RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 TLR3O15455 904 aaKnown RBP12.81□□□□□ -0.36
CALCOCO1-208ENST00000547988 F13A1P00488 732 aa12.81□□□□□ -0.36
CALCOCO1-208ENST00000547988 PRPHP41219 470 aa12.81□□□□□ -0.36
CALCOCO1-208ENST00000547988 TXKP42681 527 aa12.81□□□□□ -0.36
CALCOCO1-208ENST00000547988 SPIRE1Q08AE8 756 aa12.81□□□□□ -0.36
CALCOCO1-208ENST00000547988 PTGDRQ13258 359 aa12.81□□□□□ -0.36
CALCOCO1-208ENST00000547988 FAM47CQ5HY64 1035 aa12.81□□□□□ -0.36
CALCOCO1-208ENST00000547988 CCDC60Q8IWA6 550 aaPredicted RBP12.81□□□□□ -0.36
CALCOCO1-208ENST00000547988 FAM126BQ8IXS8 530 aa12.81□□□□□ -0.36
CALCOCO1-208ENST00000547988 C7orf31Q8N865 590 aa12.81□□□□□ -0.36
CALCOCO1-208ENST00000547988 C4orf32Q8N8J7 132 aa12.81□□□□□ -0.36
CALCOCO1-208ENST00000547988 TNPO1Q92973 898 aaKnown RBP12.81□□□□□ -0.36
CALCOCO1-208ENST00000547988 PCYT2Q99447 389 aa12.81□□□□□ -0.36
CALCOCO1-208ENST00000547988 CEP131Q9UPN4 1083 aa12.81□□□□□ -0.36
CALCOCO1-208ENST00000547988 ATP11BQ9Y2G3 1177 aa12.81□□□□□ -0.36
CALCOCO1-208ENST00000547988 SCN5AQ14524 2016 aa12.81□□□□□ -0.36
CALCOCO1-208ENST00000547988 DCDC2CA8MYV0 355 aa12.8□□□□□ -0.36
CALCOCO1-208ENST00000547988 EVI5O60447 810 aa12.8□□□□□ -0.36
CALCOCO1-208ENST00000547988 PQBP1O60828 265 aaKnown RBP12.8□□□□□ -0.36
CALCOCO1-208ENST00000547988 FXR2P51116 673 aaKnown RBP eCLIP12.8□□□□□ -0.36
CALCOCO1-208ENST00000547988 CHMP4BP1P59074 171 aa12.8□□□□□ -0.36
CALCOCO1-208ENST00000547988 ATP2C1P98194 919 aaPredicted RBP12.8□□□□□ -0.36
CALCOCO1-208ENST00000547988 TLE2Q04725 743 aa12.8□□□□□ -0.36
CALCOCO1-208ENST00000547988 TMEM266Q2M3C6 531 aa12.8□□□□□ -0.36
CALCOCO1-208ENST00000547988 SWSAP1Q6NVH7 229 aa12.8□□□□□ -0.36
CALCOCO1-208ENST00000547988 PDXDC2PQ6P474 469 aa12.8□□□□□ -0.36
CALCOCO1-208ENST00000547988 NEK9Q8TD19 979 aa12.8□□□□□ -0.36
CALCOCO1-208ENST00000547988 DPF3Q92784 378 aa12.8□□□□□ -0.36
CALCOCO1-208ENST00000547988 ATP6V0A1Q93050 837 aa12.8□□□□□ -0.36
CALCOCO1-208ENST00000547988 RAB34Q9BZG1 259 aa12.8□□□□□ -0.36
CALCOCO1-208ENST00000547988 RNPEPQ9H4A4 650 aa12.8□□□□□ -0.36
CALCOCO1-208ENST00000547988 GABBR1Q9UBS5 961 aa12.8□□□□□ -0.36
CALCOCO1-208ENST00000547988 DAXXQ9UER7 740 aaPredicted RBP12.8□□□□□ -0.36
CALCOCO1-208ENST00000547988 GTF2IRD1Q9UHL9 959 aa12.8□□□□□ -0.36
CALCOCO1-208ENST00000547988 MAFBQ9Y5Q3 323 aaPredicted RBP12.8□□□□□ -0.36
CALCOCO1-208ENST00000547988 EML1O00423 815 aa12.79□□□□□ -0.36
CALCOCO1-208ENST00000547988 B4GALT4O60513 344 aa12.79□□□□□ -0.36
CALCOCO1-208ENST00000547988 DKC1O60832 514 aaKnown RBP eCLIP12.79□□□□□ -0.36
CALCOCO1-208ENST00000547988 BRD1O95696 1058 aa12.79□□□□□ -0.36
CALCOCO1-208ENST00000547988 CD4P01730 458 aa12.79□□□□□ -0.36
CALCOCO1-208ENST00000547988 CLTBP09497 229 aa12.79□□□□□ -0.36
CALCOCO1-208ENST00000547988 SMIM10L2AP0DMW4 78 aa12.79□□□□□ -0.36
CALCOCO1-208ENST00000547988 SMIM10L2BP0DMW5 78 aa12.79□□□□□ -0.36
CALCOCO1-208ENST00000547988 MARK3P27448 753 aa12.79□□□□□ -0.36
CALCOCO1-208ENST00000547988 HOXC8P31273 242 aa12.79□□□□□ -0.36
CALCOCO1-208ENST00000547988 PKP1Q13835 747 aa12.79□□□□□ -0.36
CALCOCO1-208ENST00000547988 EPHA7Q15375 998 aa12.79□□□□□ -0.36
CALCOCO1-208ENST00000547988 ARL6IP4Q66PJ3 421 aaKnown RBP12.79□□□□□ -0.36
CALCOCO1-208ENST00000547988 NCAPH2Q6IBW4 605 aa12.79□□□□□ -0.36
CALCOCO1-208ENST00000547988 C7orf61Q8IZ16 206 aa12.79□□□□□ -0.36
CALCOCO1-208ENST00000547988 ATP8B4Q8TF62 1192 aa12.79□□□□□ -0.36
CALCOCO1-208ENST00000547988 FAM167AQ96KS9 214 aa12.79□□□□□ -0.36
CALCOCO1-208ENST00000547988 HDAC6Q9UBN7 1215 aa12.79□□□□□ -0.36
CALCOCO1-208ENST00000547988 NRCAMQ92823 1304 aa12.79□□□□□ -0.36
CALCOCO1-208ENST00000547988 COL1A2P08123 1366 aa12.79□□□□□ -0.36
CALCOCO1-208ENST00000547988 POTEB3A0JP26 581 aa12.78□□□□□ -0.36
CALCOCO1-208ENST00000547988 POTEMA6NI47 508 aa12.78□□□□□ -0.36
CALCOCO1-208ENST00000547988 HBP1O60381 514 aa12.78□□□□□ -0.36
CALCOCO1-208ENST00000547988 P4HBP07237 508 aaKnown RBP12.78□□□□□ -0.36
CALCOCO1-208ENST00000547988 GNAT1P11488 350 aa12.78□□□□□ -0.36
CALCOCO1-208ENST00000547988 TECP42680 631 aa12.78□□□□□ -0.36
CALCOCO1-208ENST00000547988 QARSP47897 775 aaKnown RBP12.78□□□□□ -0.36
CALCOCO1-208ENST00000547988 PSMC5P62195 406 aa12.78□□□□□ -0.36
CALCOCO1-208ENST00000547988 FAAP100Q0VG06 881 aa12.78□□□□□ -0.36
CALCOCO1-208ENST00000547988 PDIA5Q14554 519 aa12.78□□□□□ -0.36
CALCOCO1-208ENST00000547988 PLCB4Q15147 1175 aa12.78□□□□□ -0.36
CALCOCO1-208ENST00000547988 SF3A1Q15459 793 aaKnown RBP12.78□□□□□ -0.36
CALCOCO1-208ENST00000547988 PTGISQ16647 500 aa12.78□□□□□ -0.36
CALCOCO1-208ENST00000547988 GDF6Q6KF10 455 aaPredicted RBP12.78□□□□□ -0.36
CALCOCO1-208ENST00000547988 FAM173BQ6P4H8 233 aa12.78□□□□□ -0.36
CALCOCO1-208ENST00000547988 POTEBQ6S5H4 581 aa12.78□□□□□ -0.36
CALCOCO1-208ENST00000547988 DTHD1Q6ZMT9 781 aa12.78□□□□□ -0.36
CALCOCO1-208ENST00000547988 BBXQ8WY36 941 aaPredicted RBP12.78□□□□□ -0.36
CALCOCO1-208ENST00000547988 TRPC6Q9Y210 931 aa12.78□□□□□ -0.36
CALCOCO1-208ENST00000547988 NR2E3Q9Y5X4 410 aa12.78□□□□□ -0.36
CALCOCO1-208ENST00000547988 STK24Q9Y6E0 443 aa12.78□□□□□ -0.36
CALCOCO1-208ENST00000547988 MORC2Q9Y6X9 1032 aaPredicted RBP12.78□□□□□ -0.36
CALCOCO1-208ENST00000547988 C17orf102A2RUQ5 167 aa12.77□□□□□ -0.37
CALCOCO1-208ENST00000547988 RRN3P2A6NIE6 340 aa12.77□□□□□ -0.37
CALCOCO1-208ENST00000547988 OATP04181 439 aa12.77□□□□□ -0.37
CALCOCO1-208ENST00000547988 ATP4AP20648 1035 aa12.77□□□□□ -0.37
CALCOCO1-208ENST00000547988 DDIT3P35638 169 aa12.77□□□□□ -0.37
CALCOCO1-208ENST00000547988 PRKCEQ02156 737 aa12.77□□□□□ -0.37
CALCOCO1-208ENST00000547988 PPFIA1Q13136 1202 aa12.77□□□□□ -0.37
CALCOCO1-208ENST00000547988 GRIK4Q16099 956 aa12.77□□□□□ -0.37
CALCOCO1-208ENST00000547988 UGCGQ16739 394 aa12.77□□□□□ -0.37
CALCOCO1-208ENST00000547988 FOXD4L5Q5VV16 416 aaPredicted RBP12.77□□□□□ -0.37
CALCOCO1-208ENST00000547988 ATL3Q6DD88 541 aa12.77□□□□□ -0.37
CALCOCO1-208ENST00000547988 CKAP2LQ8IYA6 745 aa12.77□□□□□ -0.37
CALCOCO1-208ENST00000547988 IGSF22Q8N9C0 903 aa12.77□□□□□ -0.37
CALCOCO1-208ENST00000547988 BANK1Q8NDB2 785 aa12.77□□□□□ -0.37
CALCOCO1-208ENST00000547988 ERMNQ8TAM6 284 aa12.77□□□□□ -0.37
CALCOCO1-208ENST00000547988 PPP1R13LQ8WUF5 828 aa12.77□□□□□ -0.37
CALCOCO1-208ENST00000547988 LMBR1Q8WVP7 490 aa12.77□□□□□ -0.37
CALCOCO1-208ENST00000547988 FOXD4L4Q8WXT5 416 aaPredicted RBP12.77□□□□□ -0.37
CALCOCO1-208ENST00000547988 ZNF396Q96N95 335 aaPredicted RBP12.77□□□□□ -0.37
CALCOCO1-208ENST00000547988 TRPV6Q9H1D0 765 aa12.77□□□□□ -0.37
CALCOCO1-208ENST00000547988 PDLIM7Q9NR12 457 aa12.77□□□□□ -0.37
CALCOCO1-208ENST00000547988 TRMT13Q9NUP7 481 aaKnown RBP12.77□□□□□ -0.37
CALCOCO1-208ENST00000547988 PRKAG2Q9UGJ0 569 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms