RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 TMEM59LQ9UK28 342 aa15.49■□□□□ 0.07
RAPGEF3-218ENST00000548919 HDAC9Q9UKV0 1011 aa15.49■□□□□ 0.07
RAPGEF3-218ENST00000548919 RTCBQ9Y3I0 505 aaKnown RBP15.49■□□□□ 0.07
RAPGEF3-218ENST00000548919 CAPN7Q9Y6W3 813 aa15.49■□□□□ 0.07
RAPGEF3-218ENST00000548919 NRAPQ86VF7 1730 aa15.49■□□□□ 0.07
RAPGEF3-218ENST00000548919 ARFGEF1Q9Y6D6 1849 aa15.49■□□□□ 0.07
RAPGEF3-218ENST00000548919 MYO1FO00160 1098 aa15.49■□□□□ 0.07
RAPGEF3-218ENST00000548919 PPP1R37O75864 691 aa15.49■□□□□ 0.07
RAPGEF3-218ENST00000548919 KIF4AO95239 1232 aa15.49■□□□□ 0.07
RAPGEF3-218ENST00000548919 GNA14O95837 355 aa15.49■□□□□ 0.07
RAPGEF3-218ENST00000548919 SNHG28P0DPA3 235 aa15.49■□□□□ 0.07
RAPGEF3-218ENST00000548919 MYBP10242 640 aa15.49■□□□□ 0.07
RAPGEF3-218ENST00000548919 HSD17B3P37058 310 aa15.49■□□□□ 0.07
RAPGEF3-218ENST00000548919 MARSP56192 900 aaKnown RBP15.49■□□□□ 0.07
RAPGEF3-218ENST00000548919 PSMC6P62333 389 aa15.49■□□□□ 0.07
RAPGEF3-218ENST00000548919 HDLBPQ00341 1268 aaKnown RBP15.49■□□□□ 0.07
RAPGEF3-218ENST00000548919 ITGB3BPQ13352 177 aaPredicted RBP15.49■□□□□ 0.07
RAPGEF3-218ENST00000548919 FOXR2Q6PJQ5 311 aa15.49■□□□□ 0.07
RAPGEF3-218ENST00000548919 RBM46Q8TBY0 533 aaKnown RBP15.49■□□□□ 0.07
RAPGEF3-218ENST00000548919 AJAP1Q9UKB5 411 aaPredicted RBP15.49■□□□□ 0.07
RAPGEF3-218ENST00000548919 UCHL3P15374 230 aa15.48■□□□□ 0.07
RAPGEF3-218ENST00000548919 PLCG2P16885 1265 aa15.48■□□□□ 0.07
RAPGEF3-218ENST00000548919 HNRNPH1P31943 449 aaKnown RBP15.48■□□□□ 0.07
RAPGEF3-218ENST00000548919 FLT3P36888 993 aa15.48■□□□□ 0.07
RAPGEF3-218ENST00000548919 HSPA9P38646 679 aaKnown RBP15.48■□□□□ 0.07
RAPGEF3-218ENST00000548919 UAP1Q16222 522 aaPredicted RBP15.48■□□□□ 0.07
RAPGEF3-218ENST00000548919 DCAF17Q5H9S7 520 aaPredicted RBP15.48■□□□□ 0.07
RAPGEF3-218ENST00000548919 B4GALNT4Q76KP1 1039 aa15.48■□□□□ 0.07
RAPGEF3-218ENST00000548919 CD302Q8IX05 232 aa15.48■□□□□ 0.07
RAPGEF3-218ENST00000548919 OTUD6BQ8N6M0 293 aa15.48■□□□□ 0.07
RAPGEF3-218ENST00000548919 ZNF473Q8WTR7 871 aaKnown RBP15.48■□□□□ 0.07
RAPGEF3-218ENST00000548919 NT5C3AQ9H0P0 336 aa15.48■□□□□ 0.07
RAPGEF3-218ENST00000548919 NHSQ6T4R5 1651 aa15.48■□□□□ 0.07
RAPGEF3-218ENST00000548919 CETN3O15182 167 aa15.48■□□□□ 0.07
RAPGEF3-218ENST00000548919 ITGA4P13612 1032 aa15.48■□□□□ 0.07
RAPGEF3-218ENST00000548919 MDH1P40925 334 aaKnown RBP15.48■□□□□ 0.07
RAPGEF3-218ENST00000548919 DPY19L2P1Q6NXN4 242 aa15.48■□□□□ 0.07
RAPGEF3-218ENST00000548919 GJB7Q6PEY0 223 aa15.48■□□□□ 0.07
RAPGEF3-218ENST00000548919 CCT8L2Q96SF2 557 aa15.48■□□□□ 0.07
RAPGEF3-218ENST00000548919 ISCUQ9H1K1 167 aa15.48■□□□□ 0.07
RAPGEF3-218ENST00000548919 PPANQ9NQ55 473 aaKnown RBP15.48■□□□□ 0.07
RAPGEF3-218ENST00000548919 DDX4Q9NQI0 724 aaKnown RBP15.48■□□□□ 0.07
RAPGEF3-218ENST00000548919 NAGPAQ9UK23 515 aa15.48■□□□□ 0.07
RAPGEF3-218ENST00000548919 TMCO5BA8MYB1 307 aa15.47■□□□□ 0.07
RAPGEF3-218ENST00000548919 E7EVH7 732 aa15.47■□□□□ 0.07
RAPGEF3-218ENST00000548919 KIAA0754O94854 1291 aa15.47■□□□□ 0.07
RAPGEF3-218ENST00000548919 RFC4P35249 363 aa15.47■□□□□ 0.07
RAPGEF3-218ENST00000548919 USP11P51784 963 aa15.47■□□□□ 0.07
RAPGEF3-218ENST00000548919 MRPL12P52815 198 aaKnown RBP15.47■□□□□ 0.07
RAPGEF3-218ENST00000548919 HYIQ5T013 277 aa15.47■□□□□ 0.07
RAPGEF3-218ENST00000548919 LRRC57Q8N9N7 239 aa15.47■□□□□ 0.07
RAPGEF3-218ENST00000548919 DAGLAQ9Y4D2 1042 aa15.47■□□□□ 0.07
RAPGEF3-218ENST00000548919 MEFVO15553 781 aaPredicted RBP15.47■□□□□ 0.07
RAPGEF3-218ENST00000548919 SART1O43290 800 aaKnown RBP15.47■□□□□ 0.07
RAPGEF3-218ENST00000548919 TTLL1O95922 423 aa15.47■□□□□ 0.07
RAPGEF3-218ENST00000548919 HOXD13P35453 343 aa15.47■□□□□ 0.07
RAPGEF3-218ENST00000548919 PABPC4Q13310 644 aaKnown RBP eCLIP15.47■□□□□ 0.07
RAPGEF3-218ENST00000548919 ALKBH5Q6P6C2 394 aaKnown RBP15.47■□□□□ 0.07
RAPGEF3-218ENST00000548919 BARGINQ6ZT62 677 aa15.47■□□□□ 0.07
RAPGEF3-218ENST00000548919 NLRP14Q86W24 1093 aa15.47■□□□□ 0.07
RAPGEF3-218ENST00000548919 METTL13Q8N6R0 699 aa15.47■□□□□ 0.07
RAPGEF3-218ENST00000548919 CNBD1Q8NA66 436 aa15.47■□□□□ 0.07
RAPGEF3-218ENST00000548919 MYCBPAPQ8TBZ2 947 aa15.47■□□□□ 0.07
RAPGEF3-218ENST00000548919 TMBIM4Q9HC24 238 aa15.47■□□□□ 0.07
RAPGEF3-218ENST00000548919 BCCIPQ9P287 314 aaKnown RBP eCLIP15.47■□□□□ 0.07
RAPGEF3-218ENST00000548919 KDM3AQ9Y4C1 1321 aa15.47■□□□□ 0.07
RAPGEF3-218ENST00000548919 MPHOSPH10O00566 681 aaKnown RBP15.47■□□□□ 0.07
RAPGEF3-218ENST00000548919 GUCY2CP25092 1073 aa15.47■□□□□ 0.07
RAPGEF3-218ENST00000548919 PON1P27169 355 aa15.47■□□□□ 0.07
RAPGEF3-218ENST00000548919 SLC12A3P55017 1021 aa15.47■□□□□ 0.07
RAPGEF3-218ENST00000548919 RNF187Q5TA31 235 aaPredicted RBP15.47■□□□□ 0.07
RAPGEF3-218ENST00000548919 TCERG1LQ5VWI1 586 aa15.47■□□□□ 0.07
RAPGEF3-218ENST00000548919 SCFD2Q8WU76 684 aa15.47■□□□□ 0.07
RAPGEF3-218ENST00000548919 ARMCX3Q9UH62 379 aaPredicted RBP15.47■□□□□ 0.07
RAPGEF3-218ENST00000548919 AMACRQ9UHK6 382 aa15.47■□□□□ 0.07
RAPGEF3-218ENST00000548919 CCNL1Q9UK58 526 aaPredicted RBP15.47■□□□□ 0.07
RAPGEF3-218ENST00000548919 NOC2LQ9Y3T9 749 aaKnown RBP15.47■□□□□ 0.07
RAPGEF3-218ENST00000548919 IGKV6D-41A0A0C4DH26 115 aa15.46■□□□□ 0.07
RAPGEF3-218ENST00000548919 A6NNZ2 444 aa15.46■□□□□ 0.07
RAPGEF3-218ENST00000548919 HMGB1P1B2RPK0 211 aaPredicted RBP15.46■□□□□ 0.07
RAPGEF3-218ENST00000548919 BACH1O14867 736 aa15.46■□□□□ 0.07
RAPGEF3-218ENST00000548919 ZBTB5O15062 677 aa15.46■□□□□ 0.07
RAPGEF3-218ENST00000548919 IL1R1P14778 569 aa15.46■□□□□ 0.07
RAPGEF3-218ENST00000548919 GABPAQ06546 454 aa15.46■□□□□ 0.07
RAPGEF3-218ENST00000548919 TUBB8Q3ZCM7 444 aa15.46■□□□□ 0.07
RAPGEF3-218ENST00000548919 RPGRQ92834 1020 aaKnown RBP15.46■□□□□ 0.07
RAPGEF3-218ENST00000548919 IKZF4Q9H2S9 585 aa15.46■□□□□ 0.07
RAPGEF3-218ENST00000548919 DHX36Q9H2U1 1008 aaKnown RBP15.46■□□□□ 0.07
RAPGEF3-218ENST00000548919 LRRC4CQ9HCJ2 640 aa15.46■□□□□ 0.07
RAPGEF3-218ENST00000548919 GOLGA6L10A6NI86 522 aa15.46■□□□□ 0.06
RAPGEF3-218ENST00000548919 H0YGN5 161 aa15.46■□□□□ 0.06
RAPGEF3-218ENST00000548919 CTNNA1P35221 906 aaKnown RBP15.46■□□□□ 0.06
RAPGEF3-218ENST00000548919 EXOC3L4Q17RC7 722 aa15.46■□□□□ 0.06
RAPGEF3-218ENST00000548919 RC3H1Q5TC82 1133 aaKnown RBP15.46■□□□□ 0.06
RAPGEF3-218ENST00000548919 SFR1Q86XK3 245 aa15.46■□□□□ 0.06
RAPGEF3-218ENST00000548919 SUGP1Q8IWZ8 645 aaKnown RBP15.46■□□□□ 0.06
RAPGEF3-218ENST00000548919 PLCB1Q9NQ66 1216 aa15.46■□□□□ 0.06
RAPGEF3-218ENST00000548919 POLLQ9UGP5 575 aa15.46■□□□□ 0.06
RAPGEF3-218ENST00000548919 GGA1Q9UJY5 639 aa15.46■□□□□ 0.06
RAPGEF3-218ENST00000548919 ATF5Q9Y2D1 282 aaPredicted RBP15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms