RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 TAF2Q6P1X5 1199 aa17.81■□□□□ 0.44
CCDC78-216ENST00000544996 MOXD1Q6UVY6 613 aa17.81■□□□□ 0.44
CCDC78-216ENST00000544996 ABHD15Q6UXT9 468 aa17.81■□□□□ 0.44
CCDC78-216ENST00000544996 DEFB123Q8N688 67 aa17.81■□□□□ 0.44
CCDC78-216ENST00000544996 RIT2Q99578 217 aa17.81■□□□□ 0.44
CCDC78-216ENST00000544996 LLPHQ9BRT6 129 aaKnown RBP17.81■□□□□ 0.44
CCDC78-216ENST00000544996 GJB4Q9NTQ9 266 aa17.81■□□□□ 0.44
CCDC78-216ENST00000544996 SLC4A7Q9Y6M7 1214 aa17.81■□□□□ 0.44
CCDC78-216ENST00000544996 LAMA3Q16787 3333 aa17.8■□□□□ 0.44
CCDC78-216ENST00000544996 IGKV6D-21A0A0A0MT36 114 aa17.8■□□□□ 0.44
CCDC78-216ENST00000544996 RSPH10B2B2RC85 870 aa17.8■□□□□ 0.44
CCDC78-216ENST00000544996 MSH4O15457 936 aa17.8■□□□□ 0.44
CCDC78-216ENST00000544996 JAK2O60674 1132 aa17.8■□□□□ 0.44
CCDC78-216ENST00000544996 GAS7O60861 476 aa17.8■□□□□ 0.44
CCDC78-216ENST00000544996 RSPH10BP0C881 870 aa17.8■□□□□ 0.44
CCDC78-216ENST00000544996 KRT2P35908 639 aa17.8■□□□□ 0.44
CCDC78-216ENST00000544996 ADAM17P78536 824 aa17.8■□□□□ 0.44
CCDC78-216ENST00000544996 ZNF697Q5TEC3 545 aa17.8■□□□□ 0.44
CCDC78-216ENST00000544996 PIK3AP1Q6ZUJ8 805 aa17.8■□□□□ 0.44
CCDC78-216ENST00000544996 CCDC83Q8IWF9 413 aa17.8■□□□□ 0.44
CCDC78-216ENST00000544996 WNT8BQ93098 351 aa17.8■□□□□ 0.44
CCDC78-216ENST00000544996 ZNF302Q9NR11 478 aa17.8■□□□□ 0.44
CCDC78-216ENST00000544996 CXXC1Q9P0U4 656 aaPredicted RBP17.8■□□□□ 0.44
CCDC78-216ENST00000544996 TUBE1Q9UJT0 475 aa17.8■□□□□ 0.44
CCDC78-216ENST00000544996 SAMM50Q9Y512 469 aa17.8■□□□□ 0.44
CCDC78-216ENST00000544996 PCDHA10Q9Y5I2 948 aa17.8■□□□□ 0.44
CCDC78-216ENST00000544996 POTEB3A0JP26 581 aa17.79■□□□□ 0.44
CCDC78-216ENST00000544996 EDIL3O43854 480 aa17.79■□□□□ 0.44
CCDC78-216ENST00000544996 TDP2O95551 362 aa17.79■□□□□ 0.44
CCDC78-216ENST00000544996 PSAPP07602 524 aa17.79■□□□□ 0.44
CCDC78-216ENST00000544996 INSRRP14616 1297 aa17.79■□□□□ 0.44
CCDC78-216ENST00000544996 IGBP1P78318 339 aa17.79■□□□□ 0.44
CCDC78-216ENST00000544996 PLCB4Q15147 1175 aa17.79■□□□□ 0.44
CCDC78-216ENST00000544996 LETM2Q2VYF4 491 aa17.79■□□□□ 0.44
CCDC78-216ENST00000544996 LRCH2Q5VUJ6 765 aa17.79■□□□□ 0.44
CCDC78-216ENST00000544996 SWSAP1Q6NVH7 229 aa17.79■□□□□ 0.44
CCDC78-216ENST00000544996 PDXDC2PQ6P474 469 aa17.79■□□□□ 0.44
CCDC78-216ENST00000544996 POTEBQ6S5H4 581 aa17.79■□□□□ 0.44
CCDC78-216ENST00000544996 NEK8Q86SG6 692 aa17.79■□□□□ 0.44
CCDC78-216ENST00000544996 RSPH3Q86UC2 560 aa17.79■□□□□ 0.44
CCDC78-216ENST00000544996 OXER1Q8TDS5 423 aa17.79■□□□□ 0.44
CCDC78-216ENST00000544996 SLC5A5Q92911 643 aa17.79■□□□□ 0.44
CCDC78-216ENST00000544996 VWCEQ96DN2 955 aa17.79■□□□□ 0.44
CCDC78-216ENST00000544996 NAP1L4Q99733 375 aaKnown RBP17.79■□□□□ 0.44
CCDC78-216ENST00000544996 DDX25Q9UHL0 483 aaKnown RBP17.79■□□□□ 0.44
CCDC78-216ENST00000544996 DOCK5Q9H7D0 1870 aa17.79■□□□□ 0.44
CCDC78-216ENST00000544996 WDR64B1ANS9 1081 aa17.78■□□□□ 0.44
CCDC78-216ENST00000544996 BAIAP3O94812 1187 aa17.78■□□□□ 0.44
CCDC78-216ENST00000544996 RPLP2P05387 115 aaKnown RBP17.78■□□□□ 0.44
CCDC78-216ENST00000544996 GCFC2P16383 781 aaKnown RBP17.78■□□□□ 0.44
CCDC78-216ENST00000544996 HMGN5P82970 282 aaKnown RBP17.78■□□□□ 0.44
CCDC78-216ENST00000544996 ST3GAL1Q11201 340 aa17.78■□□□□ 0.44
CCDC78-216ENST00000544996 Q7L0L9 218 aa17.78■□□□□ 0.44
CCDC78-216ENST00000544996 CKAP2LQ8IYA6 745 aa17.78■□□□□ 0.44
CCDC78-216ENST00000544996 TEKT3Q9BXF9 490 aa17.78■□□□□ 0.44
CCDC78-216ENST00000544996 MBLAC1A4D2B0 266 aaPredicted RBP17.77■□□□□ 0.44
CCDC78-216ENST00000544996 HBP1O60381 514 aa17.77■□□□□ 0.44
CCDC78-216ENST00000544996 NBNO60934 754 aa17.77■□□□□ 0.44
CCDC78-216ENST00000544996 CXCL10P02778 98 aa17.77■□□□□ 0.44
CCDC78-216ENST00000544996 MMP1P03956 469 aa17.77■□□□□ 0.44
CCDC78-216ENST00000544996 CTSHP09668 335 aa17.77■□□□□ 0.44
CCDC78-216ENST00000544996 ATP2A2P16615 1042 aaKnown RBP17.77■□□□□ 0.44
CCDC78-216ENST00000544996 SFNP31947 248 aa17.77■□□□□ 0.44
CCDC78-216ENST00000544996 FOSBP53539 338 aa17.77■□□□□ 0.44
CCDC78-216ENST00000544996 GPNMBQ14956 572 aa17.77■□□□□ 0.44
CCDC78-216ENST00000544996 SAFBQ15424 915 aaKnown RBP eCLIP17.77■□□□□ 0.44
CCDC78-216ENST00000544996 KRT40Q6A162 431 aa17.77■□□□□ 0.44
CCDC78-216ENST00000544996 PPP4R3AQ6IN85 833 aa17.77■□□□□ 0.44
CCDC78-216ENST00000544996 CNKSR3Q6P9H4 555 aa17.77■□□□□ 0.44
CCDC78-216ENST00000544996 TRAF7Q6Q0C0 670 aa17.77■□□□□ 0.44
CCDC78-216ENST00000544996 CCDC60Q8IWA6 550 aaPredicted RBP17.77■□□□□ 0.44
CCDC78-216ENST00000544996 ATP8B4Q8TF62 1192 aa17.77■□□□□ 0.44
CCDC78-216ENST00000544996 MBOAT7Q96N66 472 aa17.77■□□□□ 0.44
CCDC78-216ENST00000544996 DISC1Q9NRI5 854 aa17.77■□□□□ 0.44
CCDC78-216ENST00000544996 MSRAQ9UJ68 235 aa17.77■□□□□ 0.44
CCDC78-216ENST00000544996 TMEM265A0A087WTH1 108 aa17.76■□□□□ 0.43
CCDC78-216ENST00000544996 GRXCR1A8MXD5 290 aa17.76■□□□□ 0.43
CCDC78-216ENST00000544996 CHMP2AO43633 222 aa17.76■□□□□ 0.43
CCDC78-216ENST00000544996 CCNT1O60563 726 aaKnown RBP17.76■□□□□ 0.43
CCDC78-216ENST00000544996 EFCAB14O75071 495 aa17.76■□□□□ 0.43
CCDC78-216ENST00000544996 DNAJB2P25686 324 aa17.76■□□□□ 0.43
CCDC78-216ENST00000544996 KCNJ6P48051 423 aa17.76■□□□□ 0.43
CCDC78-216ENST00000544996 JAK3P52333 1124 aa17.76■□□□□ 0.43
CCDC78-216ENST00000544996 NR5A1Q13285 461 aa17.76■□□□□ 0.43
CCDC78-216ENST00000544996 RAB30Q15771 203 aa17.76■□□□□ 0.43
CCDC78-216ENST00000544996 MARCH8Q5T0T0 291 aa17.76■□□□□ 0.43
CCDC78-216ENST00000544996 RPAINQ86UA6 219 aa17.76■□□□□ 0.43
CCDC78-216ENST00000544996 FAM184AQ8NB25 1140 aa17.76■□□□□ 0.43
CCDC78-216ENST00000544996 GABBR1Q9UBS5 961 aa17.76■□□□□ 0.43
CCDC78-216ENST00000544996 MAFBQ9Y5Q3 323 aaPredicted RBP17.76■□□□□ 0.43
CCDC78-216ENST00000544996 ABHD14A-ACY1A0A1B0GW23 586 aa17.75■□□□□ 0.43
CCDC78-216ENST00000544996 MARCH6O60337 910 aa17.75■□□□□ 0.43
CCDC78-216ENST00000544996 PSMD10O75832 226 aa17.75■□□□□ 0.43
CCDC78-216ENST00000544996 IKBKEQ14164 716 aa17.75■□□□□ 0.43
CCDC78-216ENST00000544996 MBTPS1Q14703 1052 aa17.75■□□□□ 0.43
CCDC78-216ENST00000544996 ZNF484Q5JVG2 852 aa17.75■□□□□ 0.43
CCDC78-216ENST00000544996 RUFY4Q6ZNE9 571 aa17.75■□□□□ 0.43
CCDC78-216ENST00000544996 DIS3L2Q8IYB7 885 aaKnown RBP17.75■□□□□ 0.43
CCDC78-216ENST00000544996 RDM1Q8NG50 284 aa17.75■□□□□ 0.43
CCDC78-216ENST00000544996 ETNPPLQ8TBG4 499 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms