RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 NDST4Q9H3R1 872 aa23.18■■□□□ 1.3
RITA1-201ENST00000548278 PXMP2Q9NR77 195 aa23.18■■□□□ 1.3
RITA1-201ENST00000548278 RNF181Q9P0P0 153 aa23.18■■□□□ 1.3
RITA1-201ENST00000548278 ZNF214Q9UL59 606 aaPredicted RBP23.18■■□□□ 1.3
RITA1-201ENST00000548278 LUC7L2Q9Y383 392 aaKnown RBP23.18■■□□□ 1.3
RITA1-201ENST00000548278 ADGRG1Q9Y653 693 aa23.18■■□□□ 1.3
RITA1-201ENST00000548278 KLK7P49862 253 aa23.17■■□□□ 1.3
RITA1-201ENST00000548278 ITGB3BPQ13352 177 aaPredicted RBP23.17■■□□□ 1.3
RITA1-201ENST00000548278 DLK2Q6UY11 383 aa23.17■■□□□ 1.3
RITA1-201ENST00000548278 NSMFQ6X4W1 530 aa23.17■■□□□ 1.3
RITA1-201ENST00000548278 PDCD2LQ9BRP1 358 aa23.17■■□□□ 1.3
RITA1-201ENST00000548278 TMOD4Q9NZQ9 345 aa23.17■■□□□ 1.3
RITA1-201ENST00000548278 PKD2L1Q9P0L9 805 aa23.17■■□□□ 1.3
RITA1-201ENST00000548278 DDX39AO00148 427 aaKnown RBP23.17■■□□□ 1.3
RITA1-201ENST00000548278 SNRNP48Q6IEG0 339 aaKnown RBP23.17■■□□□ 1.3
RITA1-201ENST00000548278 CYP26C1Q6V0L0 522 aa23.17■■□□□ 1.3
RITA1-201ENST00000548278 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.17■■□□□ 1.3
RITA1-201ENST00000548278 OR8K1Q8NGG5 319 aa23.17■■□□□ 1.3
RITA1-201ENST00000548278 LXNQ9BS40 222 aa23.17■■□□□ 1.3
RITA1-201ENST00000548278 COL4A3BPQ9Y5P4 624 aa23.17■■□□□ 1.3
RITA1-201ENST00000548278 SNCAIPQ9Y6H5 919 aa23.17■■□□□ 1.3
RITA1-201ENST00000548278 WDR90Q96KV7 1748 aa23.16■■□□□ 1.3
RITA1-201ENST00000548278 ATP2A1O14983 1001 aa23.16■■□□□ 1.3
RITA1-201ENST00000548278 TBCAO75347 108 aaKnown RBP23.16■■□□□ 1.3
RITA1-201ENST00000548278 CCDC175P0C221 793 aa23.16■■□□□ 1.3
RITA1-201ENST00000548278 HOXD13P35453 343 aa23.16■■□□□ 1.3
RITA1-201ENST00000548278 MTMR1Q13613 665 aa23.16■■□□□ 1.3
RITA1-201ENST00000548278 BAATQ14032 418 aaPredicted RBP23.16■■□□□ 1.3
RITA1-201ENST00000548278 TMEM132BQ14DG7 1078 aa23.16■■□□□ 1.3
RITA1-201ENST00000548278 SH3D19Q5HYK7 790 aa23.16■■□□□ 1.3
RITA1-201ENST00000548278 PPP4R3CPQ6ZMV5 832 aa23.16■■□□□ 1.3
RITA1-201ENST00000548278 NEK9Q8TD19 979 aa23.16■■□□□ 1.3
RITA1-201ENST00000548278 PURBQ96QR8 312 aaKnown RBP23.16■■□□□ 1.3
RITA1-201ENST00000548278 BCAS3Q9H6U6 928 aa23.16■■□□□ 1.3
RITA1-201ENST00000548278 GAP43P17677 238 aa23.15■■□□□ 1.3
RITA1-201ENST00000548278 EDRF1Q3B7T1 1238 aa23.15■■□□□ 1.3
RITA1-201ENST00000548278 FIGNQ5HY92 759 aa23.15■■□□□ 1.3
RITA1-201ENST00000548278 LOXHD1Q8IVV2 1947 aa23.15■■□□□ 1.3
RITA1-201ENST00000548278 MYBP10242 640 aa23.15■■□□□ 1.3
RITA1-201ENST00000548278 TRIM21P19474 475 aaKnown RBP23.15■■□□□ 1.3
RITA1-201ENST00000548278 MAP3K9P80192 1104 aa23.15■■□□□ 1.3
RITA1-201ENST00000548278 VGLL4Q14135 290 aa23.15■■□□□ 1.3
RITA1-201ENST00000548278 BMT2Q1RMZ1 405 aa23.15■■□□□ 1.3
RITA1-201ENST00000548278 MIER3Q7Z3K6 550 aa23.15■■□□□ 1.3
RITA1-201ENST00000548278 BANK1Q8NDB2 785 aa23.15■■□□□ 1.3
RITA1-201ENST00000548278 SYT17Q9BSW7 474 aa23.15■■□□□ 1.3
RITA1-201ENST00000548278 MRPL44Q9H9J2 332 aaKnown RBP23.15■■□□□ 1.3
RITA1-201ENST00000548278 POLD4Q9HCU8 107 aa23.15■■□□□ 1.3
RITA1-201ENST00000548278 OLFML3Q9NRN5 406 aa23.15■■□□□ 1.3
RITA1-201ENST00000548278 SIK3Q9Y2K2 1263 aa23.15■■□□□ 1.3
RITA1-201ENST00000548278 PAPPA2Q9BXP8 1791 aa23.15■■□□□ 1.3
RITA1-201ENST00000548278 CTIFO43310 598 aaKnown RBP23.14■■□□□ 1.29
RITA1-201ENST00000548278 GNA14O95837 355 aa23.14■■□□□ 1.29
RITA1-201ENST00000548278 MYCLP12524 364 aaPredicted RBP23.14■■□□□ 1.29
RITA1-201ENST00000548278 YBX3P16989 372 aaKnown RBP eCLIP23.14■■□□□ 1.29
RITA1-201ENST00000548278 MARSP56192 900 aaKnown RBP23.14■■□□□ 1.29
RITA1-201ENST00000548278 KNOP1Q1ED39 458 aaKnown RBP23.14■■□□□ 1.29
RITA1-201ENST00000548278 ARHGEF16Q5VV41 709 aa23.14■■□□□ 1.29
RITA1-201ENST00000548278 AGPAT5Q9NUQ2 364 aa23.14■■□□□ 1.29
RITA1-201ENST00000548278 TRAF3IP3Q9Y228 551 aa23.14■■□□□ 1.29
RITA1-201ENST00000548278 PHLPP2Q6ZVD8 1323 aa23.14■■□□□ 1.29
RITA1-201ENST00000548278 DCPSQ96C86 337 aaKnown RBP23.13■■□□□ 1.29
RITA1-201ENST00000548278 TBC1D22BQ9NU19 505 aa23.13■■□□□ 1.29
RITA1-201ENST00000548278 HOXC10Q9NYD6 342 aa23.13■■□□□ 1.29
RITA1-201ENST00000548278 KCND2Q9NZV8 630 aa23.13■■□□□ 1.29
RITA1-201ENST00000548278 MYPNQ86TC9 1320 aa23.13■■□□□ 1.29
RITA1-201ENST00000548278 PTPRFP10586 1907 aa23.13■■□□□ 1.29
RITA1-201ENST00000548278 A0A1W2PQJ5 194 aa23.13■■□□□ 1.29
RITA1-201ENST00000548278 SPDYE16A6NNV3 312 aaPredicted RBP23.13■■□□□ 1.29
RITA1-201ENST00000548278 ADM5C9JUS6 153 aa23.13■■□□□ 1.29
RITA1-201ENST00000548278 XRRA1Q6P2D8 792 aa23.13■■□□□ 1.29
RITA1-201ENST00000548278 WDR59Q6PJI9 974 aa23.13■■□□□ 1.29
RITA1-201ENST00000548278 RBM46Q8TBY0 533 aaKnown RBP23.13■■□□□ 1.29
RITA1-201ENST00000548278 TSC1Q92574 1164 aa23.13■■□□□ 1.29
RITA1-201ENST00000548278 IQCDQ96DY2 449 aa23.13■■□□□ 1.29
RITA1-201ENST00000548278 PCMTD1Q96MG8 357 aaPredicted RBP23.13■■□□□ 1.29
RITA1-201ENST00000548278 CHP1Q99653 195 aa23.13■■□□□ 1.29
RITA1-201ENST00000548278 TEX13BQ9BXU2 312 aa23.13■■□□□ 1.29
RITA1-201ENST00000548278 SFI1A8K8P3 1242 aa23.12■■□□□ 1.29
RITA1-201ENST00000548278 FANCGO15287 622 aa23.12■■□□□ 1.29
RITA1-201ENST00000548278 PRPF6O94906 941 aaKnown RBP23.12■■□□□ 1.29
RITA1-201ENST00000548278 FAM13AO94988 1023 aa23.12■■□□□ 1.29
RITA1-201ENST00000548278 P4HBP07237 508 aaKnown RBP23.12■■□□□ 1.29
RITA1-201ENST00000548278 ZBED6P86452 979 aa23.12■■□□□ 1.29
RITA1-201ENST00000548278 ADAM9Q13443 819 aa23.12■■□□□ 1.29
RITA1-201ENST00000548278 CCDC40Q4G0X9 1142 aa23.12■■□□□ 1.29
RITA1-201ENST00000548278 SULF1Q8IWU6 871 aa23.12■■□□□ 1.29
RITA1-201ENST00000548278 DNAI1Q9UI46 699 aa23.12■■□□□ 1.29
RITA1-201ENST00000548278 OTOFQ9HC10 1997 aa23.12■■□□□ 1.29
RITA1-201ENST00000548278 ZNF131P52739 623 aa23.12■■□□□ 1.29
RITA1-201ENST00000548278 MEA1Q16626 185 aa23.12■■□□□ 1.29
RITA1-201ENST00000548278 VSIG10LQ86VR7 867 aa23.12■■□□□ 1.29
RITA1-201ENST00000548278 ZSWIM4Q9H7M6 989 aa23.12■■□□□ 1.29
RITA1-201ENST00000548278 PDXKO00764 312 aa23.11■■□□□ 1.29
RITA1-201ENST00000548278 ERCC3P19447 782 aa23.11■■□□□ 1.29
RITA1-201ENST00000548278 C9orf131Q5VYM1 1079 aa23.11■■□□□ 1.29
RITA1-201ENST00000548278 TRIM59Q8IWR1 403 aa23.11■■□□□ 1.29
RITA1-201ENST00000548278 L2HGDHQ9H9P8 463 aa23.11■■□□□ 1.29
RITA1-201ENST00000548278 PARVGQ9HBI0 331 aa23.11■■□□□ 1.29
RITA1-201ENST00000548278 CETN3O15182 167 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms