RNA–Protein interactions for RNA: ENST00000549308.5

PTPRR-209, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-209ENST00000549308 CYFIP1Q7L576 1253 aa13.46□□□□□ -0.25
PTPRR-209ENST00000549308 DHX40Q8IX18 779 aaKnown RBP13.46□□□□□ -0.25
PTPRR-209ENST00000549308 FBXO16Q8IX29 292 aaPredicted RBP13.46□□□□□ -0.25
PTPRR-209ENST00000549308 CAPNS2Q96L46 248 aa13.46□□□□□ -0.25
PTPRR-209ENST00000549308 CREBZFQ9NS37 354 aa13.46□□□□□ -0.25
PTPRR-209ENST00000549308 SLC5A4Q9NY91 659 aa13.46□□□□□ -0.25
PTPRR-209ENST00000549308 PCDHA10Q9Y5I2 948 aa13.46□□□□□ -0.25
PTPRR-209ENST00000549308 DOCK5Q9H7D0 1870 aa13.46□□□□□ -0.25
PTPRR-209ENST00000549308 ZNF236Q9UL36 1845 aa13.46□□□□□ -0.26
PTPRR-209ENST00000549308 RASSF10A6NK89 507 aa13.46□□□□□ -0.26
PTPRR-209ENST00000549308 CA12O43570 354 aa13.46□□□□□ -0.26
PTPRR-209ENST00000549308 AOC2O75106 756 aa13.46□□□□□ -0.26
PTPRR-209ENST00000549308 TGFB3P10600 412 aa13.46□□□□□ -0.26
PTPRR-209ENST00000549308 UBA1P22314 1058 aaKnown RBP13.46□□□□□ -0.26
PTPRR-209ENST00000549308 APLP1P51693 650 aa13.46□□□□□ -0.26
PTPRR-209ENST00000549308 ACTR2P61160 394 aa13.46□□□□□ -0.26
PTPRR-209ENST00000549308 PSMC5P62195 406 aa13.46□□□□□ -0.26
PTPRR-209ENST00000549308 SP2Q02086 613 aa13.46□□□□□ -0.26
PTPRR-209ENST00000549308 CT47A1Q5JQC4 288 aaPredicted RBP13.46□□□□□ -0.26
PTPRR-209ENST00000549308 ZNF467Q7Z7K2 595 aaPredicted RBP13.46□□□□□ -0.26
PTPRR-209ENST00000549308 SMYD4Q8IYR2 804 aaPredicted RBP13.46□□□□□ -0.26
PTPRR-209ENST00000549308 GTPBP4Q9BZE4 634 aaKnown RBP13.46□□□□□ -0.26
PTPRR-209ENST00000549308 BCAS3Q9H6U6 928 aa13.46□□□□□ -0.26
PTPRR-209ENST00000549308 WRAP73Q9P2S5 460 aaPredicted RBP13.46□□□□□ -0.26
PTPRR-209ENST00000549308 DIS3Q9Y2L1 958 aaKnown RBP13.46□□□□□ -0.26
PTPRR-209ENST00000549308 GDAQ9Y2T3 454 aa13.46□□□□□ -0.26
PTPRR-209ENST00000549308 NPHP3-ACAD11A0A0J9YXS1 232 aa13.45□□□□□ -0.26
PTPRR-209ENST00000549308 ARHGEF35A5YM69 484 aa13.45□□□□□ -0.26
PTPRR-209ENST00000549308 DKC1O60832 514 aaKnown RBP eCLIP13.45□□□□□ -0.26
PTPRR-209ENST00000549308 ALDH1A1P00352 501 aa13.45□□□□□ -0.26
PTPRR-209ENST00000549308 MYL5Q02045 173 aa13.45□□□□□ -0.26
PTPRR-209ENST00000549308 STIM1Q13586 685 aa13.45□□□□□ -0.26
PTPRR-209ENST00000549308 LY6KQ17RY6 165 aa13.45□□□□□ -0.26
PTPRR-209ENST00000549308 KLHL10Q6JEL2 608 aa13.45□□□□□ -0.26
PTPRR-209ENST00000549308 CCDC65Q8IXS2 484 aa13.45□□□□□ -0.26
PTPRR-209ENST00000549308 DNAJC19Q96DA6 116 aa13.45□□□□□ -0.26
PTPRR-209ENST00000549308 PANK4Q9NVE7 773 aa13.45□□□□□ -0.26
PTPRR-209ENST00000549308 GABBR1Q9UBS5 961 aa13.45□□□□□ -0.26
PTPRR-209ENST00000549308 PPP1R3GB7ZBB8 358 aa13.44□□□□□ -0.26
PTPRR-209ENST00000549308 IKBKBO14920 756 aa13.44□□□□□ -0.26
PTPRR-209ENST00000549308 ZBTB39O15060 712 aa13.44□□□□□ -0.26
PTPRR-209ENST00000549308 LYPLA2O95372 231 aa13.44□□□□□ -0.26
PTPRR-209ENST00000549308 GGPS1O95749 300 aa13.44□□□□□ -0.26
PTPRR-209ENST00000549308 SUPT20HL2P0C7V6 817 aa13.44□□□□□ -0.26
PTPRR-209ENST00000549308 CD44P16070 742 aaKnown RBP13.44□□□□□ -0.26
PTPRR-209ENST00000549308 CACNB1Q02641 598 aaPredicted RBP13.44□□□□□ -0.26
PTPRR-209ENST00000549308 RAD51AP2Q09MP3 1159 aa13.44□□□□□ -0.26
PTPRR-209ENST00000549308 MAP2K5Q13163 448 aa13.44□□□□□ -0.26
PTPRR-209ENST00000549308 UGCGQ16739 394 aa13.44□□□□□ -0.26
PTPRR-209ENST00000549308 ARSHQ5FYA8 562 aa13.44□□□□□ -0.26
PTPRR-209ENST00000549308 C4orf19Q8IY42 314 aa13.44□□□□□ -0.26
PTPRR-209ENST00000549308 NPLOC4Q8TAT6 608 aa13.44□□□□□ -0.26
PTPRR-209ENST00000549308 ATP6V0A1Q93050 837 aa13.44□□□□□ -0.26
PTPRR-209ENST00000549308 MAML3Q96JK9 1138 aa13.44□□□□□ -0.26
PTPRR-209ENST00000549308 CCDC43Q96MW1 224 aaKnown RBP13.44□□□□□ -0.26
PTPRR-209ENST00000549308 ZHX3Q9H4I2 956 aa13.44□□□□□ -0.26
PTPRR-209ENST00000549308 MLXIPQ9HAP2 919 aa13.44□□□□□ -0.26
PTPRR-209ENST00000549308 VTA1Q9NP79 307 aa13.44□□□□□ -0.26
PTPRR-209ENST00000549308 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.44□□□□□ -0.26
PTPRR-209ENST00000549308 DDX41Q9UJV9 622 aaKnown RBP13.44□□□□□ -0.26
PTPRR-209ENST00000549308 CTNND2Q9UQB3 1225 aa13.44□□□□□ -0.26
PTPRR-209ENST00000549308 LOXHD1Q8IVV2 1947 aa13.44□□□□□ -0.26
PTPRR-209ENST00000549308 MCM3APO60318 1980 aa13.43□□□□□ -0.26
PTPRR-209ENST00000549308 BACH1O14867 736 aa13.43□□□□□ -0.26
PTPRR-209ENST00000549308 FARP2O94887 1054 aaPredicted RBP13.43□□□□□ -0.26
PTPRR-209ENST00000549308 ARIH2O95376 493 aa13.43□□□□□ -0.26
PTPRR-209ENST00000549308 TXNP10599 105 aaKnown RBP13.43□□□□□ -0.26
PTPRR-209ENST00000549308 ERCC5P28715 1186 aaPredicted RBP13.43□□□□□ -0.26
PTPRR-209ENST00000549308 STX17P56962 302 aa13.43□□□□□ -0.26
PTPRR-209ENST00000549308 COASYQ13057 564 aa13.43□□□□□ -0.26
PTPRR-209ENST00000549308 PSMD2Q13200 908 aa13.43□□□□□ -0.26
PTPRR-209ENST00000549308 GIT2Q14161 759 aa13.43□□□□□ -0.26
PTPRR-209ENST00000549308 TTLL4Q14679 1199 aa13.43□□□□□ -0.26
PTPRR-209ENST00000549308 MORN1Q5T089 497 aa13.43□□□□□ -0.26
PTPRR-209ENST00000549308 RINT1Q6NUQ1 792 aa13.43□□□□□ -0.26
PTPRR-209ENST00000549308 SWSAP1Q6NVH7 229 aa13.43□□□□□ -0.26
PTPRR-209ENST00000549308 ABHD15Q6UXT9 468 aa13.43□□□□□ -0.26
PTPRR-209ENST00000549308 REM2Q8IYK8 340 aaPredicted RBP13.43□□□□□ -0.26
PTPRR-209ENST00000549308 TRMT44Q8IYL2 757 aaKnown RBP13.43□□□□□ -0.26
PTPRR-209ENST00000549308 SCFD2Q8WU76 684 aa13.43□□□□□ -0.26
PTPRR-209ENST00000549308 RUSC1Q9BVN2 902 aa13.43□□□□□ -0.26
PTPRR-209ENST00000549308 DBR1Q9UK59 544 aaKnown RBP13.43□□□□□ -0.26
PTPRR-209ENST00000549308 MAPK8IP1Q9UQF2 711 aa13.43□□□□□ -0.26
PTPRR-209ENST00000549308 TELO2Q9Y4R8 837 aa13.43□□□□□ -0.26
PTPRR-209ENST00000549308 SYNRGQ9UMZ2 1314 aa13.43□□□□□ -0.26
PTPRR-209ENST00000549308 TNPO2O14787 897 aaKnown RBP13.42□□□□□ -0.26
PTPRR-209ENST00000549308 TBCAO75347 108 aaKnown RBP13.42□□□□□ -0.26
PTPRR-209ENST00000549308 YWHABP31946 246 aaKnown RBP13.42□□□□□ -0.26
PTPRR-209ENST00000549308 PPP1R2P41236 205 aa13.42□□□□□ -0.26
PTPRR-209ENST00000549308 PRCPP42785 496 aa13.42□□□□□ -0.26
PTPRR-209ENST00000549308 PAK1Q13153 545 aa13.42□□□□□ -0.26
PTPRR-209ENST00000549308 METTL7BQ6UX53 244 aa13.42□□□□□ -0.26
PTPRR-209ENST00000549308 MAMDC4Q6UXC1 1216 aa13.42□□□□□ -0.26
PTPRR-209ENST00000549308 TRMT1LQ7Z2T5 733 aaKnown RBP13.42□□□□□ -0.26
PTPRR-209ENST00000549308 DHX37Q8IY37 1157 aaKnown RBP13.42□□□□□ -0.26
PTPRR-209ENST00000549308 ADSSL1Q8N142 457 aa13.42□□□□□ -0.26
PTPRR-209ENST00000549308 ENOX1Q8TC92 643 aaKnown RBP13.42□□□□□ -0.26
PTPRR-209ENST00000549308 HPS3Q969F9 1004 aa13.42□□□□□ -0.26
PTPRR-209ENST00000549308 REEP2Q9BRK0 252 aa13.42□□□□□ -0.26
PTPRR-209ENST00000549308 SLC39A2Q9NP94 309 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms