RNA–Protein interactions for RNA: ENST00000544373.5

CHEK1-218, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-218ENST00000544373 ZNF76P36508 570 aa12.21□□□□□ -0.45
CHEK1-218ENST00000544373 KCNJ6P48051 423 aa12.21□□□□□ -0.45
CHEK1-218ENST00000544373 ACTR2P61160 394 aa12.21□□□□□ -0.45
CHEK1-218ENST00000544373 PPFIA1Q13136 1202 aa12.21□□□□□ -0.45
CHEK1-218ENST00000544373 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.21□□□□□ -0.45
CHEK1-218ENST00000544373 REXO1Q8N1G1 1221 aaKnown RBP12.21□□□□□ -0.45
CHEK1-218ENST00000544373 PPM1EQ8WY54 764 aa12.21□□□□□ -0.45
CHEK1-218ENST00000544373 RNF26Q9BY78 433 aaPredicted RBP12.21□□□□□ -0.45
CHEK1-218ENST00000544373 TM6SF1Q9BZW5 370 aa12.21□□□□□ -0.45
CHEK1-218ENST00000544373 GLT8D2Q9H1C3 349 aa12.21□□□□□ -0.45
CHEK1-218ENST00000544373 C6orf50Q9HD87 102 aa12.21□□□□□ -0.45
CHEK1-218ENST00000544373 PRDM6Q9NQX0 595 aa12.21□□□□□ -0.45
CHEK1-218ENST00000544373 ERAP1Q9NZ08 941 aa12.21□□□□□ -0.45
CHEK1-218ENST00000544373 MUC3AQ02505 3323 aa12.2□□□□□ -0.46
CHEK1-218ENST00000544373 NFASCO94856 1347 aa12.2□□□□□ -0.46
CHEK1-218ENST00000544373 IGLV3-22A0A075B6J6 115 aa12.2□□□□□ -0.46
CHEK1-218ENST00000544373 DLL1O00548 723 aa12.2□□□□□ -0.46
CHEK1-218ENST00000544373 DHX15O43143 795 aaKnown RBP12.2□□□□□ -0.46
CHEK1-218ENST00000544373 IGFBP4P22692 258 aa12.2□□□□□ -0.46
CHEK1-218ENST00000544373 AKAP17AQ02040 695 aaKnown RBP12.2□□□□□ -0.46
CHEK1-218ENST00000544373 TAP1Q03518 808 aa12.2□□□□□ -0.46
CHEK1-218ENST00000544373 STK3Q13188 491 aa12.2□□□□□ -0.46
CHEK1-218ENST00000544373 IKBKEQ14164 716 aa12.2□□□□□ -0.46
CHEK1-218ENST00000544373 GRIK4Q16099 956 aa12.2□□□□□ -0.46
CHEK1-218ENST00000544373 ERICH6BQ5W0A0 696 aa12.2□□□□□ -0.46
CHEK1-218ENST00000544373 FAM117BQ6P1L5 589 aa12.2□□□□□ -0.46
CHEK1-218ENST00000544373 PLA2G4DQ86XP0 818 aa12.2□□□□□ -0.46
CHEK1-218ENST00000544373 GAS2L1Q99501 681 aaPredicted RBP12.2□□□□□ -0.46
CHEK1-218ENST00000544373 SMARCAD1Q9H4L7 1026 aa12.2□□□□□ -0.46
CHEK1-218ENST00000544373 PDRG1Q9NUG6 133 aa12.2□□□□□ -0.46
CHEK1-218ENST00000544373 TANC1Q9C0D5 1861 aa12.2□□□□□ -0.46
CHEK1-218ENST00000544373 REV3LO60673 3130 aa12.2□□□□□ -0.46
CHEK1-218ENST00000544373 EMSYQ7Z589 1322 aa12.2□□□□□ -0.46
CHEK1-218ENST00000544373 ABHD14A-ACY1A0A1B0GW23 586 aa12.19□□□□□ -0.46
CHEK1-218ENST00000544373 TLL1O43897 1013 aa12.19□□□□□ -0.46
CHEK1-218ENST00000544373 CHRNA1P02708 482 aa12.19□□□□□ -0.46
CHEK1-218ENST00000544373 CYP3A4P08684 503 aa12.19□□□□□ -0.46
CHEK1-218ENST00000544373 INSRRP14616 1297 aa12.19□□□□□ -0.46
CHEK1-218ENST00000544373 IGBP1P78318 339 aa12.19□□□□□ -0.46
CHEK1-218ENST00000544373 PLCB4Q15147 1175 aa12.19□□□□□ -0.46
CHEK1-218ENST00000544373 CCDC85BQ15834 202 aaPredicted RBP12.19□□□□□ -0.46
CHEK1-218ENST00000544373 PLEKHG4Q58EX7 1191 aa12.19□□□□□ -0.46
CHEK1-218ENST00000544373 TRAPPC12Q8WVT3 735 aa12.19□□□□□ -0.46
CHEK1-218ENST00000544373 ZNF274Q96GC6 653 aaPredicted RBP12.19□□□□□ -0.46
CHEK1-218ENST00000544373 SDF4Q9BRK5 362 aa12.19□□□□□ -0.46
CHEK1-218ENST00000544373 MBLAC1A4D2B0 266 aaPredicted RBP12.19□□□□□ -0.46
CHEK1-218ENST00000544373 KIF28PB7ZC32 967 aa12.19□□□□□ -0.46
CHEK1-218ENST00000544373 ATG7O95352 703 aa12.19□□□□□ -0.46
CHEK1-218ENST00000544373 GJB5O95377 273 aa12.19□□□□□ -0.46
CHEK1-218ENST00000544373 GNA11P29992 359 aa12.19□□□□□ -0.46
CHEK1-218ENST00000544373 STAT5BP51692 787 aa12.19□□□□□ -0.46
CHEK1-218ENST00000544373 ABHD15Q6UXT9 468 aa12.19□□□□□ -0.46
CHEK1-218ENST00000544373 NIPA1Q7RTP0 329 aa12.19□□□□□ -0.46
CHEK1-218ENST00000544373 CCDC12Q8WUD4 166 aaPredicted RBP12.19□□□□□ -0.46
CHEK1-218ENST00000544373 ARNTL2Q8WYA1 636 aa12.19□□□□□ -0.46
CHEK1-218ENST00000544373 AIFM3Q96NN9 605 aa12.19□□□□□ -0.46
CHEK1-218ENST00000544373 ZBED2Q9BTP6 218 aa12.19□□□□□ -0.46
CHEK1-218ENST00000544373 AZI2Q9H6S1 392 aa12.19□□□□□ -0.46
CHEK1-218ENST00000544373 TUBE1Q9UJT0 475 aa12.19□□□□□ -0.46
CHEK1-218ENST00000544373 IGKV6D-21A0A0A0MT36 114 aa12.18□□□□□ -0.46
CHEK1-218ENST00000544373 IPO5O00410 1097 aaKnown RBP12.18□□□□□ -0.46
CHEK1-218ENST00000544373 CAND2O75155 1236 aa12.18□□□□□ -0.46
CHEK1-218ENST00000544373 FAM26DQ5JW98 314 aa12.18□□□□□ -0.46
CHEK1-218ENST00000544373 KRT40Q6A162 431 aa12.18□□□□□ -0.46
CHEK1-218ENST00000544373 PLPPR4Q7Z2D5 763 aa12.18□□□□□ -0.46
CHEK1-218ENST00000544373 DNAJB3Q8WWF6 145 aa12.18□□□□□ -0.46
CHEK1-218ENST00000544373 TRPC6Q9Y210 931 aa12.18□□□□□ -0.46
CHEK1-218ENST00000544373 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.17□□□□□ -0.46
CHEK1-218ENST00000544373 CPLX1O14810 134 aa12.17□□□□□ -0.46
CHEK1-218ENST00000544373 SEC24BO95487 1268 aa12.17□□□□□ -0.46
CHEK1-218ENST00000544373 SSRP1Q08945 709 aaKnown RBP12.17□□□□□ -0.46
CHEK1-218ENST00000544373 MGAT3Q09327 533 aa12.17□□□□□ -0.46
CHEK1-218ENST00000544373 SCRN1Q12765 414 aa12.17□□□□□ -0.46
CHEK1-218ENST00000544373 PRR16Q569H4 304 aa12.17□□□□□ -0.46
CHEK1-218ENST00000544373 TAF2Q6P1X5 1199 aa12.17□□□□□ -0.46
CHEK1-218ENST00000544373 RPAINQ86UA6 219 aa12.17□□□□□ -0.46
CHEK1-218ENST00000544373 CCDC60Q8IWA6 550 aaPredicted RBP12.17□□□□□ -0.46
CHEK1-218ENST00000544373 MYOCDQ8IZQ8 938 aa12.17□□□□□ -0.46
CHEK1-218ENST00000544373 GJA10Q969M2 543 aa12.17□□□□□ -0.46
CHEK1-218ENST00000544373 LENG9Q96B70 501 aa12.17□□□□□ -0.46
CHEK1-218ENST00000544373 RAD9AQ99638 391 aa12.17□□□□□ -0.46
CHEK1-218ENST00000544373 ZNF577Q9BSK1 485 aa12.17□□□□□ -0.46
CHEK1-218ENST00000544373 COL25A1Q9BXS0 654 aaPredicted RBP12.17□□□□□ -0.46
CHEK1-218ENST00000544373 FAM49AQ9H0Q0 323 aaPredicted RBP12.17□□□□□ -0.46
CHEK1-218ENST00000544373 TPCN1Q9ULQ1 816 aa12.17□□□□□ -0.46
CHEK1-218ENST00000544373 EFCAB14O75071 495 aa12.16□□□□□ -0.46
CHEK1-218ENST00000544373 GHRP10912 638 aa12.16□□□□□ -0.46
CHEK1-218ENST00000544373 ATP4AP20648 1035 aa12.16□□□□□ -0.46
CHEK1-218ENST00000544373 CIITAP33076 1130 aa12.16□□□□□ -0.46
CHEK1-218ENST00000544373 NLRP5P59047 1200 aa12.16□□□□□ -0.46
CHEK1-218ENST00000544373 LPIN1Q14693 890 aa12.16□□□□□ -0.46
CHEK1-218ENST00000544373 NPY5RQ15761 445 aa12.16□□□□□ -0.46
CHEK1-218ENST00000544373 SWSAP1Q6NVH7 229 aa12.16□□□□□ -0.46
CHEK1-218ENST00000544373 TRIM22Q8IYM9 498 aa12.16□□□□□ -0.46
CHEK1-218ENST00000544373 CCDC148Q8NFR7 591 aa12.16□□□□□ -0.46
CHEK1-218ENST00000544373 BICD2Q8TD16 824 aa12.16□□□□□ -0.46
CHEK1-218ENST00000544373 GBF1Q92538 1859 aa12.16□□□□□ -0.46
CHEK1-218ENST00000544373 SEPT8Q92599 483 aa12.16□□□□□ -0.46
CHEK1-218ENST00000544373 SH3GLB2Q9NR46 395 aa12.16□□□□□ -0.46
CHEK1-218ENST00000544373 MTUS1Q9ULD2 1270 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 184.7 ms