RNA–Protein interactions for RNA: ENST00000549526.1

SMARCD1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-207ENST00000549526 HIDE1A8MVS5 230 aa9.75□□□□□ -0.85
SMARCD1-207ENST00000549526 MINDY4BA8MYZ0 360 aa9.75□□□□□ -0.85
SMARCD1-207ENST00000549526 FSCN2O14926 492 aa9.75□□□□□ -0.85
SMARCD1-207ENST00000549526 LAMTOR5O43504 91 aa9.75□□□□□ -0.85
SMARCD1-207ENST00000549526 CHRNA1P02708 482 aa9.75□□□□□ -0.85
SMARCD1-207ENST00000549526 STAG3L1P0CL83 205 aa9.75□□□□□ -0.85
SMARCD1-207ENST00000549526 SMIM10L2AP0DMW4 78 aa9.75□□□□□ -0.85
SMARCD1-207ENST00000549526 SMIM10L2BP0DMW5 78 aa9.75□□□□□ -0.85
SMARCD1-207ENST00000549526 CSTF1Q05048 431 aaKnown RBP9.75□□□□□ -0.85
SMARCD1-207ENST00000549526 KANK3Q6NY19 840 aa9.75□□□□□ -0.85
SMARCD1-207ENST00000549526 NPAS4Q8IUM7 802 aa9.75□□□□□ -0.85
SMARCD1-207ENST00000549526 C12orf76Q8N812 135 aaPredicted RBP9.75□□□□□ -0.85
SMARCD1-207ENST00000549526 EMID1Q96A84 441 aaPredicted RBP9.75□□□□□ -0.85
SMARCD1-207ENST00000549526 CHMP4BQ9H444 224 aaKnown RBP9.75□□□□□ -0.85
SMARCD1-207ENST00000549526 SPATA6Q9NWH7 488 aaPredicted RBP9.75□□□□□ -0.85
SMARCD1-207ENST00000549526 PUF60Q9UHX1 559 aaKnown RBP9.75□□□□□ -0.85
SMARCD1-207ENST00000549526 DDX41Q9UJV9 622 aaKnown RBP9.75□□□□□ -0.85
SMARCD1-207ENST00000549526 HCFC2Q9Y5Z7 792 aa9.75□□□□□ -0.85
SMARCD1-207ENST00000549526 RALGAPA1Q6GYQ0 2036 aa9.75□□□□□ -0.85
SMARCD1-207ENST00000549526 NAV2Q8IVL1 2488 aa9.74□□□□□ -0.85
SMARCD1-207ENST00000549526 BPTFQ12830 3046 aa9.74□□□□□ -0.85
SMARCD1-207ENST00000549526 KAT6AQ92794 2004 aa9.74□□□□□ -0.85
SMARCD1-207ENST00000549526 SRRM3A6NNA2 597 aaPredicted RBP9.74□□□□□ -0.85
SMARCD1-207ENST00000549526 H3BRB1 525 aa9.74□□□□□ -0.85
SMARCD1-207ENST00000549526 GOLIM4O00461 696 aa9.74□□□□□ -0.85
SMARCD1-207ENST00000549526 TBC1D4O60343 1298 aa9.74□□□□□ -0.85
SMARCD1-207ENST00000549526 SORBS3O60504 671 aa9.74□□□□□ -0.85
SMARCD1-207ENST00000549526 GNAT1P11488 350 aa9.74□□□□□ -0.85
SMARCD1-207ENST00000549526 IBSPP21815 317 aaPredicted RBP9.74□□□□□ -0.85
SMARCD1-207ENST00000549526 GATMP50440 423 aa9.74□□□□□ -0.85
SMARCD1-207ENST00000549526 LPIN1Q14693 890 aa9.74□□□□□ -0.85
SMARCD1-207ENST00000549526 STXBP2Q15833 593 aa9.74□□□□□ -0.85
SMARCD1-207ENST00000549526 C20orf194Q5TEA3 1177 aa9.74□□□□□ -0.85
SMARCD1-207ENST00000549526 IL31Q6EBC2 164 aa9.74□□□□□ -0.85
SMARCD1-207ENST00000549526 KIAA1841Q6NSI8 718 aa9.74□□□□□ -0.85
SMARCD1-207ENST00000549526 OTOP3Q7RTS5 596 aa9.74□□□□□ -0.85
SMARCD1-207ENST00000549526 KDF1Q8NAX2 398 aaPredicted RBP9.74□□□□□ -0.85
SMARCD1-207ENST00000549526 CLEC4DQ8WXI8 215 aa9.74□□□□□ -0.85
SMARCD1-207ENST00000549526 GPR20Q99678 358 aa9.74□□□□□ -0.85
SMARCD1-207ENST00000549526 EPC1Q9H2F5 836 aa9.74□□□□□ -0.85
SMARCD1-207ENST00000549526 TUT1Q9H6E5 874 aaKnown RBP9.74□□□□□ -0.85
SMARCD1-207ENST00000549526 EHMT1Q9H9B1 1298 aa9.74□□□□□ -0.85
SMARCD1-207ENST00000549526 ZNF287Q9HBT7 754 aa9.74□□□□□ -0.85
SMARCD1-207ENST00000549526 NGRNQ9NPE2 291 aaKnown RBP9.74□□□□□ -0.85
SMARCD1-207ENST00000549526 IGSF5Q9NSI5 407 aa9.74□□□□□ -0.85
SMARCD1-207ENST00000549526 ARPP21Q9UBL0 812 aaPredicted RBP9.74□□□□□ -0.85
SMARCD1-207ENST00000549526 FBXO4Q9UKT5 387 aa9.74□□□□□ -0.85
SMARCD1-207ENST00000549526 LRFN2Q9ULH4 789 aa9.74□□□□□ -0.85
SMARCD1-207ENST00000549526 MTMR7Q9Y216 660 aa9.74□□□□□ -0.85
SMARCD1-207ENST00000549526 CNOT1A5YKK6 2376 aaKnown RBP9.74□□□□□ -0.85
SMARCD1-207ENST00000549526 ITPR1Q14643 2758 aa9.73□□□□□ -0.85
SMARCD1-207ENST00000549526 PRDM1O75626 825 aa9.73□□□□□ -0.85
SMARCD1-207ENST00000549526 GLULP15104 373 aa9.73□□□□□ -0.85
SMARCD1-207ENST00000549526 SLC16A2P36021 539 aa9.73□□□□□ -0.85
SMARCD1-207ENST00000549526 PHLDB3Q6NSJ2 640 aa9.73□□□□□ -0.85
SMARCD1-207ENST00000549526 TMC7Q7Z402 723 aa9.73□□□□□ -0.85
SMARCD1-207ENST00000549526 SPATA33Q96N06 139 aa9.73□□□□□ -0.85
SMARCD1-207ENST00000549526 DNAJC2Q99543 621 aaKnown RBP9.73□□□□□ -0.85
SMARCD1-207ENST00000549526 C16orf70Q9BSU1 422 aa9.73□□□□□ -0.85
SMARCD1-207ENST00000549526 RANBP17Q9H2T7 1088 aaKnown RBP9.73□□□□□ -0.85
SMARCD1-207ENST00000549526 ZBTB40Q9NUA8 1239 aa9.73□□□□□ -0.85
SMARCD1-207ENST00000549526 SETD4Q9NVD3 440 aa9.73□□□□□ -0.85
SMARCD1-207ENST00000549526 ZSCAN32Q9NX65 697 aa9.73□□□□□ -0.85
SMARCD1-207ENST00000549526 IGSF9Q9P2J2 1179 aa9.73□□□□□ -0.85
SMARCD1-207ENST00000549526 RAB23Q9ULC3 237 aa9.73□□□□□ -0.85
SMARCD1-207ENST00000549526 EXOC6BQ9Y2D4 811 aa9.73□□□□□ -0.85
SMARCD1-207ENST00000549526 NOP58Q9Y2X3 529 aaKnown RBP9.73□□□□□ -0.85
SMARCD1-207ENST00000549526 MRVI1Q9Y6F6 885 aa9.73□□□□□ -0.85
SMARCD1-207ENST00000549526 MIA3Q5JRA6 1907 aa9.73□□□□□ -0.85
SMARCD1-207ENST00000549526 TAF4O00268 1085 aa9.72□□□□□ -0.85
SMARCD1-207ENST00000549526 LRRN2O75325 713 aa9.72□□□□□ -0.85
SMARCD1-207ENST00000549526 HMMRO75330 724 aa9.72□□□□□ -0.85
SMARCD1-207ENST00000549526 TSPY3P0CV98 308 aa9.72□□□□□ -0.85
SMARCD1-207ENST00000549526 TSPY8P0CW00 308 aa9.72□□□□□ -0.85
SMARCD1-207ENST00000549526 HOXC8P31273 242 aa9.72□□□□□ -0.85
SMARCD1-207ENST00000549526 NONOQ15233 471 aaKnown RBP eCLIP9.72□□□□□ -0.85
SMARCD1-207ENST00000549526 HSDL1Q3SXM5 330 aa9.72□□□□□ -0.85
SMARCD1-207ENST00000549526 RTN4RL1Q86UN2 441 aaPredicted RBP9.72□□□□□ -0.85
SMARCD1-207ENST00000549526 ZBTB44Q8NCP5 570 aa9.72□□□□□ -0.85
SMARCD1-207ENST00000549526 PJA1Q8NG27 643 aa9.72□□□□□ -0.85
SMARCD1-207ENST00000549526 NSUN6Q8TEA1 469 aaKnown RBP9.72□□□□□ -0.85
SMARCD1-207ENST00000549526 RSAD2Q8WXG1 361 aa9.72□□□□□ -0.85
SMARCD1-207ENST00000549526 MRPS27Q92552 414 aaKnown RBP9.72□□□□□ -0.85
SMARCD1-207ENST00000549526 KIF12Q96FN5 646 aa9.72□□□□□ -0.85
SMARCD1-207ENST00000549526 BCL11AQ9H165 835 aa9.72□□□□□ -0.85
SMARCD1-207ENST00000549526 LZTS1Q9Y250 596 aa9.72□□□□□ -0.85
SMARCD1-207ENST00000549526 DMXL2Q8TDJ6 3036 aa9.72□□□□□ -0.85
SMARCD1-207ENST00000549526 HELZ2Q9BYK8 2649 aaKnown RBP9.72□□□□□ -0.85
SMARCD1-207ENST00000549526 FNDC1Q4ZHG4 1894 aaPredicted RBP9.72□□□□□ -0.85
SMARCD1-207ENST00000549526 WDFY3Q8IZQ1 3526 aa9.72□□□□□ -0.85
SMARCD1-207ENST00000549526 DENND4AQ7Z401 1863 aa9.71□□□□□ -0.85
SMARCD1-207ENST00000549526 GDF9O60383 454 aa9.71□□□□□ -0.86
SMARCD1-207ENST00000549526 HOXD8P13378 290 aaPredicted RBP9.71□□□□□ -0.86
SMARCD1-207ENST00000549526 CA8P35219 290 aa9.71□□□□□ -0.86
SMARCD1-207ENST00000549526 ADD2P35612 726 aa9.71□□□□□ -0.86
SMARCD1-207ENST00000549526 ARHGAP4P98171 946 aa9.71□□□□□ -0.86
SMARCD1-207ENST00000549526 KRT17Q04695 432 aa9.71□□□□□ -0.86
SMARCD1-207ENST00000549526 LPAL2Q16609 132 aa9.71□□□□□ -0.86
SMARCD1-207ENST00000549526 CCDC96Q2M329 555 aa9.71□□□□□ -0.86
SMARCD1-207ENST00000549526 SBK1Q52WX2 424 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms