ9NU19 505 aa13.38□□□□□ -0.27
LETMD1-221ENST00000550100 TRPC6Q9Y210 931 aa13.38□□□□□ -0.27
LETMD1-221ENST00000550100 PCDHA11Q9Y5I1 949 aa13.38□□□□□ -0.27
LETMD1-221ENST00000550100 MAFBQ9Y5Q3 323 aaPredicted RBP13.38□□□□□ -0.27
LETMD1-221ENST00000550100 MYH9P35579 1960 aaKnown RBP13.38□□□□□ -0.27
LETMD1-221ENST00000550100 TMEM265A0A087WTH1 108 aa13.37□□□□□ -0.27
LETMD1-221ENST00000550100 BACH1O14867 736 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms