RNA–Protein interactions for RNA: ENST00000547967.5

RNF41-203, Transcript of ring finger protein 41, humanhuman

TSL 1 (best)

Gene RNF41, Length 2,552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-203ENST00000547967 MIER3Q7Z3K6 550 aa13.03□□□□□ -0.32
RNF41-203ENST00000547967 MYCT1Q8N699 235 aa13.03□□□□□ -0.32
RNF41-203ENST00000547967 ACRBPQ8NEB7 543 aa13.03□□□□□ -0.32
RNF41-203ENST00000547967 OR8K1Q8NGG5 319 aa13.03□□□□□ -0.32
RNF41-203ENST00000547967 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.03□□□□□ -0.32
RNF41-203ENST00000547967 DCPSQ96C86 337 aaKnown RBP13.03□□□□□ -0.32
RNF41-203ENST00000547967 CCDC51Q96ER9 411 aa13.03□□□□□ -0.32
RNF41-203ENST00000547967 AFG3L2Q9Y4W6 797 aa13.03□□□□□ -0.32
RNF41-203ENST00000547967 ADGRG1Q9Y653 693 aa13.03□□□□□ -0.32
RNF41-203ENST00000547967 PCNTO95613 3336 aa13.02□□□□□ -0.32
RNF41-203ENST00000547967 DHX15O43143 795 aaKnown RBP13.02□□□□□ -0.32
RNF41-203ENST00000547967 ATP9AO75110 1047 aa13.02□□□□□ -0.32
RNF41-203ENST00000547967 DSG3P32926 999 aa13.02□□□□□ -0.32
RNF41-203ENST00000547967 ADAM9Q13443 819 aa13.02□□□□□ -0.32
RNF41-203ENST00000547967 EPHA7Q15375 998 aa13.02□□□□□ -0.32
RNF41-203ENST00000547967 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.02□□□□□ -0.32
RNF41-203ENST00000547967 SULF1Q8IWU6 871 aa13.02□□□□□ -0.32
RNF41-203ENST00000547967 RIT2Q99578 217 aa13.02□□□□□ -0.32
RNF41-203ENST00000547967 PDCD2LQ9BRP1 358 aa13.02□□□□□ -0.32
RNF41-203ENST00000547967 IKZF4Q9H2S9 585 aa13.02□□□□□ -0.32
RNF41-203ENST00000547967 MMRN2Q9H8L6 949 aa13.02□□□□□ -0.32
RNF41-203ENST00000547967 AGO4Q9HCK5 861 aaKnown RBP13.02□□□□□ -0.32
RNF41-203ENST00000547967 PXMP2Q9NR77 195 aa13.02□□□□□ -0.32
RNF41-203ENST00000547967 ZNF214Q9UL59 606 aaPredicted RBP13.02□□□□□ -0.32
RNF41-203ENST00000547967 CAPN11Q9UMQ6 739 aa13.02□□□□□ -0.32
RNF41-203ENST00000547967 COL4A3BPQ9Y5P4 624 aa13.02□□□□□ -0.32
RNF41-203ENST00000547967 DOCK1Q14185 1865 aa13.02□□□□□ -0.33
RNF41-203ENST00000547967 FANCGO15287 622 aa13.02□□□□□ -0.33
RNF41-203ENST00000547967 HOXD13P35453 343 aa13.02□□□□□ -0.33
RNF41-203ENST00000547967 GNG11P61952 73 aa13.02□□□□□ -0.33
RNF41-203ENST00000547967 NAA30Q147X3 362 aaPredicted RBP13.02□□□□□ -0.33
RNF41-203ENST00000547967 MAN2A1Q16706 1144 aa13.02□□□□□ -0.33
RNF41-203ENST00000547967 TSR1Q2NL82 804 aaKnown RBP13.02□□□□□ -0.33
RNF41-203ENST00000547967 CYP26C1Q6V0L0 522 aa13.02□□□□□ -0.33
RNF41-203ENST00000547967 C1orf186Q6ZWK4 172 aa13.02□□□□□ -0.33
RNF41-203ENST00000547967 TMTC1Q8IUR5 882 aa13.02□□□□□ -0.33
RNF41-203ENST00000547967 SMCR8Q8TEV9 937 aaPredicted RBP13.02□□□□□ -0.33
RNF41-203ENST00000547967 NACC1Q96RE7 527 aa13.02□□□□□ -0.33
RNF41-203ENST00000547967 JADE2Q9NQC1 790 aa13.02□□□□□ -0.33
RNF41-203ENST00000547967 ADARB2Q9NS39 739 aaKnown RBP13.02□□□□□ -0.33
RNF41-203ENST00000547967 PPP2R3BQ9Y5P8 575 aa13.02□□□□□ -0.33
RNF41-203ENST00000547967 UBIAD1Q9Y5Z9 338 aa13.02□□□□□ -0.33
RNF41-203ENST00000547967 EPHB6O15197 1021 aa13.01□□□□□ -0.33
RNF41-203ENST00000547967 FAM13AO94988 1023 aa13.01□□□□□ -0.33
RNF41-203ENST00000547967 KIF20AO95235 890 aa13.01□□□□□ -0.33
RNF41-203ENST00000547967 NR2F2P24468 414 aa13.01□□□□□ -0.33
RNF41-203ENST00000547967 NMT1P30419 496 aaKnown RBP13.01□□□□□ -0.33
RNF41-203ENST00000547967 GTF2F1P35269 517 aaKnown RBP eCLIP13.01□□□□□ -0.33
RNF41-203ENST00000547967 C9orf131Q5VYM1 1079 aa13.01□□□□□ -0.33
RNF41-203ENST00000547967 B3GNT9Q6UX72 402 aa13.01□□□□□ -0.33
RNF41-203ENST00000547967 CATSPERGQ6ZRH7 1159 aa13.01□□□□□ -0.33
RNF41-203ENST00000547967 KSR1Q8IVT5 923 aa13.01□□□□□ -0.33
RNF41-203ENST00000547967 ABL1P00519 1130 aa13.01□□□□□ -0.33
RNF41-203ENST00000547967 BCRP11274 1271 aa13.01□□□□□ -0.33
RNF41-203ENST00000547967 KNOP1Q1ED39 458 aaKnown RBP13.01□□□□□ -0.33
RNF41-203ENST00000547967 ZC2HC1CQ53FD0 456 aaPredicted RBP13.01□□□□□ -0.33
RNF41-203ENST00000547967 WDR59Q6PJI9 974 aa13.01□□□□□ -0.33
RNF41-203ENST00000547967 MOB2Q70IA6 237 aa13.01□□□□□ -0.33
RNF41-203ENST00000547967 REPS2Q8NFH8 660 aa13.01□□□□□ -0.33
RNF41-203ENST00000547967 ERGIC2Q96RQ1 377 aa13.01□□□□□ -0.33
RNF41-203ENST00000547967 WDR24Q96S15 920 aa13.01□□□□□ -0.33
RNF41-203ENST00000547967 TMEM150BA6NC51 233 aa13□□□□□ -0.33
RNF41-203ENST00000547967 SORBS3O60504 671 aa13□□□□□ -0.33
RNF41-203ENST00000547967 FDX1P10109 184 aa13□□□□□ -0.33
RNF41-203ENST00000547967 MAP3K9P80192 1104 aa13□□□□□ -0.33
RNF41-203ENST00000547967 GHRHRQ02643 423 aa13□□□□□ -0.33
RNF41-203ENST00000547967 TREML2Q5T2D2 321 aa13□□□□□ -0.33
RNF41-203ENST00000547967 C12orf42Q96LP6 360 aa13□□□□□ -0.33
RNF41-203ENST00000547967 CRACR2AQ9BSW2 395 aa13□□□□□ -0.33
RNF41-203ENST00000547967 TTYH3Q9C0H2 523 aa13□□□□□ -0.33
RNF41-203ENST00000547967 NOL12Q9UGY1 213 aaKnown RBP eCLIP13□□□□□ -0.33
RNF41-203ENST00000547967 SNCAIPQ9Y6H5 919 aa13□□□□□ -0.33
RNF41-203ENST00000547967 V9GYY5 206 aaPredicted RBP13□□□□□ -0.33
RNF41-203ENST00000547967 ARHGEF35A5YM69 484 aa13□□□□□ -0.33
RNF41-203ENST00000547967 SPDYE16A6NNV3 312 aaPredicted RBP13□□□□□ -0.33
RNF41-203ENST00000547967 CLIC2O15247 247 aa13□□□□□ -0.33
RNF41-203ENST00000547967 PPP1R12BO60237 982 aaPredicted RBP13□□□□□ -0.33
RNF41-203ENST00000547967 DNAJC7Q99615 494 aa13□□□□□ -0.33
RNF41-203ENST00000547967 NUP58Q9BVL2 599 aa13□□□□□ -0.33
RNF41-203ENST00000547967 PARVGQ9HBI0 331 aa13□□□□□ -0.33
RNF41-203ENST00000547967 MAP3K20Q9NYL2 800 aaKnown RBP13□□□□□ -0.33
RNF41-203ENST00000547967 TCEAL9Q9UHQ7 104 aa13□□□□□ -0.33
RNF41-203ENST00000547967 SBF1O95248 1867 aa13□□□□□ -0.33
RNF41-203ENST00000547967 CETN3O15182 167 aa12.99□□□□□ -0.33
RNF41-203ENST00000547967 P4HBP07237 508 aaKnown RBP12.99□□□□□ -0.33
RNF41-203ENST00000547967 NR3C2P08235 984 aa12.99□□□□□ -0.33
RNF41-203ENST00000547967 FECHP22830 423 aa12.99□□□□□ -0.33
RNF41-203ENST00000547967 HOXA7P31268 230 aaPredicted RBP12.99□□□□□ -0.33
RNF41-203ENST00000547967 SP4Q02446 784 aa12.99□□□□□ -0.33
RNF41-203ENST00000547967 UTP14CQ5TAP6 766 aaKnown RBP12.99□□□□□ -0.33
RNF41-203ENST00000547967 EPM2AIP1Q7L775 607 aaPredicted RBP12.99□□□□□ -0.33
RNF41-203ENST00000547967 TEX13BQ9BXU2 312 aa12.99□□□□□ -0.33
RNF41-203ENST00000547967 ELP3Q9H9T3 547 aa12.99□□□□□ -0.33
RNF41-203ENST00000547967 HOXC10Q9NYD6 342 aa12.99□□□□□ -0.33
RNF41-203ENST00000547967 ZNF215Q9UL58 517 aaPredicted RBP12.99□□□□□ -0.33
RNF41-203ENST00000547967 ADAMTS5Q9UNA0 930 aa12.99□□□□□ -0.33
RNF41-203ENST00000547967 SIK3Q9Y2K2 1263 aa12.99□□□□□ -0.33
RNF41-203ENST00000547967 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.99□□□□□ -0.33
RNF41-203ENST00000547967 CSADQ9Y600 493 aa12.99□□□□□ -0.33
RNF41-203ENST00000547967 GOLGA6L9A6NEM1 432 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms