RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 VCAM1P19320 739 aa20.59■□□□□ 0.89
VDR-204ENST00000547065 CASP5P51878 434 aa20.59■□□□□ 0.89
VDR-204ENST00000547065 R3HDM1Q15032 1099 aaKnown RBP20.59■□□□□ 0.89
VDR-204ENST00000547065 ELF2Q15723 593 aa20.59■□□□□ 0.89
VDR-204ENST00000547065 C1orf186Q6ZWK4 172 aa20.59■□□□□ 0.89
VDR-204ENST00000547065 NEK9Q8TD19 979 aa20.59■□□□□ 0.89
VDR-204ENST00000547065 AS3MTQ9HBK9 375 aa20.59■□□□□ 0.89
VDR-204ENST00000547065 OLFML3Q9NRN5 406 aa20.59■□□□□ 0.89
VDR-204ENST00000547065 FAM207AQ9NSI2 230 aaPredicted RBP20.59■□□□□ 0.89
VDR-204ENST00000547065 CTAGE9A4FU28 777 aa20.59■□□□□ 0.89
VDR-204ENST00000547065 EFCAB8A8MWE9 144 aa20.59■□□□□ 0.89
VDR-204ENST00000547065 IPO7O95373 1038 aaKnown RBP20.59■□□□□ 0.89
VDR-204ENST00000547065 ITGB5P18084 799 aa20.59■□□□□ 0.89
VDR-204ENST00000547065 MTMR2Q13614 643 aa20.59■□□□□ 0.89
VDR-204ENST00000547065 ERCC6LQ2NKX8 1250 aa20.59■□□□□ 0.89
VDR-204ENST00000547065 SLC30A10Q6XR72 485 aa20.59■□□□□ 0.89
VDR-204ENST00000547065 APOBEC3FQ8IUX4 373 aaKnown RBP20.59■□□□□ 0.89
VDR-204ENST00000547065 SCYL3Q8IZE3 742 aa20.59■□□□□ 0.89
VDR-204ENST00000547065 LRRN4CLQ8ND94 238 aa20.59■□□□□ 0.89
VDR-204ENST00000547065 UBXN4Q92575 508 aa20.59■□□□□ 0.89
VDR-204ENST00000547065 RPAP3Q9H6T3 665 aaPredicted RBP20.59■□□□□ 0.89
VDR-204ENST00000547065 KCND2Q9NZV8 630 aa20.59■□□□□ 0.89
VDR-204ENST00000547065 COL20A1Q9P218 1284 aa20.59■□□□□ 0.89
VDR-204ENST00000547065 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.59■□□□□ 0.89
VDR-204ENST00000547065 RSPH10B2B2RC85 870 aa20.58■□□□□ 0.89
VDR-204ENST00000547065 TADA3O75528 432 aa20.58■□□□□ 0.89
VDR-204ENST00000547065 FAM13AO94988 1023 aa20.58■□□□□ 0.89
VDR-204ENST00000547065 RSPH10BP0C881 870 aa20.58■□□□□ 0.89
VDR-204ENST00000547065 HOXD13P35453 343 aa20.58■□□□□ 0.89
VDR-204ENST00000547065 SPP2Q13103 211 aa20.58■□□□□ 0.89
VDR-204ENST00000547065 PCNX4Q63HM2 1172 aa20.58■□□□□ 0.89
VDR-204ENST00000547065 FRMD5Q7Z6J6 570 aa20.58■□□□□ 0.89
VDR-204ENST00000547065 SLC35F6Q8N357 371 aa20.58■□□□□ 0.89
VDR-204ENST00000547065 SYTL5Q8TDW5 730 aaPredicted RBP20.58■□□□□ 0.89
VDR-204ENST00000547065 ZFP91Q96JP5 570 aaPredicted RBP20.58■□□□□ 0.89
VDR-204ENST00000547065 UBIAD1Q9Y5Z9 338 aa20.58■□□□□ 0.89
VDR-204ENST00000547065 ATAD5Q96QE3 1844 aa20.58■□□□□ 0.88
VDR-204ENST00000547065 MYBP10242 640 aa20.57■□□□□ 0.88
VDR-204ENST00000547065 NR2F2P24468 414 aa20.57■□□□□ 0.88
VDR-204ENST00000547065 BACE1P56817 501 aa20.57■□□□□ 0.88
VDR-204ENST00000547065 HERVK_113P62684 666 aa20.57■□□□□ 0.88
VDR-204ENST00000547065 PPP2R3AQ06190 1150 aa20.57■□□□□ 0.88
VDR-204ENST00000547065 KCNMA1Q12791 1236 aa20.57■□□□□ 0.88
VDR-204ENST00000547065 CCDC42Q96M95 316 aa20.57■□□□□ 0.88
VDR-204ENST00000547065 NUCKS1Q9H1E3 243 aaKnown RBP20.57■□□□□ 0.88
VDR-204ENST00000547065 PICK1Q9NRD5 415 aa20.57■□□□□ 0.88
VDR-204ENST00000547065 KCNH7Q9NS40 1196 aa20.57■□□□□ 0.88
VDR-204ENST00000547065 TYW1Q9NV66 732 aaKnown RBP20.57■□□□□ 0.88
VDR-204ENST00000547065 SEL1LQ9UBV2 794 aa20.57■□□□□ 0.88
VDR-204ENST00000547065 EPHB6O15197 1021 aa20.57■□□□□ 0.88
VDR-204ENST00000547065 EIF3DO15371 548 aaKnown RBP eCLIP20.57■□□□□ 0.88
VDR-204ENST00000547065 PRPF6O94906 941 aaKnown RBP20.57■□□□□ 0.88
VDR-204ENST00000547065 ABL1P00519 1130 aa20.57■□□□□ 0.88
VDR-204ENST00000547065 RPL13P26373 211 aaKnown RBP20.57■□□□□ 0.88
VDR-204ENST00000547065 TKFCQ3LXA3 575 aa20.57■□□□□ 0.88
VDR-204ENST00000547065 MUM1L1Q5H9M0 696 aa20.57■□□□□ 0.88
VDR-204ENST00000547065 NAPGQ99747 312 aaPredicted RBP20.57■□□□□ 0.88
VDR-204ENST00000547065 CCDC94Q9BW85 323 aaPredicted RBP20.57■□□□□ 0.88
VDR-204ENST00000547065 JADE2Q9NQC1 790 aa20.57■□□□□ 0.88
VDR-204ENST00000547065 FRMPD4Q14CM0 1322 aa20.56■□□□□ 0.88
VDR-204ENST00000547065 GCNT3O95395 438 aa20.56■□□□□ 0.88
VDR-204ENST00000547065 DGKZQ13574 1117 aa20.56■□□□□ 0.88
VDR-204ENST00000547065 RRAGAQ7L523 313 aa20.56■□□□□ 0.88
VDR-204ENST00000547065 KIAA1328Q86T90 577 aa20.56■□□□□ 0.88
VDR-204ENST00000547065 MYCT1Q8N699 235 aa20.56■□□□□ 0.88
VDR-204ENST00000547065 ZNF280CQ8ND82 737 aa20.56■□□□□ 0.88
VDR-204ENST00000547065 SMCR8Q8TEV9 937 aaPredicted RBP20.56■□□□□ 0.88
VDR-204ENST00000547065 BAP1Q92560 729 aa20.56■□□□□ 0.88
VDR-204ENST00000547065 PARVGQ9HBI0 331 aa20.56■□□□□ 0.88
VDR-204ENST00000547065 AGO4Q9HCK5 861 aaKnown RBP20.56■□□□□ 0.88
VDR-204ENST00000547065 CDC23Q9UJX2 597 aa20.56■□□□□ 0.88
VDR-204ENST00000547065 ZNF541Q9H0D2 1346 aa20.56■□□□□ 0.88
VDR-204ENST00000547065 VWA5AO00534 786 aa20.55■□□□□ 0.88
VDR-204ENST00000547065 PTPRAP18433 802 aa20.55■□□□□ 0.88
VDR-204ENST00000547065 ANGEL2Q5VTE6 544 aaKnown RBP20.55■□□□□ 0.88
VDR-204ENST00000547065 PDXDC1Q6P996 788 aa20.55■□□□□ 0.88
VDR-204ENST00000547065 MIER3Q7Z3K6 550 aa20.55■□□□□ 0.88
VDR-204ENST00000547065 CACNA2D4Q7Z3S7 1137 aa20.55■□□□□ 0.88
VDR-204ENST00000547065 TRERF1Q96PN7 1200 aa20.55■□□□□ 0.88
VDR-204ENST00000547065 CEP72Q9P209 647 aa20.55■□□□□ 0.88
VDR-204ENST00000547065 ODF2LQ9ULJ1 636 aa20.55■□□□□ 0.88
VDR-204ENST00000547065 GUCA1BQ9UMX6 200 aa20.55■□□□□ 0.88
VDR-204ENST00000547065 ZBTB39O15060 712 aa20.54■□□□□ 0.88
VDR-204ENST00000547065 DHX15O43143 795 aaKnown RBP20.54■□□□□ 0.88
VDR-204ENST00000547065 KRT86O43790 486 aa20.54■□□□□ 0.88
VDR-204ENST00000547065 ERCC3P19447 782 aa20.54■□□□□ 0.88
VDR-204ENST00000547065 SPA17Q15506 151 aa20.54■□□□□ 0.88
VDR-204ENST00000547065 CCDC122Q5T0U0 273 aa20.54■□□□□ 0.88
VDR-204ENST00000547065 CCDC155Q8N6L0 562 aa20.54■□□□□ 0.88
VDR-204ENST00000547065 EHBP1Q8NDI1 1231 aa20.54■□□□□ 0.88
VDR-204ENST00000547065 IL31RAQ8NI17 732 aa20.54■□□□□ 0.88
VDR-204ENST00000547065 SYN2Q92777 582 aaPredicted RBP20.54■□□□□ 0.88
VDR-204ENST00000547065 JAKMIP2Q96AA8 810 aa20.54■□□□□ 0.88
VDR-204ENST00000547065 TAAR1Q96RJ0 339 aa20.54■□□□□ 0.88
VDR-204ENST00000547065 WRNIP1Q96S55 665 aa20.54■□□□□ 0.88
VDR-204ENST00000547065 LXNQ9BS40 222 aa20.54■□□□□ 0.88
VDR-204ENST00000547065 METTL14Q9HCE5 456 aaKnown RBP20.54■□□□□ 0.88
VDR-204ENST00000547065 HOMER2Q9NSB8 354 aa20.54■□□□□ 0.88
VDR-204ENST00000547065 TBC1D22BQ9NU19 505 aa20.54■□□□□ 0.88
VDR-204ENST00000547065 ARMCX3Q9UH62 379 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms