RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 GNAT1P11488 350 aa10.98□□□□□ -0.65
C2CD3-220ENST00000544293 AVPR2P30518 371 aa10.98□□□□□ -0.65
C2CD3-220ENST00000544293 NT5C2P49902 561 aa10.98□□□□□ -0.65
C2CD3-220ENST00000544293 RBM23Q86U06 439 aaKnown RBP10.98□□□□□ -0.65
C2CD3-220ENST00000544293 POF1BQ8WVV4 589 aa10.98□□□□□ -0.65
C2CD3-220ENST00000544293 PCYT2Q99447 389 aa10.98□□□□□ -0.65
C2CD3-220ENST00000544293 SENP7Q9BQF6 1050 aa10.98□□□□□ -0.65
C2CD3-220ENST00000544293 S1PR5Q9H228 398 aa10.98□□□□□ -0.65
C2CD3-220ENST00000544293 TMX1Q9H3N1 280 aa10.98□□□□□ -0.65
C2CD3-220ENST00000544293 RWDD3Q9Y3V2 267 aa10.98□□□□□ -0.65
C2CD3-220ENST00000544293 USP15Q9Y4E8 981 aaPredicted RBP10.98□□□□□ -0.65
C2CD3-220ENST00000544293 PTPRZ1P23471 2315 aaPredicted RBP10.98□□□□□ -0.65
C2CD3-220ENST00000544293 NOP56O00567 594 aaKnown RBP10.97□□□□□ -0.65
C2CD3-220ENST00000544293 MEIS2O14770 477 aa10.97□□□□□ -0.65
C2CD3-220ENST00000544293 PER2O15055 1255 aa10.97□□□□□ -0.65
C2CD3-220ENST00000544293 FIBPO43427 364 aa10.97□□□□□ -0.65
C2CD3-220ENST00000544293 ARP10275 920 aa10.97□□□□□ -0.65
C2CD3-220ENST00000544293 KCNA2P16389 499 aa10.97□□□□□ -0.65
C2CD3-220ENST00000544293 CD52P31358 61 aa10.97□□□□□ -0.65
C2CD3-220ENST00000544293 NRIP1P48552 1158 aa10.97□□□□□ -0.65
C2CD3-220ENST00000544293 NDUFV1P49821 464 aa10.97□□□□□ -0.65
C2CD3-220ENST00000544293 TROAPQ12815 778 aa10.97□□□□□ -0.65
C2CD3-220ENST00000544293 HDAC1Q13547 482 aaPredicted RBP10.97□□□□□ -0.65
C2CD3-220ENST00000544293 GRM4Q14833 912 aa10.97□□□□□ -0.65
C2CD3-220ENST00000544293 USP17L6PQ6QN14 398 aa10.97□□□□□ -0.65
C2CD3-220ENST00000544293 CWC27Q6UX04 472 aaKnown RBP10.97□□□□□ -0.65
C2CD3-220ENST00000544293 HOMER1Q86YM7 354 aa10.97□□□□□ -0.65
C2CD3-220ENST00000544293 PLEKHM2Q8IWE5 1019 aa10.97□□□□□ -0.65
C2CD3-220ENST00000544293 CMTR2Q8IYT2 770 aaKnown RBP10.97□□□□□ -0.65
C2CD3-220ENST00000544293 RILPL2Q969X0 211 aa10.97□□□□□ -0.65
C2CD3-220ENST00000544293 DSCC1Q9BVC3 393 aa10.97□□□□□ -0.65
C2CD3-220ENST00000544293 CDY2AQ9Y6F7 541 aa10.97□□□□□ -0.65
C2CD3-220ENST00000544293 TAF6LQ9Y6J9 622 aa10.97□□□□□ -0.65
C2CD3-220ENST00000544293 PNMA6FA0A0J9YX94 578 aa10.96□□□□□ -0.65
C2CD3-220ENST00000544293 STAM2O75886 525 aa10.96□□□□□ -0.65
C2CD3-220ENST00000544293 ITGB5P18084 799 aa10.96□□□□□ -0.65
C2CD3-220ENST00000544293 TCF7P36402 384 aaPredicted RBP10.96□□□□□ -0.65
C2CD3-220ENST00000544293 ERVFC1P60507 584 aa10.96□□□□□ -0.65
C2CD3-220ENST00000544293 SP4Q02446 784 aa10.96□□□□□ -0.65
C2CD3-220ENST00000544293 SIGLEC14Q08ET2 396 aa10.96□□□□□ -0.65
C2CD3-220ENST00000544293 GRIK4Q16099 956 aa10.96□□□□□ -0.65
C2CD3-220ENST00000544293 PKN1Q16512 942 aa10.96□□□□□ -0.65
C2CD3-220ENST00000544293 NAALADL2Q58DX5 795 aa10.96□□□□□ -0.65
C2CD3-220ENST00000544293 IFIT1BQ5T764 474 aaKnown RBP10.96□□□□□ -0.65
C2CD3-220ENST00000544293 TAF2Q6P1X5 1199 aa10.96□□□□□ -0.65
C2CD3-220ENST00000544293 TSHZ1Q6ZSZ6 1077 aa10.96□□□□□ -0.65
C2CD3-220ENST00000544293 IFNLR1Q8IU57 520 aaPredicted RBP10.96□□□□□ -0.65
C2CD3-220ENST00000544293 RPGRIP1Q96KN7 1286 aa10.96□□□□□ -0.65
C2CD3-220ENST00000544293 PHF7Q9BWX1 381 aaPredicted RBP10.96□□□□□ -0.65
C2CD3-220ENST00000544293 LNPKQ9C0E8 428 aa10.96□□□□□ -0.65
C2CD3-220ENST00000544293 OSBPL3Q9H4L5 887 aa10.96□□□□□ -0.65
C2CD3-220ENST00000544293 HCSTQ9UBK5 93 aa10.96□□□□□ -0.65
C2CD3-220ENST00000544293 CFAP54Q96N23 3096 aa10.95□□□□□ -0.66
C2CD3-220ENST00000544293 PROB1E7EW31 1015 aa10.95□□□□□ -0.66
C2CD3-220ENST00000544293 FSCN2O14926 492 aa10.95□□□□□ -0.66
C2CD3-220ENST00000544293 MGEA5O60502 916 aa10.95□□□□□ -0.66
C2CD3-220ENST00000544293 GFRA3O60609 400 aa10.95□□□□□ -0.66
C2CD3-220ENST00000544293 MARK3P27448 753 aa10.95□□□□□ -0.66
C2CD3-220ENST00000544293 PPFIA1Q13136 1202 aa10.95□□□□□ -0.66
C2CD3-220ENST00000544293 GNPTABQ3T906 1256 aa10.95□□□□□ -0.66
C2CD3-220ENST00000544293 PAN2Q504Q3 1202 aaKnown RBP10.95□□□□□ -0.66
C2CD3-220ENST00000544293 PCNX4Q63HM2 1172 aa10.95□□□□□ -0.66
C2CD3-220ENST00000544293 DIEXFQ68CQ4 756 aaKnown RBP10.95□□□□□ -0.66
C2CD3-220ENST00000544293 SYCE2Q6PIF2 218 aa10.95□□□□□ -0.66
C2CD3-220ENST00000544293 TMEM184AQ6ZMB5 413 aa10.95□□□□□ -0.66
C2CD3-220ENST00000544293 ASCL5Q7RTU5 278 aa10.95□□□□□ -0.66
C2CD3-220ENST00000544293 KRT23Q9C075 422 aa10.95□□□□□ -0.66
C2CD3-220ENST00000544293 CDH22Q9UJ99 828 aa10.95□□□□□ -0.66
C2CD3-220ENST00000544293 PADI3Q9ULW8 664 aa10.95□□□□□ -0.66
C2CD3-220ENST00000544293 H0Y858 1186 aa10.94□□□□□ -0.66
C2CD3-220ENST00000544293 PPFIA3O75145 1194 aa10.94□□□□□ -0.66
C2CD3-220ENST00000544293 INSRRP14616 1297 aa10.94□□□□□ -0.66
C2CD3-220ENST00000544293 ATF7P17544 494 aaPredicted RBP10.94□□□□□ -0.66
C2CD3-220ENST00000544293 MRPS6P82932 125 aaKnown RBP10.94□□□□□ -0.66
C2CD3-220ENST00000544293 TMEM62Q0P6H9 643 aa10.94□□□□□ -0.66
C2CD3-220ENST00000544293 COL9A3Q14050 684 aaPredicted RBP10.94□□□□□ -0.66
C2CD3-220ENST00000544293 IMMTQ16891 758 aaKnown RBP10.94□□□□□ -0.66
C2CD3-220ENST00000544293 FAM102BQ5T8I3 360 aa10.94□□□□□ -0.66
C2CD3-220ENST00000544293 NPAS4Q8IUM7 802 aa10.94□□□□□ -0.66
C2CD3-220ENST00000544293 SMC5Q8IY18 1101 aa10.94□□□□□ -0.66
C2CD3-220ENST00000544293 SEPT1Q8WYJ6 367 aa10.94□□□□□ -0.66
C2CD3-220ENST00000544293 PRRX2Q99811 253 aa10.94□□□□□ -0.66
C2CD3-220ENST00000544293 UBAC1Q9BSL1 405 aa10.94□□□□□ -0.66
C2CD3-220ENST00000544293 CDHR5Q9HBB8 845 aa10.94□□□□□ -0.66
C2CD3-220ENST00000544293 TLR9Q9NR96 1032 aa10.94□□□□□ -0.66
C2CD3-220ENST00000544293 TUBE1Q9UJT0 475 aa10.94□□□□□ -0.66
C2CD3-220ENST00000544293 ZNF215Q9UL58 517 aaPredicted RBP10.94□□□□□ -0.66
C2CD3-220ENST00000544293 UBIAD1Q9Y5Z9 338 aa10.94□□□□□ -0.66
C2CD3-220ENST00000544293 SQORQ9Y6N5 450 aa10.94□□□□□ -0.66
C2CD3-220ENST00000544293 KIAA1217Q5T5P2 1943 aa10.94□□□□□ -0.66
C2CD3-220ENST00000544293 MYO15AQ9UKN7 3530 aa10.93□□□□□ -0.66
C2CD3-220ENST00000544293 TTC3P53804 2025 aa10.93□□□□□ -0.66
C2CD3-220ENST00000544293 PIK3CDO00329 1044 aa10.93□□□□□ -0.66
C2CD3-220ENST00000544293 IGHDP01880 384 aa10.93□□□□□ -0.66
C2CD3-220ENST00000544293 MFAP1P55081 439 aaKnown RBP10.93□□□□□ -0.66
C2CD3-220ENST00000544293 PTPN21Q16825 1174 aa10.93□□□□□ -0.66
C2CD3-220ENST00000544293 DUSP6Q16828 381 aa10.93□□□□□ -0.66
C2CD3-220ENST00000544293 SUGP1Q8IWZ8 645 aaKnown RBP10.93□□□□□ -0.66
C2CD3-220ENST00000544293 FEZF2Q8TBJ5 459 aa10.93□□□□□ -0.66
C2CD3-220ENST00000544293 IGDCC4Q8TDY8 1250 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms