RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 SEPT1Q8WYJ6 367 aa11.35□□□□□ -0.59
TRAFD1-207ENST00000550051 P2RX5Q93086 422 aa11.35□□□□□ -0.59
TRAFD1-207ENST00000550051 GPRASP2Q96D09 838 aa11.35□□□□□ -0.59
TRAFD1-207ENST00000550051 CDHR1Q96JP9 859 aa11.35□□□□□ -0.59
TRAFD1-207ENST00000550051 POP1Q99575 1024 aaKnown RBP11.35□□□□□ -0.59
TRAFD1-207ENST00000550051 SPZ1Q9BXG8 430 aa11.35□□□□□ -0.59
TRAFD1-207ENST00000550051 ERAP1Q9NZ08 941 aa11.35□□□□□ -0.59
TRAFD1-207ENST00000550051 PLAGL2Q9UPG8 496 aa11.35□□□□□ -0.59
TRAFD1-207ENST00000550051 ADGRA3Q8IWK6 1321 aa11.35□□□□□ -0.59
TRAFD1-207ENST00000550051 GSTTP1A0A1W2PQM5 241 aa11.34□□□□□ -0.59
TRAFD1-207ENST00000550051 E7EWF7 191 aa11.34□□□□□ -0.59
TRAFD1-207ENST00000550051 MBTPS2O43462 519 aa11.34□□□□□ -0.59
TRAFD1-207ENST00000550051 ATP9AO75110 1047 aa11.34□□□□□ -0.59
TRAFD1-207ENST00000550051 GHRP10912 638 aa11.34□□□□□ -0.59
TRAFD1-207ENST00000550051 KCNA2P16389 499 aa11.34□□□□□ -0.59
TRAFD1-207ENST00000550051 TCF7P36402 384 aaPredicted RBP11.34□□□□□ -0.59
TRAFD1-207ENST00000550051 DLX2Q07687 328 aaPredicted RBP11.34□□□□□ -0.59
TRAFD1-207ENST00000550051 CAMK1Q14012 370 aa11.34□□□□□ -0.59
TRAFD1-207ENST00000550051 HERC4Q5GLZ8 1057 aaPredicted RBP11.34□□□□□ -0.59
TRAFD1-207ENST00000550051 FBXO47Q5MNV8 452 aa11.34□□□□□ -0.59
TRAFD1-207ENST00000550051 USP17L6PQ6QN14 398 aa11.34□□□□□ -0.59
TRAFD1-207ENST00000550051 RUFY4Q6ZNE9 571 aa11.34□□□□□ -0.59
TRAFD1-207ENST00000550051 RTN4RL1Q86UN2 441 aaPredicted RBP11.34□□□□□ -0.59
TRAFD1-207ENST00000550051 NCOA7Q8NI08 942 aa11.34□□□□□ -0.59
TRAFD1-207ENST00000550051 SMARCC2Q8TAQ2 1214 aa11.34□□□□□ -0.59
TRAFD1-207ENST00000550051 RUFY2Q8WXA3 655 aa11.34□□□□□ -0.59
TRAFD1-207ENST00000550051 CUL5Q93034 780 aa11.34□□□□□ -0.59
TRAFD1-207ENST00000550051 MFSD14AQ96MC6 490 aa11.34□□□□□ -0.59
TRAFD1-207ENST00000550051 LZTS2Q9BRK4 669 aa11.34□□□□□ -0.59
TRAFD1-207ENST00000550051 SMARCAD1Q9H4L7 1026 aa11.34□□□□□ -0.59
TRAFD1-207ENST00000550051 SUPT16HQ9Y5B9 1047 aaKnown RBP11.34□□□□□ -0.59
TRAFD1-207ENST00000550051 RRN3P2A6NIE6 340 aa11.33□□□□□ -0.6
TRAFD1-207ENST00000550051 EYA4O95677 639 aa11.33□□□□□ -0.6
TRAFD1-207ENST00000550051 MMP1P03956 469 aa11.33□□□□□ -0.6
TRAFD1-207ENST00000550051 ITGB5P18084 799 aa11.33□□□□□ -0.6
TRAFD1-207ENST00000550051 MRE11P49959 708 aa11.33□□□□□ -0.6
TRAFD1-207ENST00000550051 NHLH1Q02575 133 aa11.33□□□□□ -0.6
TRAFD1-207ENST00000550051 PTH1RQ03431 593 aa11.33□□□□□ -0.6
TRAFD1-207ENST00000550051 PPFIA1Q13136 1202 aa11.33□□□□□ -0.6
TRAFD1-207ENST00000550051 SMAD4Q13485 552 aaKnown RBP11.33□□□□□ -0.6
TRAFD1-207ENST00000550051 BTG3Q14201 252 aaPredicted RBP11.33□□□□□ -0.6
TRAFD1-207ENST00000550051 GRIK4Q16099 956 aa11.33□□□□□ -0.6
TRAFD1-207ENST00000550051 TSHZ1Q6ZSZ6 1077 aa11.33□□□□□ -0.6
TRAFD1-207ENST00000550051 BMP8AQ7Z5Y6 402 aa11.33□□□□□ -0.6
TRAFD1-207ENST00000550051 RALYLQ86SE5 291 aaKnown RBP11.33□□□□□ -0.6
TRAFD1-207ENST00000550051 TMTC2Q8N394 836 aa11.33□□□□□ -0.6
TRAFD1-207ENST00000550051 DNAJB3Q8WWF6 145 aa11.33□□□□□ -0.6
TRAFD1-207ENST00000550051 RRP36Q96EU6 259 aaKnown RBP11.33□□□□□ -0.6
TRAFD1-207ENST00000550051 FBXL18Q96ME1 805 aa11.33□□□□□ -0.6
TRAFD1-207ENST00000550051 MTA3Q9BTC8 594 aa11.33□□□□□ -0.6
TRAFD1-207ENST00000550051 FTHL17Q9BXU8 183 aa11.33□□□□□ -0.6
TRAFD1-207ENST00000550051 TUBE1Q9UJT0 475 aa11.33□□□□□ -0.6
TRAFD1-207ENST00000550051 CHMLP26374 656 aa11.32□□□□□ -0.6
TRAFD1-207ENST00000550051 KIF5BP33176 963 aa11.32□□□□□ -0.6
TRAFD1-207ENST00000550051 GNAQP50148 359 aa11.32□□□□□ -0.6
TRAFD1-207ENST00000550051 ANTXR2P58335 489 aa11.32□□□□□ -0.6
TRAFD1-207ENST00000550051 SP4Q02446 784 aa11.32□□□□□ -0.6
TRAFD1-207ENST00000550051 IER5Q5VY09 327 aa11.32□□□□□ -0.6
TRAFD1-207ENST00000550051 HFE2Q6ZVN8 426 aa11.32□□□□□ -0.6
TRAFD1-207ENST00000550051 RNF135Q8IUD6 432 aa11.32□□□□□ -0.6
TRAFD1-207ENST00000550051 CMTR2Q8IYT2 770 aaKnown RBP11.32□□□□□ -0.6
TRAFD1-207ENST00000550051 SPPL3Q8TCT6 385 aa11.32□□□□□ -0.6
TRAFD1-207ENST00000550051 EDAQ92838 391 aa11.32□□□□□ -0.6
TRAFD1-207ENST00000550051 TNPO1Q92973 898 aaKnown RBP11.32□□□□□ -0.6
TRAFD1-207ENST00000550051 MSLNLQ96KJ4 702 aa11.32□□□□□ -0.6
TRAFD1-207ENST00000550051 PSTPIP2Q9H939 334 aa11.32□□□□□ -0.6
TRAFD1-207ENST00000550051 AGO3Q9H9G7 860 aaKnown RBP11.32□□□□□ -0.6
TRAFD1-207ENST00000550051 ALG13Q9NP73 1137 aaKnown RBP11.32□□□□□ -0.6
TRAFD1-207ENST00000550051 CD207Q9UJ71 328 aa11.32□□□□□ -0.6
TRAFD1-207ENST00000550051 UBIAD1Q9Y5Z9 338 aa11.32□□□□□ -0.6
TRAFD1-207ENST00000550051 CDY2AQ9Y6F7 541 aa11.32□□□□□ -0.6
TRAFD1-207ENST00000550051 TAF6LQ9Y6J9 622 aa11.32□□□□□ -0.6
TRAFD1-207ENST00000550051 C5orf42Q9H799 3197 aa11.32□□□□□ -0.6
TRAFD1-207ENST00000550051 ZNF318Q5VUA4 2279 aa11.32□□□□□ -0.6
TRAFD1-207ENST00000550051 LOXHD1Q8IVV2 1947 aa11.31□□□□□ -0.6
TRAFD1-207ENST00000550051 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.31□□□□□ -0.6
TRAFD1-207ENST00000550051 STXBP3O00186 592 aa11.31□□□□□ -0.6
TRAFD1-207ENST00000550051 TBX10O75333 385 aa11.31□□□□□ -0.6
TRAFD1-207ENST00000550051 DDAH1O94760 285 aa11.31□□□□□ -0.6
TRAFD1-207ENST00000550051 INSRRP14616 1297 aa11.31□□□□□ -0.6
TRAFD1-207ENST00000550051 DNAJB1P25685 340 aa11.31□□□□□ -0.6
TRAFD1-207ENST00000550051 GTF2F1P35269 517 aaKnown RBP eCLIP11.31□□□□□ -0.6
TRAFD1-207ENST00000550051 MRPS6P82932 125 aaKnown RBP11.31□□□□□ -0.6
TRAFD1-207ENST00000550051 TTC22Q5TAA0 569 aa11.31□□□□□ -0.6
TRAFD1-207ENST00000550051 NPAS4Q8IUM7 802 aa11.31□□□□□ -0.6
TRAFD1-207ENST00000550051 ZNF654Q8IZM8 581 aa11.31□□□□□ -0.6
TRAFD1-207ENST00000550051 NME8Q8N427 588 aa11.31□□□□□ -0.6
TRAFD1-207ENST00000550051 SRBD1Q8N5C6 995 aaKnown RBP11.31□□□□□ -0.6
TRAFD1-207ENST00000550051 EFHBQ8N7U6 833 aa11.31□□□□□ -0.6
TRAFD1-207ENST00000550051 CTCFLQ8NI51 663 aaPredicted RBP11.31□□□□□ -0.6
TRAFD1-207ENST00000550051 PIBF1Q8WXW3 757 aa11.31□□□□□ -0.6
TRAFD1-207ENST00000550051 GLG1Q92896 1179 aa11.31□□□□□ -0.6
TRAFD1-207ENST00000550051 MAP4K1Q92918 833 aa11.31□□□□□ -0.6
TRAFD1-207ENST00000550051 PPP2R3CQ969Q6 453 aa11.31□□□□□ -0.6
TRAFD1-207ENST00000550051 IGFLR1Q9H665 355 aa11.31□□□□□ -0.6
TRAFD1-207ENST00000550051 LY9Q9HBG7 655 aa11.31□□□□□ -0.6
TRAFD1-207ENST00000550051 JADE2Q9NQC1 790 aa11.31□□□□□ -0.6
TRAFD1-207ENST00000550051 SEC63Q9UGP8 760 aaKnown RBP11.31□□□□□ -0.6
TRAFD1-207ENST00000550051 PCDHA2Q9Y5H9 948 aa11.31□□□□□ -0.6
TRAFD1-207ENST00000550051 LINC01565O15544 149 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms