RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 SLC5A4Q9NY91 659 aa11.69□□□□□ -0.54
NPAS3-205ENST00000547068 PNMA2Q9UL42 364 aa11.69□□□□□ -0.54
NPAS3-205ENST00000547068 ADAMTS3O15072 1205 aa11.69□□□□□ -0.54
NPAS3-205ENST00000547068 MMEP08473 750 aa11.69□□□□□ -0.54
NPAS3-205ENST00000547068 ALADP13716 330 aa11.69□□□□□ -0.54
NPAS3-205ENST00000547068 CHN1P15882 459 aa11.69□□□□□ -0.54
NPAS3-205ENST00000547068 PECAM1P16284 738 aaPredicted RBP11.69□□□□□ -0.54
NPAS3-205ENST00000547068 CCND1P24385 295 aa11.69□□□□□ -0.54
NPAS3-205ENST00000547068 ASIC1P78348 528 aa11.69□□□□□ -0.54
NPAS3-205ENST00000547068 TMC3Q7Z5M5 1100 aa11.69□□□□□ -0.54
NPAS3-205ENST00000547068 CNBD1Q8NA66 436 aa11.69□□□□□ -0.54
NPAS3-205ENST00000547068 SPATA5Q8NB90 893 aa11.69□□□□□ -0.54
NPAS3-205ENST00000547068 CALR3Q96L12 384 aaKnown RBP11.69□□□□□ -0.54
NPAS3-205ENST00000547068 PLA2G12BQ9BX93 195 aa11.69□□□□□ -0.54
NPAS3-205ENST00000547068 CPSF2Q9P2I0 782 aaKnown RBP11.69□□□□□ -0.54
NPAS3-205ENST00000547068 BAZ2BQ9UIF8 2168 aaKnown RBP11.69□□□□□ -0.54
NPAS3-205ENST00000547068 F8VZ95 297 aa11.68□□□□□ -0.54
NPAS3-205ENST00000547068 LIN7AO14910 233 aaPredicted RBP11.68□□□□□ -0.54
NPAS3-205ENST00000547068 DAPK3O43293 454 aa11.68□□□□□ -0.54
NPAS3-205ENST00000547068 CEP104O60308 925 aa11.68□□□□□ -0.54
NPAS3-205ENST00000547068 NQO1P15559 274 aaKnown RBP11.68□□□□□ -0.54
NPAS3-205ENST00000547068 ITGA6P23229 1130 aa11.68□□□□□ -0.54
NPAS3-205ENST00000547068 KCNJ2P63252 427 aa11.68□□□□□ -0.54
NPAS3-205ENST00000547068 DHX9Q08211 1270 aaKnown RBP11.68□□□□□ -0.54
NPAS3-205ENST00000547068 R3HDM1Q15032 1099 aaKnown RBP11.68□□□□□ -0.54
NPAS3-205ENST00000547068 RPS6KA1Q15418 735 aa11.68□□□□□ -0.54
NPAS3-205ENST00000547068 KIAA0753Q2KHM9 967 aa11.68□□□□□ -0.54
NPAS3-205ENST00000547068 ERFEQ4G0M1 354 aa11.68□□□□□ -0.54
NPAS3-205ENST00000547068 THEMIS2Q5TEJ8 643 aa11.68□□□□□ -0.54
NPAS3-205ENST00000547068 CHADLQ6NUI6 762 aa11.68□□□□□ -0.54
NPAS3-205ENST00000547068 TMTC3Q6ZXV5 915 aa11.68□□□□□ -0.54
NPAS3-205ENST00000547068 SCFD2Q8WU76 684 aa11.68□□□□□ -0.54
NPAS3-205ENST00000547068 TLCD1Q96CP7 247 aa11.68□□□□□ -0.54
NPAS3-205ENST00000547068 ELAC2Q9BQ52 826 aaKnown RBP11.68□□□□□ -0.54
NPAS3-205ENST00000547068 AP1M1Q9BXS5 423 aa11.68□□□□□ -0.54
NPAS3-205ENST00000547068 SEMA6BQ9H3T3 888 aa11.68□□□□□ -0.54
NPAS3-205ENST00000547068 KCNMB3Q9NPA1 279 aa11.68□□□□□ -0.54
NPAS3-205ENST00000547068 NLRC4Q9NPP4 1024 aa11.68□□□□□ -0.54
NPAS3-205ENST00000547068 AGAP1Q9UPQ3 857 aa11.68□□□□□ -0.54
NPAS3-205ENST00000547068 CNTNAP5Q8WYK1 1306 aa11.68□□□□□ -0.54
NPAS3-205ENST00000547068 PDE8BO95263 885 aa11.68□□□□□ -0.54
NPAS3-205ENST00000547068 CALM1P0DP23 149 aa11.68□□□□□ -0.54
NPAS3-205ENST00000547068 CALM2P0DP24 149 aa11.68□□□□□ -0.54
NPAS3-205ENST00000547068 CALM3P0DP25 149 aa11.68□□□□□ -0.54
NPAS3-205ENST00000547068 SCG2P13521 617 aa11.68□□□□□ -0.54
NPAS3-205ENST00000547068 TROAPQ12815 778 aa11.68□□□□□ -0.54
NPAS3-205ENST00000547068 BLMHQ13867 455 aa11.68□□□□□ -0.54
NPAS3-205ENST00000547068 GRIPAP1Q4V328 841 aa11.68□□□□□ -0.54
NPAS3-205ENST00000547068 SFMBT2Q5VUG0 894 aa11.68□□□□□ -0.54
NPAS3-205ENST00000547068 LRRC15Q8TF66 581 aa11.68□□□□□ -0.54
NPAS3-205ENST00000547068 NLRP3Q96P20 1036 aa11.68□□□□□ -0.54
NPAS3-205ENST00000547068 SELENOSQ9BQE4 189 aa11.68□□□□□ -0.54
NPAS3-205ENST00000547068 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.68□□□□□ -0.54
NPAS3-205ENST00000547068 TRIM9Q9C026 710 aa11.68□□□□□ -0.54
NPAS3-205ENST00000547068 CCSER1Q9C0I3 900 aa11.68□□□□□ -0.54
NPAS3-205ENST00000547068 DDX47Q9H0S4 455 aaKnown RBP11.68□□□□□ -0.54
NPAS3-205ENST00000547068 LRRC4CQ9HCJ2 640 aa11.68□□□□□ -0.54
NPAS3-205ENST00000547068 CES2O00748 559 aa11.67□□□□□ -0.54
NPAS3-205ENST00000547068 SERPING1P05155 500 aa11.67□□□□□ -0.54
NPAS3-205ENST00000547068 MMP10P09238 476 aa11.67□□□□□ -0.54
NPAS3-205ENST00000547068 ALDH5A1P51649 535 aaPredicted RBP11.67□□□□□ -0.54
NPAS3-205ENST00000547068 EIF3BP55884 814 aaKnown RBP11.67□□□□□ -0.54
NPAS3-205ENST00000547068 KCTD19Q17RG1 926 aaPredicted RBP11.67□□□□□ -0.54
NPAS3-205ENST00000547068 SLC10A5Q5PT55 438 aa11.67□□□□□ -0.54
NPAS3-205ENST00000547068 CNNM4Q6P4Q7 775 aa11.67□□□□□ -0.54
NPAS3-205ENST00000547068 LRRC34Q8IZ02 419 aa11.67□□□□□ -0.54
NPAS3-205ENST00000547068 SRBD1Q8N5C6 995 aaKnown RBP11.67□□□□□ -0.54
NPAS3-205ENST00000547068 VGLL2Q8N8G2 317 aa11.67□□□□□ -0.54
NPAS3-205ENST00000547068 MIGA1Q8NAN2 632 aa11.67□□□□□ -0.54
NPAS3-205ENST00000547068 TBC1D5Q92609 795 aa11.67□□□□□ -0.54
NPAS3-205ENST00000547068 CNKSR1Q969H4 720 aa11.67□□□□□ -0.54
NPAS3-205ENST00000547068 EDEM3Q9BZQ6 932 aa11.67□□□□□ -0.54
NPAS3-205ENST00000547068 GOLGA6L10A0A0M3HER8 536 aa11.67□□□□□ -0.54
NPAS3-205ENST00000547068 POLRMTO00411 1230 aaKnown RBP11.67□□□□□ -0.54
NPAS3-205ENST00000547068 CAND2O75155 1236 aa11.67□□□□□ -0.54
NPAS3-205ENST00000547068 LUC7L3O95232 432 aaKnown RBP11.67□□□□□ -0.54
NPAS3-205ENST00000547068 PLCG1P19174 1290 aa11.67□□□□□ -0.54
NPAS3-205ENST00000547068 CENPPQ6IPU0 288 aa11.67□□□□□ -0.54
NPAS3-205ENST00000547068 HOOK3Q86VS8 718 aa11.67□□□□□ -0.54
NPAS3-205ENST00000547068 ANKS1AQ92625 1134 aa11.67□□□□□ -0.54
NPAS3-205ENST00000547068 PRCCQ92733 491 aaPredicted RBP11.67□□□□□ -0.54
NPAS3-205ENST00000547068 HPS3Q969F9 1004 aa11.67□□□□□ -0.54
NPAS3-205ENST00000547068 PBKQ96KB5 322 aa11.67□□□□□ -0.54
NPAS3-205ENST00000547068 TANGO6Q9C0B7 1094 aa11.67□□□□□ -0.54
NPAS3-205ENST00000547068 CUEDC2Q9H467 287 aa11.67□□□□□ -0.54
NPAS3-205ENST00000547068 GREM2Q9H772 168 aa11.67□□□□□ -0.54
NPAS3-205ENST00000547068 ABCF3Q9NUQ8 709 aa11.67□□□□□ -0.54
NPAS3-205ENST00000547068 BHMG1C9JSJ3 638 aaPredicted RBP11.66□□□□□ -0.54
NPAS3-205ENST00000547068 KIF4AO95239 1232 aa11.66□□□□□ -0.54
NPAS3-205ENST00000547068 VIMP08670 466 aaKnown RBP11.66□□□□□ -0.54
NPAS3-205ENST00000547068 LINGO3P0C6S8 592 aa11.66□□□□□ -0.54
NPAS3-205ENST00000547068 CTSWP56202 376 aa11.66□□□□□ -0.54
NPAS3-205ENST00000547068 SLC18A3Q16572 532 aa11.66□□□□□ -0.54
NPAS3-205ENST00000547068 IFI16Q16666 785 aaKnown RBP11.66□□□□□ -0.54
NPAS3-205ENST00000547068 FAM43BQ6ZT52 329 aaPredicted RBP11.66□□□□□ -0.54
NPAS3-205ENST00000547068 ERICH1Q86X53 443 aa11.66□□□□□ -0.54
NPAS3-205ENST00000547068 SPICE1Q8N0Z3 855 aa11.66□□□□□ -0.54
NPAS3-205ENST00000547068 KIAA0895Q8NCT3 520 aa11.66□□□□□ -0.54
NPAS3-205ENST00000547068 ACTRT1Q8TDG2 376 aa11.66□□□□□ -0.54
NPAS3-205ENST00000547068 PACSIN1Q9BY11 444 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms