RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 PCYT2Q99447 389 aa10.83□□□□□ -0.68
RAB5B-205ENST00000549034 TRPV6Q9H1D0 765 aa10.83□□□□□ -0.68
RAB5B-205ENST00000549034 KCNMB3Q9NPA1 279 aa10.83□□□□□ -0.68
RAB5B-205ENST00000549034 ZNF302Q9NR11 478 aa10.83□□□□□ -0.68
RAB5B-205ENST00000549034 DISC1Q9NRI5 854 aa10.83□□□□□ -0.68
RAB5B-205ENST00000549034 TRMT13Q9NUP7 481 aaKnown RBP10.83□□□□□ -0.68
RAB5B-205ENST00000549034 ERAP1Q9NZ08 941 aa10.83□□□□□ -0.68
RAB5B-205ENST00000549034 GABBR1Q9UBS5 961 aa10.83□□□□□ -0.68
RAB5B-205ENST00000549034 ZMYND8Q9ULU4 1186 aaPredicted RBP10.83□□□□□ -0.68
RAB5B-205ENST00000549034 PCDHB6Q9Y5E3 794 aa10.83□□□□□ -0.68
RAB5B-205ENST00000549034 ALPK3Q96L96 1907 aa10.83□□□□□ -0.68
RAB5B-205ENST00000549034 BRCA2P51587 3418 aa10.82□□□□□ -0.68
RAB5B-205ENST00000549034 C17orf102A2RUQ5 167 aa10.82□□□□□ -0.68
RAB5B-205ENST00000549034 WDR64B1ANS9 1081 aa10.82□□□□□ -0.68
RAB5B-205ENST00000549034 B4GALT4O60513 344 aa10.82□□□□□ -0.68
RAB5B-205ENST00000549034 F2P00734 622 aa10.82□□□□□ -0.68
RAB5B-205ENST00000549034 CLTBP09497 229 aa10.82□□□□□ -0.68
RAB5B-205ENST00000549034 SFNP31947 248 aa10.82□□□□□ -0.68
RAB5B-205ENST00000549034 JAK3P52333 1124 aa10.82□□□□□ -0.68
RAB5B-205ENST00000549034 ZNF200P98182 395 aaPredicted RBP10.82□□□□□ -0.68
RAB5B-205ENST00000549034 PTGISQ16647 500 aa10.82□□□□□ -0.68
RAB5B-205ENST00000549034 FOXD4L5Q5VV16 416 aaPredicted RBP10.82□□□□□ -0.68
RAB5B-205ENST00000549034 NCAPH2Q6IBW4 605 aa10.82□□□□□ -0.68
RAB5B-205ENST00000549034 GDF6Q6KF10 455 aaPredicted RBP10.82□□□□□ -0.68
RAB5B-205ENST00000549034 PDXDC2PQ6P474 469 aa10.82□□□□□ -0.68
RAB5B-205ENST00000549034 SH3RF1Q7Z6J0 888 aa10.82□□□□□ -0.68
RAB5B-205ENST00000549034 FAM126BQ8IXS8 530 aa10.82□□□□□ -0.68
RAB5B-205ENST00000549034 FOXD4L4Q8WXT5 416 aaPredicted RBP10.82□□□□□ -0.68
RAB5B-205ENST00000549034 SPOCK2Q92563 424 aa10.82□□□□□ -0.68
RAB5B-205ENST00000549034 TNPO1Q92973 898 aaKnown RBP10.82□□□□□ -0.68
RAB5B-205ENST00000549034 MTMR9Q96QG7 549 aa10.82□□□□□ -0.68
RAB5B-205ENST00000549034 TMEM60Q9H2L4 133 aa10.82□□□□□ -0.68
RAB5B-205ENST00000549034 TTC12Q9H892 705 aaPredicted RBP10.82□□□□□ -0.68
RAB5B-205ENST00000549034 SETD4Q9NVD3 440 aa10.82□□□□□ -0.68
RAB5B-205ENST00000549034 MTMR6Q9Y217 621 aa10.82□□□□□ -0.68
RAB5B-205ENST00000549034 NOD1Q9Y239 953 aa10.82□□□□□ -0.68
RAB5B-205ENST00000549034 SCN10AQ9Y5Y9 1956 aa10.82□□□□□ -0.68
RAB5B-205ENST00000549034 WDR81Q562E7 1941 aa10.82□□□□□ -0.68
RAB5B-205ENST00000549034 IGKV6D-21A0A0A0MT36 114 aa10.81□□□□□ -0.68
RAB5B-205ENST00000549034 TRIM43BA6NCK2 446 aa10.81□□□□□ -0.68
RAB5B-205ENST00000549034 H0YGN5 161 aa10.81□□□□□ -0.68
RAB5B-205ENST00000549034 EML1O00423 815 aa10.81□□□□□ -0.68
RAB5B-205ENST00000549034 CD4P01730 458 aa10.81□□□□□ -0.68
RAB5B-205ENST00000549034 SMIM10L2AP0DMW4 78 aa10.81□□□□□ -0.68
RAB5B-205ENST00000549034 SMIM10L2BP0DMW5 78 aa10.81□□□□□ -0.68
RAB5B-205ENST00000549034 PDIA4P13667 645 aaKnown RBP10.81□□□□□ -0.68
RAB5B-205ENST00000549034 RAG1P15918 1043 aa10.81□□□□□ -0.68
RAB5B-205ENST00000549034 TECP42680 631 aa10.81□□□□□ -0.68
RAB5B-205ENST00000549034 IGBP1P78318 339 aa10.81□□□□□ -0.68
RAB5B-205ENST00000549034 PTGDRQ13258 359 aa10.81□□□□□ -0.68
RAB5B-205ENST00000549034 PPP2R5CQ13362 524 aa10.81□□□□□ -0.68
RAB5B-205ENST00000549034 ORC2Q13416 577 aaPredicted RBP10.81□□□□□ -0.68
RAB5B-205ENST00000549034 PLCB4Q15147 1175 aa10.81□□□□□ -0.68
RAB5B-205ENST00000549034 BRAPQ7Z569 592 aa10.81□□□□□ -0.68
RAB5B-205ENST00000549034 CCDC60Q8IWA6 550 aaPredicted RBP10.81□□□□□ -0.68
RAB5B-205ENST00000549034 C4orf32Q8N8J7 132 aa10.81□□□□□ -0.68
RAB5B-205ENST00000549034 TRIM43Q96BQ3 446 aaPredicted RBP10.81□□□□□ -0.68
RAB5B-205ENST00000549034 ZSCAN16Q9H4T2 348 aaPredicted RBP10.81□□□□□ -0.68
RAB5B-205ENST00000549034 NRBP2Q9NSY0 501 aa10.81□□□□□ -0.68
RAB5B-205ENST00000549034 GTF2IRD1Q9UHL9 959 aa10.81□□□□□ -0.68
RAB5B-205ENST00000549034 TRPC6Q9Y210 931 aa10.81□□□□□ -0.68
RAB5B-205ENST00000549034 MAFBQ9Y5Q3 323 aaPredicted RBP10.81□□□□□ -0.68
RAB5B-205ENST00000549034 POTEB3A0JP26 581 aa10.8□□□□□ -0.68
RAB5B-205ENST00000549034 C19orf67A6NJJ6 358 aa10.8□□□□□ -0.68
RAB5B-205ENST00000549034 OR52Z1P0C646 297 aa10.8□□□□□ -0.68
RAB5B-205ENST00000549034 GNAT1P11488 350 aa10.8□□□□□ -0.68
RAB5B-205ENST00000549034 CYP2C9P11712 490 aa10.8□□□□□ -0.68
RAB5B-205ENST00000549034 INSRRP14616 1297 aa10.8□□□□□ -0.68
RAB5B-205ENST00000549034 ATP4AP20648 1035 aa10.8□□□□□ -0.68
RAB5B-205ENST00000549034 SLC26A2P50443 739 aa10.8□□□□□ -0.68
RAB5B-205ENST00000549034 RESTQ13127 1097 aa10.8□□□□□ -0.68
RAB5B-205ENST00000549034 HIC1Q14526 733 aa10.8□□□□□ -0.68
RAB5B-205ENST00000549034 EPHA7Q15375 998 aa10.8□□□□□ -0.68
RAB5B-205ENST00000549034 FAM173BQ6P4H8 233 aa10.8□□□□□ -0.68
RAB5B-205ENST00000549034 POTEBQ6S5H4 581 aa10.8□□□□□ -0.68
RAB5B-205ENST00000549034 B3GNT9Q6UX72 402 aa10.8□□□□□ -0.68
RAB5B-205ENST00000549034 SESTD1Q86VW0 696 aa10.8□□□□□ -0.68
RAB5B-205ENST00000549034 BANK1Q8NDB2 785 aa10.8□□□□□ -0.68
RAB5B-205ENST00000549034 RDM1Q8NG50 284 aa10.8□□□□□ -0.68
RAB5B-205ENST00000549034 AFAP1L1Q8TED9 768 aa10.8□□□□□ -0.68
RAB5B-205ENST00000549034 ATP6V0A1Q93050 837 aa10.8□□□□□ -0.68
RAB5B-205ENST00000549034 PDLIM7Q9NR12 457 aa10.8□□□□□ -0.68
RAB5B-205ENST00000549034 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.8□□□□□ -0.68
RAB5B-205ENST00000549034 PCDH10Q9P2E7 1040 aa10.8□□□□□ -0.68
RAB5B-205ENST00000549034 DAXXQ9UER7 740 aaPredicted RBP10.8□□□□□ -0.68
RAB5B-205ENST00000549034 VAV3Q9UKW4 847 aa10.8□□□□□ -0.68
RAB5B-205ENST00000549034 EMSYQ7Z589 1322 aa10.8□□□□□ -0.68
RAB5B-205ENST00000549034 NRCAMQ92823 1304 aa10.8□□□□□ -0.68
RAB5B-205ENST00000549034 RRN3P2A6NIE6 340 aa10.79□□□□□ -0.68
RAB5B-205ENST00000549034 DDX11L8A8MPP1 907 aa10.79□□□□□ -0.68
RAB5B-205ENST00000549034 KIAA0355O15063 1070 aa10.79□□□□□ -0.68
RAB5B-205ENST00000549034 TREHO43280 583 aa10.79□□□□□ -0.68
RAB5B-205ENST00000549034 HBP1O60381 514 aa10.79□□□□□ -0.68
RAB5B-205ENST00000549034 P4HBP07237 508 aaKnown RBP10.79□□□□□ -0.68
RAB5B-205ENST00000549034 PSMC5P62195 406 aa10.79□□□□□ -0.68
RAB5B-205ENST00000549034 CEBPZQ03701 1054 aaKnown RBP10.79□□□□□ -0.68
RAB5B-205ENST00000549034 PPFIA1Q13136 1202 aa10.79□□□□□ -0.68
RAB5B-205ENST00000549034 TMEM266Q2M3C6 531 aa10.79□□□□□ -0.68
RAB5B-205ENST00000549034 DTHD1Q6ZMT9 781 aa10.79□□□□□ -0.68
RAB5B-205ENST00000549034 TPH2Q8IWU9 490 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms