RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 RFC5P40937 340 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 NLRP5P59047 1200 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 KCNJ2P63252 427 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 SPAG1Q07617 926 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 TRIM14Q14142 442 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 SF3B3Q15393 1217 aaKnown RBP8.6□□□□□ -1.03
UBR1-202ENST00000546274 FBXO33Q7Z6M2 555 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 MARCH10Q8NA82 808 aaPredicted RBP8.6□□□□□ -1.03
UBR1-202ENST00000546274 CCT6BQ92526 530 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 CELF1Q92879 486 aaKnown RBP8.6□□□□□ -1.03
UBR1-202ENST00000546274 RPS6KC1Q96S38 1066 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 DISC1Q9NRI5 854 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 IL17RBQ9NRM6 502 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 SMARCAL1Q9NZC9 954 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 DLGAP2Q9P1A6 1054 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 BZW2Q9Y6E2 419 aaKnown RBP8.6□□□□□ -1.03
UBR1-202ENST00000546274 ESYT3A0FGR9 886 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 NDUFA10O95299 355 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 DESP17661 470 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 STAT6P42226 847 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 GJA8P48165 433 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 EPHB4P54760 987 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 HERVK_113P62684 666 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 SFSWAPQ12872 951 aaKnown RBP8.6□□□□□ -1.03
UBR1-202ENST00000546274 CCDC122Q5T0U0 273 aa8.6□□□□□ -1.03
UBR1-202ENST00000546274 GPKOWQ92917 476 aaPredicted RBP eCLIP8.6□□□□□ -1.03
UBR1-202ENST00000546274 PDS5AQ29RF7 1337 aaKnown RBP8.59□□□□□ -1.03
UBR1-202ENST00000546274 PPIP5K2O43314 1243 aa8.59□□□□□ -1.03
UBR1-202ENST00000546274 TRIM37O94972 964 aa8.59□□□□□ -1.03
UBR1-202ENST00000546274 ATP2A2P16615 1042 aaKnown RBP8.59□□□□□ -1.03
UBR1-202ENST00000546274 CYP11B2P19099 503 aa8.59□□□□□ -1.03
UBR1-202ENST00000546274 UBXN1Q04323 297 aa8.59□□□□□ -1.03
UBR1-202ENST00000546274 CAVIN4Q5BKX8 364 aa8.59□□□□□ -1.03
UBR1-202ENST00000546274 TCERG1LQ5VWI1 586 aa8.59□□□□□ -1.03
UBR1-202ENST00000546274 ANO7Q6IWH7 933 aa8.59□□□□□ -1.03
UBR1-202ENST00000546274 KIF2BQ8N4N8 673 aa8.59□□□□□ -1.03
UBR1-202ENST00000546274 MB21D1Q8N884 522 aa8.59□□□□□ -1.03
UBR1-202ENST00000546274 RASGRP4Q8TDF6 673 aa8.59□□□□□ -1.03
UBR1-202ENST00000546274 CNKSR1Q969H4 720 aa8.59□□□□□ -1.03
UBR1-202ENST00000546274 FGD4Q96M96 766 aa8.59□□□□□ -1.03
UBR1-202ENST00000546274 PYM1Q9BRP8 204 aaKnown RBP8.59□□□□□ -1.03
UBR1-202ENST00000546274 TTYH3Q9C0H2 523 aa8.59□□□□□ -1.03
UBR1-202ENST00000546274 TMEM60Q9H2L4 133 aa8.59□□□□□ -1.03
UBR1-202ENST00000546274 NDST4Q9H3R1 872 aa8.59□□□□□ -1.03
UBR1-202ENST00000546274 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.59□□□□□ -1.03
UBR1-202ENST00000546274 TNRC6CQ9HCJ0 1690 aaKnown RBP8.59□□□□□ -1.03
UBR1-202ENST00000546274 LGALS16A8MUM7 142 aa8.59□□□□□ -1.03
UBR1-202ENST00000546274 PSMD14O00487 310 aa8.59□□□□□ -1.03
UBR1-202ENST00000546274 PRDX5P30044 214 aa8.59□□□□□ -1.03
UBR1-202ENST00000546274 KBTBD12Q3ZCT8 623 aa8.59□□□□□ -1.03
UBR1-202ENST00000546274 SBK1Q52WX2 424 aa8.59□□□□□ -1.03
UBR1-202ENST00000546274 LACTB2Q53H82 288 aaPredicted RBP8.59□□□□□ -1.03
UBR1-202ENST00000546274 LMNTD2Q8IXW0 634 aa8.59□□□□□ -1.03
UBR1-202ENST00000546274 BLIDQ8IZY5 108 aa8.59□□□□□ -1.03
UBR1-202ENST00000546274 STAG2Q8N3U4 1231 aa8.59□□□□□ -1.03
UBR1-202ENST00000546274 C17orf50Q8WW18 174 aa8.59□□□□□ -1.03
UBR1-202ENST00000546274 OPTNQ96CV9 577 aa8.59□□□□□ -1.03
UBR1-202ENST00000546274 ATP6V1G3Q96LB4 118 aa8.59□□□□□ -1.03
UBR1-202ENST00000546274 NDNQ99608 321 aa8.59□□□□□ -1.03
UBR1-202ENST00000546274 TRIM7Q9C029 511 aa8.59□□□□□ -1.03
UBR1-202ENST00000546274 RMND1Q9NWS8 449 aa8.59□□□□□ -1.03
UBR1-202ENST00000546274 IRS2Q9Y4H2 1338 aa8.59□□□□□ -1.03
UBR1-202ENST00000546274 H7C1D1 291 aa8.59□□□□□ -1.04
UBR1-202ENST00000546274 HGSO14964 777 aaPredicted RBP8.59□□□□□ -1.04
UBR1-202ENST00000546274 FAM153BP0C7A2 387 aa8.59□□□□□ -1.04
UBR1-202ENST00000546274 IDEP14735 1019 aa8.59□□□□□ -1.04
UBR1-202ENST00000546274 DYNC1I2Q13409 638 aaKnown RBP8.59□□□□□ -1.04
UBR1-202ENST00000546274 BYSLQ13895 437 aaKnown RBP8.59□□□□□ -1.04
UBR1-202ENST00000546274 FAM153CQ494X1 144 aa8.59□□□□□ -1.04
UBR1-202ENST00000546274 RNF168Q8IYW5 571 aaPredicted RBP8.59□□□□□ -1.04
UBR1-202ENST00000546274 KBTBD4Q9NVX7 518 aa8.59□□□□□ -1.04
UBR1-202ENST00000546274 SPATA7Q9P0W8 599 aa8.59□□□□□ -1.04
UBR1-202ENST00000546274 FAM153AQ9UHL3 310 aa8.59□□□□□ -1.04
UBR1-202ENST00000546274 NFU1Q9UMS0 254 aa8.59□□□□□ -1.04
UBR1-202ENST00000546274 PCDHA6Q9UN73 950 aa8.59□□□□□ -1.04
UBR1-202ENST00000546274 PCDHA4Q9UN74 947 aa8.59□□□□□ -1.04
UBR1-202ENST00000546274 PCDHA8Q9Y5H6 950 aa8.59□□□□□ -1.04
UBR1-202ENST00000546274 EPN1Q9Y6I3 576 aaPredicted RBP8.59□□□□□ -1.04
UBR1-202ENST00000546274 FLT1P17948 1338 aa8.58□□□□□ -1.04
UBR1-202ENST00000546274 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.58□□□□□ -1.04
UBR1-202ENST00000546274 A0A1W2PQC6 194 aa8.58□□□□□ -1.04
UBR1-202ENST00000546274 CCT8L1PA6NM43 557 aa8.58□□□□□ -1.04
UBR1-202ENST00000546274 PLSCR1O15162 318 aa8.58□□□□□ -1.04
UBR1-202ENST00000546274 NKRFO15226 690 aaKnown RBP eCLIP8.58□□□□□ -1.04
UBR1-202ENST00000546274 ALDH5A1P51649 535 aaPredicted RBP8.58□□□□□ -1.04
UBR1-202ENST00000546274 DEUP1Q05D60 604 aa8.58□□□□□ -1.04
UBR1-202ENST00000546274 TTI2Q6NXR4 508 aa8.58□□□□□ -1.04
UBR1-202ENST00000546274 GIMAP8Q8ND71 665 aaPredicted RBP8.58□□□□□ -1.04
UBR1-202ENST00000546274 SH3GLB2Q9NR46 395 aa8.58□□□□□ -1.04
UBR1-202ENST00000546274 ATP8A2Q9NTI2 1148 aa8.58□□□□□ -1.04
UBR1-202ENST00000546274 ARPP21Q9UBL0 812 aaPredicted RBP8.58□□□□□ -1.04
UBR1-202ENST00000546274 MAD2L2Q9UI95 211 aa8.58□□□□□ -1.04
UBR1-202ENST00000546274 CAPN11Q9UMQ6 739 aa8.58□□□□□ -1.04
UBR1-202ENST00000546274 ZNF510Q9Y2H8 683 aa8.58□□□□□ -1.04
UBR1-202ENST00000546274 USH1CQ9Y6N9 552 aa8.58□□□□□ -1.04
UBR1-202ENST00000546274 BTAF1O14981 1849 aa8.58□□□□□ -1.04
UBR1-202ENST00000546274 MACROD2A1Z1Q3 448 aa8.58□□□□□ -1.04
UBR1-202ENST00000546274 TRAPPC3O43617 180 aa8.58□□□□□ -1.04
UBR1-202ENST00000546274 CYTH3O43739 400 aa8.58□□□□□ -1.04
UBR1-202ENST00000546274 RHOBTB3O94955 611 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms