RNA–Protein interactions for RNA: ENST00000546417.5

BRF1-207, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-207ENST00000546417 PCDHGC5Q9Y5F6 944 aa13.94□□□□□ -0.18
BRF1-207ENST00000546417 DOCK5Q9H7D0 1870 aa13.93□□□□□ -0.18
BRF1-207ENST00000546417 CLCN5P51795 746 aa13.93□□□□□ -0.18
BRF1-207ENST00000546417 ANKRD54Q6NXT1 300 aa13.93□□□□□ -0.18
BRF1-207ENST00000546417 RUFY4Q6ZNE9 571 aa13.93□□□□□ -0.18
BRF1-207ENST00000546417 CYFIP1Q7L576 1253 aa13.93□□□□□ -0.18
BRF1-207ENST00000546417 IQCA1Q86XH1 822 aa13.93□□□□□ -0.18
BRF1-207ENST00000546417 TRIM50Q86XT4 487 aa13.93□□□□□ -0.18
BRF1-207ENST00000546417 VN1R2Q8NFZ6 395 aa13.93□□□□□ -0.18
BRF1-207ENST00000546417 ZKSCAN3Q9BRR0 538 aa13.93□□□□□ -0.18
BRF1-207ENST00000546417 RNF41Q9H4P4 317 aaPredicted RBP13.93□□□□□ -0.18
BRF1-207ENST00000546417 BCAS3Q9H6U6 928 aa13.93□□□□□ -0.18
BRF1-207ENST00000546417 HELLSQ9NRZ9 838 aa13.93□□□□□ -0.18
BRF1-207ENST00000546417 SUPT16HQ9Y5B9 1047 aaKnown RBP13.93□□□□□ -0.18
BRF1-207ENST00000546417 ZMYM6O95789 1325 aa13.92□□□□□ -0.18
BRF1-207ENST00000546417 STAM2O75886 525 aa13.92□□□□□ -0.18
BRF1-207ENST00000546417 BRD1O95696 1058 aa13.92□□□□□ -0.18
BRF1-207ENST00000546417 RPLP2P05387 115 aaKnown RBP13.92□□□□□ -0.18
BRF1-207ENST00000546417 PARP1P09874 1014 aaKnown RBP13.92□□□□□ -0.18
BRF1-207ENST00000546417 HOXB8P17481 243 aaPredicted RBP13.92□□□□□ -0.18
BRF1-207ENST00000546417 SP100P23497 879 aaPredicted RBP13.92□□□□□ -0.18
BRF1-207ENST00000546417 HOXA13P31271 388 aaPredicted RBP13.92□□□□□ -0.18
BRF1-207ENST00000546417 TECP42680 631 aa13.92□□□□□ -0.18
BRF1-207ENST00000546417 NT5C2P49902 561 aa13.92□□□□□ -0.18
BRF1-207ENST00000546417 HAND2P61296 217 aa13.92□□□□□ -0.18
BRF1-207ENST00000546417 SPOUT1Q5T280 376 aaKnown RBP13.92□□□□□ -0.18
BRF1-207ENST00000546417 UTP14CQ5TAP6 766 aaKnown RBP13.92□□□□□ -0.18
BRF1-207ENST00000546417 RTN4RL1Q86UN2 441 aaPredicted RBP13.92□□□□□ -0.18
BRF1-207ENST00000546417 LINC01599Q8WXQ3 324 aa13.92□□□□□ -0.18
BRF1-207ENST00000546417 ZFP91Q96JP5 570 aaPredicted RBP13.92□□□□□ -0.18
BRF1-207ENST00000546417 MFSD1Q9H3U5 465 aa13.92□□□□□ -0.18
BRF1-207ENST00000546417 TSHZ2Q9NRE2 1034 aa13.92□□□□□ -0.18
BRF1-207ENST00000546417 LRFN2Q9ULH4 789 aa13.92□□□□□ -0.18
BRF1-207ENST00000546417 PCDHA1Q9Y5I3 950 aa13.92□□□□□ -0.18
BRF1-207ENST00000546417 CDY2AQ9Y6F7 541 aa13.92□□□□□ -0.18
BRF1-207ENST00000546417 SQORQ9Y6N5 450 aa13.92□□□□□ -0.18
BRF1-207ENST00000546417 MED19A0JLT2 244 aaPredicted RBP13.91□□□□□ -0.18
BRF1-207ENST00000546417 TRIM6-TRIM34B2RNG4 842 aa13.91□□□□□ -0.18
BRF1-207ENST00000546417 GCOM1H8Y6P7 765 aaPredicted RBP13.91□□□□□ -0.18
BRF1-207ENST00000546417 POLR2MP0CAP2 368 aa13.91□□□□□ -0.18
BRF1-207ENST00000546417 SCG2P13521 617 aa13.91□□□□□ -0.18
BRF1-207ENST00000546417 CD52P31358 61 aa13.91□□□□□ -0.18
BRF1-207ENST00000546417 HNRNPUQ00839 825 aaKnown RBP eCLIP13.91□□□□□ -0.18
BRF1-207ENST00000546417 TRAF1Q13077 416 aa13.91□□□□□ -0.18
BRF1-207ENST00000546417 KCNC3Q14003 757 aa13.91□□□□□ -0.18
BRF1-207ENST00000546417 IER5Q5VY09 327 aa13.91□□□□□ -0.18
BRF1-207ENST00000546417 SYCE2Q6PIF2 218 aa13.91□□□□□ -0.18
BRF1-207ENST00000546417 DGLUCYQ7Z3D6 616 aa13.91□□□□□ -0.18
BRF1-207ENST00000546417 RASGRP4Q8TDF6 673 aa13.91□□□□□ -0.18
BRF1-207ENST00000546417 DNAJB3Q8WWF6 145 aa13.91□□□□□ -0.18
BRF1-207ENST00000546417 AGO3Q9H9G7 860 aaKnown RBP13.91□□□□□ -0.18
BRF1-207ENST00000546417 TUBE1Q9UJT0 475 aa13.91□□□□□ -0.18
BRF1-207ENST00000546417 SPATA31C2B4DYI2 1134 aa13.9□□□□□ -0.18
BRF1-207ENST00000546417 FIBPO43427 364 aa13.9□□□□□ -0.18
BRF1-207ENST00000546417 FGF18O76093 207 aa13.9□□□□□ -0.18
BRF1-207ENST00000546417 ERVFC1P60507 584 aa13.9□□□□□ -0.18
BRF1-207ENST00000546417 MRPS6P82932 125 aaKnown RBP13.9□□□□□ -0.18
BRF1-207ENST00000546417 PPFIA1Q13136 1202 aa13.9□□□□□ -0.18
BRF1-207ENST00000546417 MCMDC2Q4G0Z9 681 aa13.9□□□□□ -0.18
BRF1-207ENST00000546417 CES5AQ6NT32 575 aa13.9□□□□□ -0.18
BRF1-207ENST00000546417 FCHSD1Q86WN1 690 aa13.9□□□□□ -0.18
BRF1-207ENST00000546417 EVI5LQ96CN4 794 aa13.9□□□□□ -0.18
BRF1-207ENST00000546417 NECTIN4Q96NY8 510 aa13.9□□□□□ -0.18
BRF1-207ENST00000546417 INPP4AQ96PE3 977 aaPredicted RBP13.9□□□□□ -0.18
BRF1-207ENST00000546417 APOL5Q9BWW9 433 aa13.9□□□□□ -0.18
BRF1-207ENST00000546417 RNF216Q9NWF9 866 aaPredicted RBP13.9□□□□□ -0.18
BRF1-207ENST00000546417 TMEM260Q9NX78 707 aa13.9□□□□□ -0.18
BRF1-207ENST00000546417 EP300Q09472 2414 aaPredicted RBP13.9□□□□□ -0.18
BRF1-207ENST00000546417 LOXHD1Q8IVV2 1947 aa13.9□□□□□ -0.18
BRF1-207ENST00000546417 DMDP11532 3685 aa13.89□□□□□ -0.19
BRF1-207ENST00000546417 DMXL1Q9Y485 3027 aa13.89□□□□□ -0.19
BRF1-207ENST00000546417 MBLAC1A4D2B0 266 aaPredicted RBP13.89□□□□□ -0.19
BRF1-207ENST00000546417 M0QZ92 97 aa13.89□□□□□ -0.19
BRF1-207ENST00000546417 ZBTB5O15062 677 aa13.89□□□□□ -0.19
BRF1-207ENST00000546417 MX1P20591 662 aa13.89□□□□□ -0.19
BRF1-207ENST00000546417 MRPS9P82933 396 aaKnown RBP13.89□□□□□ -0.19
BRF1-207ENST00000546417 GRIK4Q16099 956 aa13.89□□□□□ -0.19
BRF1-207ENST00000546417 TPRNQ4KMQ1 711 aa13.89□□□□□ -0.19
BRF1-207ENST00000546417 FAM43BQ6ZT52 329 aaPredicted RBP13.89□□□□□ -0.19
BRF1-207ENST00000546417 TBC1D10CQ8IV04 446 aa13.89□□□□□ -0.19
BRF1-207ENST00000546417 THNSL1Q8IYQ7 743 aa13.89□□□□□ -0.19
BRF1-207ENST00000546417 RMDN1Q96DB5 314 aa13.89□□□□□ -0.19
BRF1-207ENST00000546417 SENP7Q9BQF6 1050 aa13.89□□□□□ -0.19
BRF1-207ENST00000546417 SEMA4AQ9H3S1 761 aa13.89□□□□□ -0.19
BRF1-207ENST00000546417 PADI3Q9ULW8 664 aa13.89□□□□□ -0.19
BRF1-207ENST00000546417 PCDHB7Q9Y5E2 793 aa13.89□□□□□ -0.19
BRF1-207ENST00000546417 FNDC1Q4ZHG4 1894 aaPredicted RBP13.89□□□□□ -0.19
BRF1-207ENST00000546417 C2CD4DB7Z1M9 353 aa13.88□□□□□ -0.19
BRF1-207ENST00000546417 FSCN2O14926 492 aa13.88□□□□□ -0.19
BRF1-207ENST00000546417 PPP1R11O60927 126 aaPredicted RBP13.88□□□□□ -0.19
BRF1-207ENST00000546417 GATMP50440 423 aa13.88□□□□□ -0.19
BRF1-207ENST00000546417 SP4Q02446 784 aa13.88□□□□□ -0.19
BRF1-207ENST00000546417 SEMA3FQ13275 785 aa13.88□□□□□ -0.19
BRF1-207ENST00000546417 LLGL2Q6P1M3 1020 aa13.88□□□□□ -0.19
BRF1-207ENST00000546417 GIMAP8Q8ND71 665 aaPredicted RBP13.88□□□□□ -0.19
BRF1-207ENST00000546417 MTMR8Q96EF0 704 aa13.88□□□□□ -0.19
BRF1-207ENST00000546417 ZSCAN10Q96SZ4 725 aaPredicted RBP13.88□□□□□ -0.19
BRF1-207ENST00000546417 ERAP1Q9NZ08 941 aa13.88□□□□□ -0.19
BRF1-207ENST00000546417 RTEL1Q9NZ71 1219 aa13.88□□□□□ -0.19
BRF1-207ENST00000546417 PUF60Q9UHX1 559 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms