RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 IRX3P78415 501 aaPredicted RBP20.72■□□□□ 0.91
MSLN-202ENST00000545450 SLC7A5Q01650 507 aa20.72■□□□□ 0.91
MSLN-202ENST00000545450 PDE4DQ08499 809 aa20.72■□□□□ 0.91
MSLN-202ENST00000545450 COBLL1Q53SF7 1204 aa20.72■□□□□ 0.91
MSLN-202ENST00000545450 TTMPQ5BVD1 217 aa20.72■□□□□ 0.91
MSLN-202ENST00000545450 TBCKQ8TEA7 893 aa20.72■□□□□ 0.91
MSLN-202ENST00000545450 C7orf25Q9BPX7 421 aa20.72■□□□□ 0.91
MSLN-202ENST00000545450 FHDC1Q9C0D6 1143 aaPredicted RBP20.72■□□□□ 0.91
MSLN-202ENST00000545450 DEF6Q9H4E7 631 aa20.72■□□□□ 0.91
MSLN-202ENST00000545450 RIC8AQ9NPQ8 531 aa20.72■□□□□ 0.91
MSLN-202ENST00000545450 HACL1Q9UJ83 578 aa20.72■□□□□ 0.91
MSLN-202ENST00000545450 TMX2Q9Y320 296 aa20.72■□□□□ 0.91
MSLN-202ENST00000545450 NKRFO15226 690 aaKnown RBP eCLIP20.71■□□□□ 0.91
MSLN-202ENST00000545450 KIF11P52732 1056 aa20.71■□□□□ 0.91
MSLN-202ENST00000545450 SNAP25P60880 206 aa20.71■□□□□ 0.91
MSLN-202ENST00000545450 TNFAIP1Q13829 316 aa20.71■□□□□ 0.91
MSLN-202ENST00000545450 LETM2Q2VYF4 491 aa20.71■□□□□ 0.91
MSLN-202ENST00000545450 NFRKBQ6P4R8 1299 aa20.71■□□□□ 0.91
MSLN-202ENST00000545450 KAT2BQ92831 832 aa20.71■□□□□ 0.91
MSLN-202ENST00000545450 ARL8AQ96BM9 186 aa20.71■□□□□ 0.91
MSLN-202ENST00000545450 SIK3Q9Y2K2 1263 aa20.71■□□□□ 0.91
MSLN-202ENST00000545450 LIG3P49916 1009 aa20.7■□□□□ 0.91
MSLN-202ENST00000545450 NNTQ13423 1086 aa20.7■□□□□ 0.91
MSLN-202ENST00000545450 UBE2SQ16763 222 aa20.7■□□□□ 0.91
MSLN-202ENST00000545450 ARHGAP27Q6ZUM4 889 aa20.7■□□□□ 0.91
MSLN-202ENST00000545450 NEK8Q86SG6 692 aa20.7■□□□□ 0.91
MSLN-202ENST00000545450 DRC1Q96MC2 740 aa20.7■□□□□ 0.91
MSLN-202ENST00000545450 ALS2CR12Q96Q35 445 aa20.7■□□□□ 0.91
MSLN-202ENST00000545450 PHF20L1A8MW92 1017 aa20.7■□□□□ 0.9
MSLN-202ENST00000545450 HSF2BPO75031 334 aa20.7■□□□□ 0.9
MSLN-202ENST00000545450 PLCG1P19174 1290 aa20.7■□□□□ 0.9
MSLN-202ENST00000545450 EIF4A3P38919 411 aaKnown RBP20.7■□□□□ 0.9
MSLN-202ENST00000545450 CLK2P49760 499 aaKnown RBP20.7■□□□□ 0.9
MSLN-202ENST00000545450 GLE1Q53GS7 698 aaKnown RBP20.7■□□□□ 0.9
MSLN-202ENST00000545450 SWT1Q5T5J6 900 aaKnown RBP20.7■□□□□ 0.9
MSLN-202ENST00000545450 CCDC84Q86UT8 332 aaPredicted RBP20.7■□□□□ 0.9
MSLN-202ENST00000545450 AK8Q96MA6 479 aa20.7■□□□□ 0.9
MSLN-202ENST00000545450 PJA2O43164 708 aa20.69■□□□□ 0.9
MSLN-202ENST00000545450 CCNT1O60563 726 aaKnown RBP20.69■□□□□ 0.9
MSLN-202ENST00000545450 IKQ13123 557 aaPredicted RBP20.69■□□□□ 0.9
MSLN-202ENST00000545450 CCDC181Q5TID7 509 aa20.69■□□□□ 0.9
MSLN-202ENST00000545450 SYDE2Q5VT97 1194 aa20.69■□□□□ 0.9
MSLN-202ENST00000545450 BTNL9Q6UXG8 535 aa20.69■□□□□ 0.9
MSLN-202ENST00000545450 CABP7Q86V35 215 aa20.69■□□□□ 0.9
MSLN-202ENST00000545450 POTEDQ86YR6 584 aa20.69■□□□□ 0.9
MSLN-202ENST00000545450 GLIS2Q9BZE0 524 aaPredicted RBP20.69■□□□□ 0.9
MSLN-202ENST00000545450 EPHB6O15197 1021 aa20.69■□□□□ 0.9
MSLN-202ENST00000545450 EDIL3O43854 480 aa20.69■□□□□ 0.9
MSLN-202ENST00000545450 FCER1AP12319 257 aa20.69■□□□□ 0.9
MSLN-202ENST00000545450 MATR3P43243 847 aaKnown RBP eCLIP20.69■□□□□ 0.9
MSLN-202ENST00000545450 MRPS25P82663 173 aaKnown RBP20.69■□□□□ 0.9
MSLN-202ENST00000545450 VWA3BQ502W6 1294 aa20.69■□□□□ 0.9
MSLN-202ENST00000545450 CCDC155Q8N6L0 562 aa20.69■□□□□ 0.9
MSLN-202ENST00000545450 CUL5Q93034 780 aa20.69■□□□□ 0.9
MSLN-202ENST00000545450 CEP89Q96ST8 783 aa20.69■□□□□ 0.9
MSLN-202ENST00000545450 PCDHA1Q9Y5I3 950 aa20.69■□□□□ 0.9
MSLN-202ENST00000545450 ATXN2Q99700 1313 aaKnown RBP20.69■□□□□ 0.9
MSLN-202ENST00000545450 PAFAH1B1P43034 410 aa20.68■□□□□ 0.9
MSLN-202ENST00000545450 MCTP2Q6DN12 878 aa20.68■□□□□ 0.9
MSLN-202ENST00000545450 CENPPQ6IPU0 288 aa20.68■□□□□ 0.9
MSLN-202ENST00000545450 RUFY1Q96T51 708 aa20.68■□□□□ 0.9
MSLN-202ENST00000545450 SEMA6BQ9H3T3 888 aa20.68■□□□□ 0.9
MSLN-202ENST00000545450 GOPCQ9HD26 462 aa20.68■□□□□ 0.9
MSLN-202ENST00000545450 SMARCAL1Q9NZC9 954 aa20.68■□□□□ 0.9
MSLN-202ENST00000545450 CLSTN1O94985 981 aa20.68■□□□□ 0.9
MSLN-202ENST00000545450 CXCR5P32302 372 aa20.68■□□□□ 0.9
MSLN-202ENST00000545450 ASIC1P78348 528 aa20.68■□□□□ 0.9
MSLN-202ENST00000545450 ZYXQ15942 572 aaKnown RBP20.68■□□□□ 0.9
MSLN-202ENST00000545450 TLR10Q9BXR5 811 aa20.68■□□□□ 0.9
MSLN-202ENST00000545450 NDST4Q9H3R1 872 aa20.68■□□□□ 0.9
MSLN-202ENST00000545450 RABEP2Q9H5N1 569 aa20.68■□□□□ 0.9
MSLN-202ENST00000545450 PSTPIP2Q9H939 334 aa20.68■□□□□ 0.9
MSLN-202ENST00000545450 GEMIN8Q9NWZ8 242 aaKnown RBP20.68■□□□□ 0.9
MSLN-202ENST00000545450 SALL4Q9UJQ4 1053 aa20.68■□□□□ 0.9
MSLN-202ENST00000545450 LMNB1P20700 586 aa20.67■□□□□ 0.9
MSLN-202ENST00000545450 FAM83BQ5T0W9 1011 aa20.67■□□□□ 0.9
MSLN-202ENST00000545450 C8orf74Q6P047 294 aa20.67■□□□□ 0.9
MSLN-202ENST00000545450 KIAA0895Q8NCT3 520 aa20.67■□□□□ 0.9
MSLN-202ENST00000545450 ZIM3Q96PE6 472 aa20.67■□□□□ 0.9
MSLN-202ENST00000545450 DEFB129Q9H1M3 183 aa20.67■□□□□ 0.9
MSLN-202ENST00000545450 EHD2Q9NZN4 543 aa20.67■□□□□ 0.9
MSLN-202ENST00000545450 AKR1B10O60218 316 aa20.66■□□□□ 0.9
MSLN-202ENST00000545450 ASNSP08243 561 aa20.66■□□□□ 0.9
MSLN-202ENST00000545450 TAL1P17542 331 aaPredicted RBP20.66■□□□□ 0.9
MSLN-202ENST00000545450 INPP5BP32019 993 aa20.66■□□□□ 0.9
MSLN-202ENST00000545450 MAGEA1P43355 309 aa20.66■□□□□ 0.9
MSLN-202ENST00000545450 MRPL12P52815 198 aaKnown RBP20.66■□□□□ 0.9
MSLN-202ENST00000545450 ASTE1Q2TB18 679 aaPredicted RBP20.66■□□□□ 0.9
MSLN-202ENST00000545450 EMC10Q5UCC4 262 aa20.66■□□□□ 0.9
MSLN-202ENST00000545450 TTC19Q6DKK2 380 aaPredicted RBP20.66■□□□□ 0.9
MSLN-202ENST00000545450 CNNM4Q6P4Q7 775 aa20.66■□□□□ 0.9
MSLN-202ENST00000545450 B4GALNT4Q76KP1 1039 aa20.66■□□□□ 0.9
MSLN-202ENST00000545450 IQCKQ8N0W5 287 aa20.66■□□□□ 0.9
MSLN-202ENST00000545450 TRPM4Q8TD43 1214 aa20.66■□□□□ 0.9
MSLN-202ENST00000545450 PSMB7Q99436 277 aa20.66■□□□□ 0.9
MSLN-202ENST00000545450 VCPKMTQ9H867 229 aa20.66■□□□□ 0.9
MSLN-202ENST00000545450 FAM207AQ9NSI2 230 aaPredicted RBP20.66■□□□□ 0.9
MSLN-202ENST00000545450 RBM12Q9NTZ6 932 aaKnown RBP20.66■□□□□ 0.9
MSLN-202ENST00000545450 PRR12Q9ULL5 1215 aa20.66■□□□□ 0.9
MSLN-202ENST00000545450 POLR2AP24928 1970 aaKnown RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms