RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 WASF1Q92558 559 aa12.97□□□□□ -0.33
YBX3-216ENST00000544622 CAND2O75155 1236 aa12.96□□□□□ -0.33
YBX3-216ENST00000544622 PLCB4Q15147 1175 aa12.96□□□□□ -0.33
YBX3-216ENST00000544622 NONOQ15233 471 aaKnown RBP eCLIP12.96□□□□□ -0.33
YBX3-216ENST00000544622 EARS2Q5JPH6 523 aaKnown RBP12.96□□□□□ -0.33
YBX3-216ENST00000544622 ZNF746Q6NUN9 644 aaPredicted RBP12.96□□□□□ -0.33
YBX3-216ENST00000544622 Q7L0L9 218 aa12.96□□□□□ -0.33
YBX3-216ENST00000544622 DEFB128Q7Z7B8 93 aa12.96□□□□□ -0.33
YBX3-216ENST00000544622 CCDC60Q8IWA6 550 aaPredicted RBP12.96□□□□□ -0.33
YBX3-216ENST00000544622 SMAP1Q8IYB5 467 aaPredicted RBP12.96□□□□□ -0.33
YBX3-216ENST00000544622 GLG1Q92896 1179 aa12.96□□□□□ -0.33
YBX3-216ENST00000544622 SLC5A5Q92911 643 aa12.96□□□□□ -0.33
YBX3-216ENST00000544622 ZSCAN31Q96LW9 406 aaPredicted RBP12.96□□□□□ -0.33
YBX3-216ENST00000544622 RIT2Q99578 217 aa12.96□□□□□ -0.33
YBX3-216ENST00000544622 AZI2Q9H6S1 392 aa12.96□□□□□ -0.33
YBX3-216ENST00000544622 MTMR10Q9NXD2 777 aa12.96□□□□□ -0.33
YBX3-216ENST00000544622 MAFBQ9Y5Q3 323 aaPredicted RBP12.96□□□□□ -0.33
YBX3-216ENST00000544622 TRIP12Q14669 1992 aaPredicted RBP12.96□□□□□ -0.34
YBX3-216ENST00000544622 TANC1Q9C0D5 1861 aa12.95□□□□□ -0.34
YBX3-216ENST00000544622 SCN5AQ14524 2016 aa12.95□□□□□ -0.34
YBX3-216ENST00000544622 CHD7Q9P2D1 2997 aa12.95□□□□□ -0.34
YBX3-216ENST00000544622 PSMD10O75832 226 aa12.95□□□□□ -0.34
YBX3-216ENST00000544622 TDP2O95551 362 aa12.95□□□□□ -0.34
YBX3-216ENST00000544622 INSRRP14616 1297 aa12.95□□□□□ -0.34
YBX3-216ENST00000544622 MARK3P27448 753 aa12.95□□□□□ -0.34
YBX3-216ENST00000544622 KRT76Q01546 638 aa12.95□□□□□ -0.34
YBX3-216ENST00000544622 MKRN4PQ13434 485 aaPredicted RBP12.95□□□□□ -0.34
YBX3-216ENST00000544622 INF2Q27J81 1249 aa12.95□□□□□ -0.34
YBX3-216ENST00000544622 FAM26DQ5JW98 314 aa12.95□□□□□ -0.34
YBX3-216ENST00000544622 PPP4R3AQ6IN85 833 aa12.95□□□□□ -0.34
YBX3-216ENST00000544622 KRT25Q7Z3Z0 450 aa12.95□□□□□ -0.34
YBX3-216ENST00000544622 DEFB123Q8N688 67 aa12.95□□□□□ -0.34
YBX3-216ENST00000544622 ETNPPLQ8TBG4 499 aa12.95□□□□□ -0.34
YBX3-216ENST00000544622 LLPHQ9BRT6 129 aaKnown RBP12.95□□□□□ -0.34
YBX3-216ENST00000544622 TTYH1Q9H313 450 aaPredicted RBP12.95□□□□□ -0.34
YBX3-216ENST00000544622 PCDHA10Q9Y5I2 948 aa12.95□□□□□ -0.34
YBX3-216ENST00000544622 TET1Q8NFU7 2136 aa12.95□□□□□ -0.34
YBX3-216ENST00000544622 TMEM265A0A087WTH1 108 aa12.94□□□□□ -0.34
YBX3-216ENST00000544622 RRN3P2A6NIE6 340 aa12.94□□□□□ -0.34
YBX3-216ENST00000544622 GRXCR1A8MXD5 290 aa12.94□□□□□ -0.34
YBX3-216ENST00000544622 RSPH10B2B2RC85 870 aa12.94□□□□□ -0.34
YBX3-216ENST00000544622 RBAK-RBAKDNI3L0D1 243 aa12.94□□□□□ -0.34
YBX3-216ENST00000544622 DDX39AO00148 427 aaKnown RBP12.94□□□□□ -0.34
YBX3-216ENST00000544622 MMP1P03956 469 aa12.94□□□□□ -0.34
YBX3-216ENST00000544622 RSPH10BP0C881 870 aa12.94□□□□□ -0.34
YBX3-216ENST00000544622 THPOP40225 353 aa12.94□□□□□ -0.34
YBX3-216ENST00000544622 PPFIA1Q13136 1202 aa12.94□□□□□ -0.34
YBX3-216ENST00000544622 RABEP1Q15276 862 aa12.94□□□□□ -0.34
YBX3-216ENST00000544622 GRIK4Q16099 956 aa12.94□□□□□ -0.34
YBX3-216ENST00000544622 TCTN1Q2MV58 587 aa12.94□□□□□ -0.34
YBX3-216ENST00000544622 SWSAP1Q6NVH7 229 aa12.94□□□□□ -0.34
YBX3-216ENST00000544622 MIS18BP1Q6P0N0 1132 aa12.94□□□□□ -0.34
YBX3-216ENST00000544622 TAF2Q6P1X5 1199 aa12.94□□□□□ -0.34
YBX3-216ENST00000544622 RUFY4Q6ZNE9 571 aa12.94□□□□□ -0.34
YBX3-216ENST00000544622 TNPO1Q92973 898 aaKnown RBP12.94□□□□□ -0.34
YBX3-216ENST00000544622 TBC1D32Q96NH3 1257 aa12.94□□□□□ -0.34
YBX3-216ENST00000544622 UIMC1Q96RL1 719 aa12.94□□□□□ -0.34
YBX3-216ENST00000544622 PBX4Q9BYU1 374 aa12.94□□□□□ -0.34
YBX3-216ENST00000544622 OSBPL7Q9BZF2 842 aa12.94□□□□□ -0.34
YBX3-216ENST00000544622 MTIF3Q9H2K0 278 aaKnown RBP12.94□□□□□ -0.34
YBX3-216ENST00000544622 SEMA6BQ9H3T3 888 aa12.94□□□□□ -0.34
YBX3-216ENST00000544622 SH2B1Q9NRF2 756 aaPredicted RBP12.94□□□□□ -0.34
YBX3-216ENST00000544622 POTEB3A0JP26 581 aa12.93□□□□□ -0.34
YBX3-216ENST00000544622 ZBTB42B2RXF5 422 aa12.93□□□□□ -0.34
YBX3-216ENST00000544622 BTBD18B2RXH4 712 aa12.93□□□□□ -0.34
YBX3-216ENST00000544622 SLC37A4O43826 429 aa12.93□□□□□ -0.34
YBX3-216ENST00000544622 BAIAP3O94812 1187 aa12.93□□□□□ -0.34
YBX3-216ENST00000544622 PBX2P40425 430 aa12.93□□□□□ -0.34
YBX3-216ENST00000544622 MGAT3Q09327 533 aa12.93□□□□□ -0.34
YBX3-216ENST00000544622 NR5A1Q13285 461 aa12.93□□□□□ -0.34
YBX3-216ENST00000544622 KRT40Q6A162 431 aa12.93□□□□□ -0.34
YBX3-216ENST00000544622 CNKSR3Q6P9H4 555 aa12.93□□□□□ -0.34
YBX3-216ENST00000544622 POTEBQ6S5H4 581 aa12.93□□□□□ -0.34
YBX3-216ENST00000544622 PIK3AP1Q6ZUJ8 805 aa12.93□□□□□ -0.34
YBX3-216ENST00000544622 NEK8Q86SG6 692 aa12.93□□□□□ -0.34
YBX3-216ENST00000544622 CCDC83Q8IWF9 413 aa12.93□□□□□ -0.34
YBX3-216ENST00000544622 PHOSPHO2Q8TCD6 241 aa12.93□□□□□ -0.34
YBX3-216ENST00000544622 ATP8B4Q8TF62 1192 aa12.93□□□□□ -0.34
YBX3-216ENST00000544622 GJA10Q969M2 543 aa12.93□□□□□ -0.34
YBX3-216ENST00000544622 KCNMB3Q9NPA1 279 aa12.93□□□□□ -0.34
YBX3-216ENST00000544622 ZNF302Q9NR11 478 aa12.93□□□□□ -0.34
YBX3-216ENST00000544622 TUBE1Q9UJT0 475 aa12.93□□□□□ -0.34
YBX3-216ENST00000544622 PCDHA2Q9Y5H9 948 aa12.93□□□□□ -0.34
YBX3-216ENST00000544622 SLC4A7Q9Y6M7 1214 aa12.93□□□□□ -0.34
YBX3-216ENST00000544622 CCDC194A0A1B0GVG4 234 aa12.92□□□□□ -0.34
YBX3-216ENST00000544622 WDR64B1ANS9 1081 aa12.92□□□□□ -0.34
YBX3-216ENST00000544622 HBP1O60381 514 aa12.92□□□□□ -0.34
YBX3-216ENST00000544622 CHRNA1P02708 482 aa12.92□□□□□ -0.34
YBX3-216ENST00000544622 ACTN1P12814 892 aa12.92□□□□□ -0.34
YBX3-216ENST00000544622 DNAJB2P25686 324 aa12.92□□□□□ -0.34
YBX3-216ENST00000544622 KRT2P35908 639 aa12.92□□□□□ -0.34
YBX3-216ENST00000544622 LETM2Q2VYF4 491 aa12.92□□□□□ -0.34
YBX3-216ENST00000544622 PLEKHG4Q58EX7 1191 aa12.92□□□□□ -0.34
YBX3-216ENST00000544622 FAM160B1Q5W0V3 765 aa12.92□□□□□ -0.34
YBX3-216ENST00000544622 BBXQ8WY36 941 aaPredicted RBP12.92□□□□□ -0.34
YBX3-216ENST00000544622 HAS1Q92839 578 aa12.92□□□□□ -0.34
YBX3-216ENST00000544622 ZBTB10Q96DT7 871 aa12.92□□□□□ -0.34
YBX3-216ENST00000544622 GUCD1Q96NT3 240 aa12.92□□□□□ -0.34
YBX3-216ENST00000544622 FTOQ9C0B1 505 aaKnown RBP eCLIP12.92□□□□□ -0.34
YBX3-216ENST00000544622 UNC45AQ9H3U1 944 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms