RNA–Protein interactions for RNA: ENST00000549100.5

DEPDC4-206, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-206ENST00000549100 AMPD3Q01432 767 aa3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 POU4F1Q01851 419 aa3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 ZNF827Q17R98 1081 aa3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 GAB4Q2WGN9 574 aa3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 FNDC3BQ53EP0 1204 aaKnown RBP3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 TM4SF20Q53R12 229 aa3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 TRIM61Q5EBN2 209 aa3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 RTP2Q5QGT7 225 aa3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 CWF19L1Q69YN2 538 aaKnown RBP3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 BRAPQ7Z569 592 aa3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 FGD2Q7Z6J4 655 aa3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 TSPYL5Q86VY4 417 aaPredicted RBP3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 THNSL2Q86YJ6 484 aa3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 NIM1KQ8IY84 436 aa3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 USHBP1Q8N6Y0 703 aa3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 TSPYL6Q8N831 410 aa3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 GSTCDQ8NEC7 633 aa3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 NPLOC4Q8TAT6 608 aa3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 ENOX1Q8TC92 643 aaKnown RBP3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 FRS2Q8WU20 508 aa3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 MYLIPQ8WY64 445 aa3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 KCTD13Q8WZ19 329 aa3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 MFSD3Q96ES6 412 aa3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 PHACTR3Q96KR7 559 aa3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 SLC12A9Q9BXP2 914 aa3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 MRPL4Q9BYD3 311 aaKnown RBP3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 FAM126AQ9BYI3 521 aaPredicted RBP3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 FOXP3Q9BZS1 431 aa3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 TRIM39Q9HCM9 518 aa3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 GPRC5CQ9NQ84 441 aa3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 GPATCH2Q9NW75 528 aa3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 ZSWIM5Q9P217 1185 aa3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 NDOR1Q9UHB4 597 aa3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 SFMBT1Q9UHJ3 866 aa3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 TMEFF2Q9UIK5 374 aaPredicted RBP3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 PLAAQ9Y263 795 aa3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 TRAF6Q9Y4K3 522 aa3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 COL4A3BPQ9Y5P4 624 aa3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 BACE2Q9Y5Z0 518 aa3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 RIMBP3CA6NJZ7 1639 aa3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 RIMBP3BA6NNM3 1639 aa3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 RIMBP3Q9UFD9 1639 aa3.03□□□□□ -1.92
DEPDC4-206ENST00000549100 A0A1W2PP64 1363 aa3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 CLTCQ00610 1675 aaKnown RBP3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 ALKQ9UM73 1620 aa3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 C2orf71A6NGG8 1288 aa3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 KCNQ2O43526 872 aa3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 PEX10O60683 326 aa3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 FKTNO75072 461 aa3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 DNAJC8O75937 253 aaPredicted RBP3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 RASGRP1O95267 797 aa3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 SYPP08247 313 aa3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 VIL1P09327 827 aaKnown RBP3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 PLS3P13797 630 aa3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 HSP90B1P14625 803 aaKnown RBP3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 POU3F3P20264 500 aaPredicted RBP3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 GDF5P43026 501 aa3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 CLCN7P51798 805 aa3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 EXOSC9Q06265 439 aaKnown RBP3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 WDR43Q15061 677 aaKnown RBP eCLIP3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 MBLAC2Q68D91 279 aa3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 KCNT2Q6UVM3 1135 aa3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 ZPBP2Q6X784 338 aa3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 USP53Q70EK8 1073 aa3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 THAP5Q7Z6K1 395 aa3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 MORC1Q86VD1 984 aa3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 ZNF575Q86XF7 245 aa3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 CCDC103Q8IW40 242 aa3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 PPIL6Q8IXY8 311 aa3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 LINC00116Q8NCU8 138 aa3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 UBE2FQ969M7 185 aa3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 SCLYQ96I15 445 aa3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 PRAM1Q96QH2 718 aa3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 ALPK1Q96QP1 1244 aa3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 TARS2Q9BW92 718 aaKnown RBP3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 CDK19Q9BWU1 502 aa3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 TRIT1Q9H3H1 467 aaKnown RBP3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 PCDH12Q9NPG4 1184 aa3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 AP5S1Q9NUS5 200 aa3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 DUSP13Q9UII6 198 aa3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 TCFL5Q9UL49 500 aa3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 PCDHA11Q9Y5I1 949 aa3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 ADGRB2O60241 1585 aa3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 PCSK5Q92824 1860 aa3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 ARHGEF40Q8TER5 1519 aa3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 KNDC1Q76NI1 1749 aa3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.02□□□□□ -1.93
DEPDC4-206ENST00000549100 METP08581 1390 aa3.01□□□□□ -1.93
DEPDC4-206ENST00000549100 KANK1Q14678 1352 aa3.01□□□□□ -1.93
DEPDC4-206ENST00000549100 USP32Q8NFA0 1604 aa3.01□□□□□ -1.93
DEPDC4-206ENST00000549100 MAP2P11137 1827 aaKnown RBP3.01□□□□□ -1.93
DEPDC4-206ENST00000549100 TMEM82A0PJX8 343 aa3.01□□□□□ -1.93
DEPDC4-206ENST00000549100 GSG1L2A8MUP6 293 aa3.01□□□□□ -1.93
DEPDC4-206ENST00000549100 CYR61O00622 381 aa3.01□□□□□ -1.93
DEPDC4-206ENST00000549100 PDE8AO60658 829 aa3.01□□□□□ -1.93
DEPDC4-206ENST00000549100 MSCO60682 206 aa3.01□□□□□ -1.93
DEPDC4-206ENST00000549100 CPP00450 1065 aa3.01□□□□□ -1.93
DEPDC4-206ENST00000549100 ESR1P03372 595 aa3.01□□□□□ -1.93
DEPDC4-206ENST00000549100 GSTM1P09488 218 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms