RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 PCDHA2Q9Y5H9 948 aa11.29□□□□□ -0.6
ERBB3-214ENST00000550070 MYH4Q9Y623 1939 aa11.29□□□□□ -0.6
ERBB3-214ENST00000550070 CNTNAP4Q9C0A0 1308 aa11.29□□□□□ -0.6
ERBB3-214ENST00000550070 GPR75-ASB3A0A0A6YYF3 556 aa11.29□□□□□ -0.6
ERBB3-214ENST00000550070 NPHP3-ACAD11A0A0J9YXS1 232 aa11.29□□□□□ -0.6
ERBB3-214ENST00000550070 E9PMD0 336 aa11.29□□□□□ -0.6
ERBB3-214ENST00000550070 hCG_1984214I3L0E3 225 aa11.29□□□□□ -0.6
ERBB3-214ENST00000550070 NDUFAB1O14561 156 aa11.29□□□□□ -0.6
ERBB3-214ENST00000550070 RAD51CO43502 376 aa11.29□□□□□ -0.6
ERBB3-214ENST00000550070 ZEB2O60315 1214 aa11.29□□□□□ -0.6
ERBB3-214ENST00000550070 SSBP05455 408 aaKnown RBP eCLIP11.29□□□□□ -0.6
ERBB3-214ENST00000550070 GUCY1A3Q02108 690 aa11.29□□□□□ -0.6
ERBB3-214ENST00000550070 SF3B2Q13435 895 aaKnown RBP11.29□□□□□ -0.6
ERBB3-214ENST00000550070 CD302Q8IX05 232 aa11.29□□□□□ -0.6
ERBB3-214ENST00000550070 LRRC47Q8N1G4 583 aaKnown RBP11.29□□□□□ -0.6
ERBB3-214ENST00000550070 ZNF713Q8N859 430 aaPredicted RBP11.29□□□□□ -0.6
ERBB3-214ENST00000550070 NCAPGQ9BPX3 1015 aa11.29□□□□□ -0.6
ERBB3-214ENST00000550070 GPCPD1Q9NPB8 672 aa11.29□□□□□ -0.6
ERBB3-214ENST00000550070 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.29□□□□□ -0.6
ERBB3-214ENST00000550070 TNRC6CQ9HCJ0 1690 aaKnown RBP11.29□□□□□ -0.6
ERBB3-214ENST00000550070 ATAD5Q96QE3 1844 aa11.29□□□□□ -0.6
ERBB3-214ENST00000550070 MYH7BA7E2Y1 1941 aa11.29□□□□□ -0.6
ERBB3-214ENST00000550070 A6NNZ2 444 aa11.29□□□□□ -0.6
ERBB3-214ENST00000550070 RGL2O15211 777 aa11.29□□□□□ -0.6
ERBB3-214ENST00000550070 SH3BP5O60239 455 aa11.29□□□□□ -0.6
ERBB3-214ENST00000550070 HOXA7P31268 230 aaPredicted RBP11.29□□□□□ -0.6
ERBB3-214ENST00000550070 GTF2A1P52655 376 aaPredicted RBP11.29□□□□□ -0.6
ERBB3-214ENST00000550070 KLHL30Q0D2K2 578 aa11.29□□□□□ -0.6
ERBB3-214ENST00000550070 TUBB8Q3ZCM7 444 aa11.29□□□□□ -0.6
ERBB3-214ENST00000550070 PPP4R3AQ6IN85 833 aa11.29□□□□□ -0.6
ERBB3-214ENST00000550070 ZNF804AQ7Z570 1209 aa11.29□□□□□ -0.6
ERBB3-214ENST00000550070 CEP63Q96MT8 703 aa11.29□□□□□ -0.6
ERBB3-214ENST00000550070 GANQ9H2C0 597 aa11.29□□□□□ -0.6
ERBB3-214ENST00000550070 LUC7LQ9NQ29 371 aaKnown RBP11.29□□□□□ -0.6
ERBB3-214ENST00000550070 AIPL1Q9NZN9 384 aa11.29□□□□□ -0.6
ERBB3-214ENST00000550070 DDX25Q9UHL0 483 aaKnown RBP11.29□□□□□ -0.6
ERBB3-214ENST00000550070 PPP1R11O60927 126 aaPredicted RBP11.28□□□□□ -0.6
ERBB3-214ENST00000550070 INPP5BP32019 993 aa11.28□□□□□ -0.6
ERBB3-214ENST00000550070 LSP1P33241 339 aa11.28□□□□□ -0.6
ERBB3-214ENST00000550070 MARSP56192 900 aaKnown RBP11.28□□□□□ -0.6
ERBB3-214ENST00000550070 EIF6P56537 245 aaKnown RBP11.28□□□□□ -0.6
ERBB3-214ENST00000550070 EMC10Q5UCC4 262 aa11.28□□□□□ -0.6
ERBB3-214ENST00000550070 AMIGO3Q86WK7 504 aa11.28□□□□□ -0.6
ERBB3-214ENST00000550070 CLEC10AQ8IUN9 316 aa11.28□□□□□ -0.6
ERBB3-214ENST00000550070 KLHL7Q8IXQ5 586 aa11.28□□□□□ -0.6
ERBB3-214ENST00000550070 USP38Q8NB14 1042 aa11.28□□□□□ -0.6
ERBB3-214ENST00000550070 TMEM59LQ9UK28 342 aa11.28□□□□□ -0.6
ERBB3-214ENST00000550070 RPS6KA4O75676 772 aa11.28□□□□□ -0.6
ERBB3-214ENST00000550070 MYBP10242 640 aa11.28□□□□□ -0.6
ERBB3-214ENST00000550070 CLK2P49760 499 aaKnown RBP11.28□□□□□ -0.6
ERBB3-214ENST00000550070 SEPT2Q15019 361 aa11.28□□□□□ -0.6
ERBB3-214ENST00000550070 FBXW10Q5XX13 1052 aa11.28□□□□□ -0.6
ERBB3-214ENST00000550070 MMS22LQ6ZRQ5 1243 aa11.28□□□□□ -0.6
ERBB3-214ENST00000550070 DNAAF5Q86Y56 855 aa11.28□□□□□ -0.6
ERBB3-214ENST00000550070 WHAMMQ8TF30 809 aa11.28□□□□□ -0.6
ERBB3-214ENST00000550070 SCFD1Q8WVM8 642 aa11.28□□□□□ -0.6
ERBB3-214ENST00000550070 KCTD10Q9H3F6 313 aa11.28□□□□□ -0.6
ERBB3-214ENST00000550070 GOLPH3Q9H4A6 298 aa11.28□□□□□ -0.6
ERBB3-214ENST00000550070 MTMR4Q9NYA4 1195 aa11.28□□□□□ -0.6
ERBB3-214ENST00000550070 PCDHA12Q9UN75 941 aa11.28□□□□□ -0.6
ERBB3-214ENST00000550070 ZNF831Q5JPB2 1677 aa11.28□□□□□ -0.6
ERBB3-214ENST00000550070 GNA14O95837 355 aa11.27□□□□□ -0.61
ERBB3-214ENST00000550070 ACTN1P12814 892 aa11.27□□□□□ -0.61
ERBB3-214ENST00000550070 NR1D1P20393 614 aa11.27□□□□□ -0.61
ERBB3-214ENST00000550070 GRAPQ13588 217 aa11.27□□□□□ -0.61
ERBB3-214ENST00000550070 ASIC2Q16515 512 aa11.27□□□□□ -0.61
ERBB3-214ENST00000550070 SUGP1Q8IWZ8 645 aaKnown RBP11.27□□□□□ -0.61
ERBB3-214ENST00000550070 GRAPLQ8TC17 118 aaPredicted RBP11.27□□□□□ -0.61
ERBB3-214ENST00000550070 ATP6V1G3Q96LB4 118 aa11.27□□□□□ -0.61
ERBB3-214ENST00000550070 JMJD4Q9H9V9 463 aa11.27□□□□□ -0.61
ERBB3-214ENST00000550070 KIAA1024Q9UPX6 916 aa11.27□□□□□ -0.61
ERBB3-214ENST00000550070 NHSQ6T4R5 1651 aa11.27□□□□□ -0.61
ERBB3-214ENST00000550070 ARFGEF1Q9Y6D6 1849 aa11.27□□□□□ -0.61
ERBB3-214ENST00000550070 KCNK3O14649 394 aa11.27□□□□□ -0.61
ERBB3-214ENST00000550070 CREB3O43889 395 aa11.27□□□□□ -0.61
ERBB3-214ENST00000550070 PAX7P23759 505 aa11.27□□□□□ -0.61
ERBB3-214ENST00000550070 PTK2Q05397 1052 aa11.27□□□□□ -0.61
ERBB3-214ENST00000550070 KCNH2Q12809 1159 aa11.27□□□□□ -0.61
ERBB3-214ENST00000550070 ADAM9Q13443 819 aa11.27□□□□□ -0.61
ERBB3-214ENST00000550070 ASPRV1Q53RT3 343 aa11.27□□□□□ -0.61
ERBB3-214ENST00000550070 HERC4Q5GLZ8 1057 aaPredicted RBP11.27□□□□□ -0.61
ERBB3-214ENST00000550070 HYIQ5T013 277 aa11.27□□□□□ -0.61
ERBB3-214ENST00000550070 DPY19L2P1Q6NXN4 242 aa11.27□□□□□ -0.61
ERBB3-214ENST00000550070 B4GALNT4Q76KP1 1039 aa11.27□□□□□ -0.61
ERBB3-214ENST00000550070 ADGRF4Q8IZF3 695 aa11.27□□□□□ -0.61
ERBB3-214ENST00000550070 EPN3Q9H201 632 aa11.27□□□□□ -0.61
ERBB3-214ENST00000550070 QTRT2Q9H974 415 aaKnown RBP11.27□□□□□ -0.61
ERBB3-214ENST00000550070 ARHGEF10LQ9HCE6 1279 aa11.27□□□□□ -0.61
ERBB3-214ENST00000550070 CD209Q9NNX6 404 aa11.27□□□□□ -0.61
ERBB3-214ENST00000550070 BMP2KQ9NSY1 1161 aaPredicted RBP11.27□□□□□ -0.61
ERBB3-214ENST00000550070 EMILIN3Q9NT22 766 aa11.27□□□□□ -0.61
ERBB3-214ENST00000550070 PLAAQ9Y263 795 aa11.27□□□□□ -0.61
ERBB3-214ENST00000550070 PNMA6FA0A0J9YX94 578 aa11.26□□□□□ -0.61
ERBB3-214ENST00000550070 GNPATO15228 680 aa11.26□□□□□ -0.61
ERBB3-214ENST00000550070 PLA2G4BP0C869 781 aa11.26□□□□□ -0.61
ERBB3-214ENST00000550070 SNHG28P0DPA3 235 aa11.26□□□□□ -0.61
ERBB3-214ENST00000550070 ECHS1P30084 290 aa11.26□□□□□ -0.61
ERBB3-214ENST00000550070 HSPA9P38646 679 aaKnown RBP11.26□□□□□ -0.61
ERBB3-214ENST00000550070 SEC24CP53992 1094 aa11.26□□□□□ -0.61
ERBB3-214ENST00000550070 ERVK-9P63128 1117 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms