RNA–Protein interactions for RNA: ENST00000544907.6

TNFAIP1-202, Transcript of TNF alpha induced protein 1, humanhuman

TSL 2 BASIC

Gene TNFAIP1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-202ENST00000544907 CXCL9Q07325 125 aa19.91■□□□□ 0.78
TNFAIP1-202ENST00000544907 ADAM9Q13443 819 aa19.91■□□□□ 0.78
TNFAIP1-202ENST00000544907 TNIP1Q15025 636 aa19.91■□□□□ 0.78
TNFAIP1-202ENST00000544907 KNOP1Q1ED39 458 aaKnown RBP19.91■□□□□ 0.78
TNFAIP1-202ENST00000544907 ZBED3Q96IU2 234 aaPredicted RBP19.91■□□□□ 0.78
TNFAIP1-202ENST00000544907 UBXN6Q9BZV1 441 aa19.91■□□□□ 0.78
TNFAIP1-202ENST00000544907 LUC7LQ9NQ29 371 aaKnown RBP19.91■□□□□ 0.78
TNFAIP1-202ENST00000544907 JRKLQ9Y4A0 524 aa19.91■□□□□ 0.78
TNFAIP1-202ENST00000544907 LRRC53A6NM62 1247 aa19.9■□□□□ 0.78
TNFAIP1-202ENST00000544907 TCP10L2B9ZVM9 353 aa19.9■□□□□ 0.78
TNFAIP1-202ENST00000544907 EPHB6O15197 1021 aa19.9■□□□□ 0.78
TNFAIP1-202ENST00000544907 EIF3DO15371 548 aaKnown RBP eCLIP19.9■□□□□ 0.78
TNFAIP1-202ENST00000544907 SLC16A3O15427 465 aaKnown RBP19.9■□□□□ 0.78
TNFAIP1-202ENST00000544907 ITIH3Q06033 890 aa19.9■□□□□ 0.78
TNFAIP1-202ENST00000544907 DPY19L2Q6NUT2 758 aa19.9■□□□□ 0.78
TNFAIP1-202ENST00000544907 WDR93Q6P2C0 686 aa19.9■□□□□ 0.78
TNFAIP1-202ENST00000544907 OTOP1Q7RTM1 612 aa19.9■□□□□ 0.78
TNFAIP1-202ENST00000544907 CACNA2D4Q7Z3S7 1137 aa19.9■□□□□ 0.78
TNFAIP1-202ENST00000544907 RNF10Q8N5U6 811 aaKnown RBP19.9■□□□□ 0.78
TNFAIP1-202ENST00000544907 EIF2AK1Q9BQI3 630 aaKnown RBP19.9■□□□□ 0.78
TNFAIP1-202ENST00000544907 IFIH1Q9BYX4 1025 aaKnown RBP19.9■□□□□ 0.78
TNFAIP1-202ENST00000544907 WDR11Q9BZH6 1224 aa19.9■□□□□ 0.78
TNFAIP1-202ENST00000544907 TANGO6Q9C0B7 1094 aa19.9■□□□□ 0.78
TNFAIP1-202ENST00000544907 LACRTQ9GZZ8 138 aa19.9■□□□□ 0.78
TNFAIP1-202ENST00000544907 METTL14Q9HCE5 456 aaKnown RBP19.9■□□□□ 0.78
TNFAIP1-202ENST00000544907 PCDHA13Q9Y5I0 950 aa19.9■□□□□ 0.78
TNFAIP1-202ENST00000544907 UBE4BO95155 1302 aa19.89■□□□□ 0.78
TNFAIP1-202ENST00000544907 ZNF263O14978 683 aa19.89■□□□□ 0.77
TNFAIP1-202ENST00000544907 PSMD10O75832 226 aa19.89■□□□□ 0.77
TNFAIP1-202ENST00000544907 TBC1D8O95759 1140 aa19.89■□□□□ 0.77
TNFAIP1-202ENST00000544907 SERPING1P05155 500 aa19.89■□□□□ 0.77
TNFAIP1-202ENST00000544907 RPL13P26373 211 aaKnown RBP19.89■□□□□ 0.77
TNFAIP1-202ENST00000544907 CAP2P40123 477 aa19.89■□□□□ 0.77
TNFAIP1-202ENST00000544907 ECE1P42892 770 aa19.89■□□□□ 0.77
TNFAIP1-202ENST00000544907 GHRHRQ02643 423 aa19.89■□□□□ 0.77
TNFAIP1-202ENST00000544907 IQCEQ6IPM2 695 aa19.89■□□□□ 0.77
TNFAIP1-202ENST00000544907 RRAGAQ7L523 313 aa19.89■□□□□ 0.77
TNFAIP1-202ENST00000544907 SAMD3Q8N6K7 520 aa19.89■□□□□ 0.77
TNFAIP1-202ENST00000544907 REEP2Q9BRK0 252 aa19.89■□□□□ 0.77
TNFAIP1-202ENST00000544907 DEF6Q9H4E7 631 aa19.89■□□□□ 0.77
TNFAIP1-202ENST00000544907 PLCB1Q9NQ66 1216 aa19.89■□□□□ 0.77
TNFAIP1-202ENST00000544907 TYW1Q9NV66 732 aaKnown RBP19.89■□□□□ 0.77
TNFAIP1-202ENST00000544907 SEL1LQ9UBV2 794 aa19.89■□□□□ 0.77
TNFAIP1-202ENST00000544907 TRIM10Q9UDY6 481 aa19.89■□□□□ 0.77
TNFAIP1-202ENST00000544907 PUF60Q9UHX1 559 aaKnown RBP19.89■□□□□ 0.77
TNFAIP1-202ENST00000544907 GJA3Q9Y6H8 435 aa19.89■□□□□ 0.77
TNFAIP1-202ENST00000544907 ATAD5Q96QE3 1844 aa19.88■□□□□ 0.77
TNFAIP1-202ENST00000544907 TACC1O75410 805 aa19.88■□□□□ 0.77
TNFAIP1-202ENST00000544907 ASNSP08243 561 aa19.88■□□□□ 0.77
TNFAIP1-202ENST00000544907 ANXA13P27216 316 aa19.88■□□□□ 0.77
TNFAIP1-202ENST00000544907 EIF4A3P38919 411 aaKnown RBP19.88■□□□□ 0.77
TNFAIP1-202ENST00000544907 SNAP25P60880 206 aa19.88■□□□□ 0.77
TNFAIP1-202ENST00000544907 SLC9C1Q4G0N8 1177 aa19.88■□□□□ 0.77
TNFAIP1-202ENST00000544907 FAM83BQ5T0W9 1011 aa19.88■□□□□ 0.77
TNFAIP1-202ENST00000544907 GPC2Q8N158 579 aa19.88■□□□□ 0.77
TNFAIP1-202ENST00000544907 CCDC155Q8N6L0 562 aa19.88■□□□□ 0.77
TNFAIP1-202ENST00000544907 NEK9Q8TD19 979 aa19.88■□□□□ 0.77
TNFAIP1-202ENST00000544907 ACER1Q8TDN7 264 aa19.88■□□□□ 0.77
TNFAIP1-202ENST00000544907 FGFBP2Q9BYJ0 223 aa19.88■□□□□ 0.77
TNFAIP1-202ENST00000544907 AIPL1Q9NZN9 384 aa19.88■□□□□ 0.77
TNFAIP1-202ENST00000544907 FBXL5Q9UKA1 691 aa19.88■□□□□ 0.77
TNFAIP1-202ENST00000544907 TARSL2A2RTX5 802 aaKnown RBP19.87■□□□□ 0.77
TNFAIP1-202ENST00000544907 RCCD1A6NED2 376 aa19.87■□□□□ 0.77
TNFAIP1-202ENST00000544907 AKR1B10O60218 316 aa19.87■□□□□ 0.77
TNFAIP1-202ENST00000544907 TBCAO75347 108 aaKnown RBP19.87■□□□□ 0.77
TNFAIP1-202ENST00000544907 NOL4O94818 638 aa19.87■□□□□ 0.77
TNFAIP1-202ENST00000544907 PSMC6P62333 389 aa19.87■□□□□ 0.77
TNFAIP1-202ENST00000544907 PABPC4Q13310 644 aaKnown RBP eCLIP19.87■□□□□ 0.77
TNFAIP1-202ENST00000544907 HGSNATQ68CP4 663 aa19.87■□□□□ 0.77
TNFAIP1-202ENST00000544907 ZNF572Q7Z3I7 529 aaPredicted RBP19.87■□□□□ 0.77
TNFAIP1-202ENST00000544907 KRT26Q7Z3Y9 468 aa19.87■□□□□ 0.77
TNFAIP1-202ENST00000544907 MAP3K20Q9NYL2 800 aaKnown RBP19.87■□□□□ 0.77
TNFAIP1-202ENST00000544907 PGAP2Q9UHJ9 254 aa19.87■□□□□ 0.77
TNFAIP1-202ENST00000544907 PNMA2Q9UL42 364 aa19.87■□□□□ 0.77
TNFAIP1-202ENST00000544907 ATP8B3O60423 1300 aa19.87■□□□□ 0.77
TNFAIP1-202ENST00000544907 NPHP3-ACAD11A0A0J9YXS1 232 aa19.87■□□□□ 0.77
TNFAIP1-202ENST00000544907 MAP2K7O14733 419 aa19.87■□□□□ 0.77
TNFAIP1-202ENST00000544907 BCRP11274 1271 aa19.87■□□□□ 0.77
TNFAIP1-202ENST00000544907 NR2F2P24468 414 aa19.87■□□□□ 0.77
TNFAIP1-202ENST00000544907 HOXA13P31271 388 aaPredicted RBP19.87■□□□□ 0.77
TNFAIP1-202ENST00000544907 PLA2G4AP47712 749 aa19.87■□□□□ 0.77
TNFAIP1-202ENST00000544907 CEP55Q53EZ4 464 aa19.87■□□□□ 0.77
TNFAIP1-202ENST00000544907 KIAA1755Q5JYT7 1200 aa19.87■□□□□ 0.77
TNFAIP1-202ENST00000544907 SFMBT2Q5VUG0 894 aa19.87■□□□□ 0.77
TNFAIP1-202ENST00000544907 NIPA1Q7RTP0 329 aa19.87■□□□□ 0.77
TNFAIP1-202ENST00000544907 SPICE1Q8N0Z3 855 aa19.87■□□□□ 0.77
TNFAIP1-202ENST00000544907 RUBCNQ92622 972 aa19.87■□□□□ 0.77
TNFAIP1-202ENST00000544907 ALS2CR12Q96Q35 445 aa19.87■□□□□ 0.77
TNFAIP1-202ENST00000544907 FUT8Q9BYC5 575 aa19.87■□□□□ 0.77
TNFAIP1-202ENST00000544907 CLRN2A0PK11 232 aa19.86■□□□□ 0.77
TNFAIP1-202ENST00000544907 GTPBP10A4D1E9 387 aaKnown RBP19.86■□□□□ 0.77
TNFAIP1-202ENST00000544907 GLTPD2A6NH11 291 aa19.86■□□□□ 0.77
TNFAIP1-202ENST00000544907 MEIS1O00470 390 aa19.86■□□□□ 0.77
TNFAIP1-202ENST00000544907 ATP1A1P05023 1023 aaKnown RBP19.86■□□□□ 0.77
TNFAIP1-202ENST00000544907 LONRF2Q1L5Z9 754 aa19.86■□□□□ 0.77
TNFAIP1-202ENST00000544907 LRCH2Q5VUJ6 765 aa19.86■□□□□ 0.77
TNFAIP1-202ENST00000544907 B3GNT9Q6UX72 402 aa19.86■□□□□ 0.77
TNFAIP1-202ENST00000544907 SFR1Q86XK3 245 aa19.86■□□□□ 0.77
TNFAIP1-202ENST00000544907 NELFCDQ8IXH7 590 aa19.86■□□□□ 0.77
TNFAIP1-202ENST00000544907 RIT2Q99578 217 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms