RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 SLC37A4O43826 429 aa21.19■□□□□ 0.98
PRPF40B-206ENST00000547764 GAS7O60861 476 aa21.19■□□□□ 0.98
PRPF40B-206ENST00000547764 ADAM17P78536 824 aa21.19■□□□□ 0.98
PRPF40B-206ENST00000547764 RBL2Q08999 1139 aa21.19■□□□□ 0.98
PRPF40B-206ENST00000547764 PPFIA1Q13136 1202 aa21.19■□□□□ 0.98
PRPF40B-206ENST00000547764 TRIM71Q2Q1W2 868 aaKnown RBP21.19■□□□□ 0.98
PRPF40B-206ENST00000547764 TMEM240Q5SV17 173 aa21.19■□□□□ 0.98
PRPF40B-206ENST00000547764 LRCH2Q5VUJ6 765 aa21.19■□□□□ 0.98
PRPF40B-206ENST00000547764 PPP4R3AQ6IN85 833 aa21.19■□□□□ 0.98
PRPF40B-206ENST00000547764 CCDC60Q8IWA6 550 aaPredicted RBP21.19■□□□□ 0.98
PRPF40B-206ENST00000547764 SMAP1Q8IYB5 467 aaPredicted RBP21.19■□□□□ 0.98
PRPF40B-206ENST00000547764 AFAP1L1Q8TED9 768 aa21.19■□□□□ 0.98
PRPF40B-206ENST00000547764 LMBR1Q8WVP7 490 aa21.19■□□□□ 0.98
PRPF40B-206ENST00000547764 VWCEQ96DN2 955 aa21.19■□□□□ 0.98
PRPF40B-206ENST00000547764 TCEAL9Q9UHQ7 104 aa21.19■□□□□ 0.98
PRPF40B-206ENST00000547764 SOX1O00570 391 aaPredicted RBP21.18■□□□□ 0.98
PRPF40B-206ENST00000547764 CCNT1O60563 726 aaKnown RBP21.18■□□□□ 0.98
PRPF40B-206ENST00000547764 PSMD10O75832 226 aa21.18■□□□□ 0.98
PRPF40B-206ENST00000547764 CKBP12277 381 aa21.18■□□□□ 0.98
PRPF40B-206ENST00000547764 GCFC2P16383 781 aaKnown RBP21.18■□□□□ 0.98
PRPF40B-206ENST00000547764 PLCB4Q15147 1175 aa21.18■□□□□ 0.98
PRPF40B-206ENST00000547764 SAFBQ15424 915 aaKnown RBP eCLIP21.18■□□□□ 0.98
PRPF40B-206ENST00000547764 FAM160B1Q5W0V3 765 aa21.18■□□□□ 0.98
PRPF40B-206ENST00000547764 SWSAP1Q6NVH7 229 aa21.18■□□□□ 0.98
PRPF40B-206ENST00000547764 ZNF365Q70YC5 407 aa21.18■□□□□ 0.98
PRPF40B-206ENST00000547764 FBXO18Q8NFZ0 1043 aa21.18■□□□□ 0.98
PRPF40B-206ENST00000547764 ETNPPLQ8TBG4 499 aa21.18■□□□□ 0.98
PRPF40B-206ENST00000547764 NAP1L4Q99733 375 aaKnown RBP21.18■□□□□ 0.98
PRPF40B-206ENST00000547764 TEKT3Q9BXF9 490 aa21.18■□□□□ 0.98
PRPF40B-206ENST00000547764 ZNF302Q9NR11 478 aa21.18■□□□□ 0.98
PRPF40B-206ENST00000547764 PCDHA10Q9Y5I2 948 aa21.18■□□□□ 0.98
PRPF40B-206ENST00000547764 SELPP16109 830 aa21.17■□□□□ 0.98
PRPF40B-206ENST00000547764 SLC26A2P50443 739 aa21.17■□□□□ 0.98
PRPF40B-206ENST00000547764 GRIK4Q16099 956 aa21.17■□□□□ 0.98
PRPF40B-206ENST00000547764 PSRC1Q6PGN9 363 aaPredicted RBP21.17■□□□□ 0.98
PRPF40B-206ENST00000547764 RPUSD2Q8IZ73 545 aaKnown RBP21.17■□□□□ 0.98
PRPF40B-206ENST00000547764 RNPC3Q96LT9 517 aaKnown RBP21.17■□□□□ 0.98
PRPF40B-206ENST00000547764 UNC45AQ9H3U1 944 aa21.17■□□□□ 0.98
PRPF40B-206ENST00000547764 TRPC6Q9Y210 931 aa21.17■□□□□ 0.98
PRPF40B-206ENST00000547764 SAMM50Q9Y512 469 aa21.17■□□□□ 0.98
PRPF40B-206ENST00000547764 KAT6AQ92794 2004 aa21.17■□□□□ 0.98
PRPF40B-206ENST00000547764 WDR64B1ANS9 1081 aa21.16■□□□□ 0.98
PRPF40B-206ENST00000547764 PSAPP07602 524 aa21.16■□□□□ 0.98
PRPF40B-206ENST00000547764 INSRRP14616 1297 aa21.16■□□□□ 0.98
PRPF40B-206ENST00000547764 RFC2P35250 354 aa21.16■□□□□ 0.98
PRPF40B-206ENST00000547764 ZNF618Q5T7W0 954 aa21.16■□□□□ 0.98
PRPF40B-206ENST00000547764 PDXDC2PQ6P474 469 aa21.16■□□□□ 0.98
PRPF40B-206ENST00000547764 LRRC8DQ7L1W4 858 aa21.16■□□□□ 0.98
PRPF40B-206ENST00000547764 DEFB128Q7Z7B8 93 aa21.16■□□□□ 0.98
PRPF40B-206ENST00000547764 KCNMB3Q9NPA1 279 aa21.16■□□□□ 0.98
PRPF40B-206ENST00000547764 DISC1Q9NRI5 854 aa21.16■□□□□ 0.98
PRPF40B-206ENST00000547764 MAFBQ9Y5Q3 323 aaPredicted RBP21.16■□□□□ 0.98
PRPF40B-206ENST00000547764 POTEB3A0JP26 581 aa21.15■□□□□ 0.98
PRPF40B-206ENST00000547764 CHMP2AO43633 222 aa21.15■□□□□ 0.98
PRPF40B-206ENST00000547764 FGBP02675 491 aa21.15■□□□□ 0.98
PRPF40B-206ENST00000547764 ATP4AP20648 1035 aa21.15■□□□□ 0.98
PRPF40B-206ENST00000547764 THPOP40225 353 aa21.15■□□□□ 0.98
PRPF40B-206ENST00000547764 IGBP1P78318 339 aa21.15■□□□□ 0.98
PRPF40B-206ENST00000547764 GPNMBQ14956 572 aa21.15■□□□□ 0.98
PRPF40B-206ENST00000547764 MARCH8Q5T0T0 291 aa21.15■□□□□ 0.98
PRPF40B-206ENST00000547764 TRAF7Q6Q0C0 670 aa21.15■□□□□ 0.98
PRPF40B-206ENST00000547764 POTEBQ6S5H4 581 aa21.15■□□□□ 0.98
PRPF40B-206ENST00000547764 B3GNT9Q6UX72 402 aa21.15■□□□□ 0.98
PRPF40B-206ENST00000547764 TNPO1Q92973 898 aaKnown RBP21.15■□□□□ 0.98
PRPF40B-206ENST00000547764 LRCH3Q96II8 777 aa21.15■□□□□ 0.98
PRPF40B-206ENST00000547764 SCN5AQ14524 2016 aa21.15■□□□□ 0.98
PRPF40B-206ENST00000547764 MBLAC1A4D2B0 266 aaPredicted RBP21.14■□□□□ 0.97
PRPF40B-206ENST00000547764 RRN3P2A6NIE6 340 aa21.14■□□□□ 0.97
PRPF40B-206ENST00000547764 PFKMP08237 780 aa21.14■□□□□ 0.97
PRPF40B-206ENST00000547764 SFNP31947 248 aa21.14■□□□□ 0.97
PRPF40B-206ENST00000547764 RUFY4Q6ZNE9 571 aa21.14■□□□□ 0.97
PRPF40B-206ENST00000547764 POTEDQ86YR6 584 aa21.14■□□□□ 0.97
PRPF40B-206ENST00000547764 ATP8B4Q8TF62 1192 aa21.14■□□□□ 0.97
PRPF40B-206ENST00000547764 HERVK_113Q902F9 699 aa21.14■□□□□ 0.97
PRPF40B-206ENST00000547764 FAM20AQ96MK3 541 aa21.14■□□□□ 0.97
PRPF40B-206ENST00000547764 FOXP1Q9H334 677 aaPredicted RBP21.14■□□□□ 0.97
PRPF40B-206ENST00000547764 GABBR1Q9UBS5 961 aa21.14■□□□□ 0.97
PRPF40B-206ENST00000547764 TUBE1Q9UJT0 475 aa21.14■□□□□ 0.97
PRPF40B-206ENST00000547764 TANC1Q9C0D5 1861 aa21.13■□□□□ 0.97
PRPF40B-206ENST00000547764 WNT7AO00755 349 aa21.13■□□□□ 0.97
PRPF40B-206ENST00000547764 TBX3O15119 743 aa21.13■□□□□ 0.97
PRPF40B-206ENST00000547764 HBP1O60381 514 aa21.13■□□□□ 0.97
PRPF40B-206ENST00000547764 JAK3P52333 1124 aa21.13■□□□□ 0.97
PRPF40B-206ENST00000547764 RASIP1Q5U651 963 aa21.13■□□□□ 0.97
PRPF40B-206ENST00000547764 OTOP2Q7RTS6 562 aa21.13■□□□□ 0.97
PRPF40B-206ENST00000547764 MIER3Q7Z3K6 550 aa21.13■□□□□ 0.97
PRPF40B-206ENST00000547764 TRAPPC12Q8WVT3 735 aa21.13■□□□□ 0.97
PRPF40B-206ENST00000547764 HAS1Q92839 578 aa21.13■□□□□ 0.97
PRPF40B-206ENST00000547764 ZBTB10Q96DT7 871 aa21.13■□□□□ 0.97
PRPF40B-206ENST00000547764 KIF3AQ9Y496 699 aa21.13■□□□□ 0.97
PRPF40B-206ENST00000547764 NBNO60934 754 aa21.12■□□□□ 0.97
PRPF40B-206ENST00000547764 PARNO95453 639 aaKnown RBP21.12■□□□□ 0.97
PRPF40B-206ENST00000547764 GJB2P29033 226 aa21.12■□□□□ 0.97
PRPF40B-206ENST00000547764 TAF2Q6P1X5 1199 aa21.12■□□□□ 0.97
PRPF40B-206ENST00000547764 CKAP2LQ8IYA6 745 aa21.12■□□□□ 0.97
PRPF40B-206ENST00000547764 RDM1Q8NG50 284 aa21.12■□□□□ 0.97
PRPF40B-206ENST00000547764 FTOQ9C0B1 505 aaKnown RBP eCLIP21.12■□□□□ 0.97
PRPF40B-206ENST00000547764 CXXC1Q9P0U4 656 aaPredicted RBP21.12■□□□□ 0.97
PRPF40B-206ENST00000547764 VAV3Q9UKW4 847 aa21.12■□□□□ 0.97
PRPF40B-206ENST00000547764 LAMA2P24043 3122 aaKnown RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms