RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 RPAINQ86UA6 219 aa26.39■■□□□ 1.82
CHFR-222ENST00000544093 RSPH3Q86UC2 560 aa26.39■■□□□ 1.82
CHFR-222ENST00000544093 SMAP1Q8IYB5 467 aaPredicted RBP26.39■■□□□ 1.82
CHFR-222ENST00000544093 GTF3C6Q969F1 213 aa26.39■■□□□ 1.82
CHFR-222ENST00000544093 GUCD1Q96NT3 240 aa26.39■■□□□ 1.82
CHFR-222ENST00000544093 PCDHA11Q9Y5I1 949 aa26.39■■□□□ 1.82
CHFR-222ENST00000544093 GBF1Q92538 1859 aa26.38■■□□□ 1.81
CHFR-222ENST00000544093 IGKV6D-21A0A0A0MT36 114 aa26.38■■□□□ 1.81
CHFR-222ENST00000544093 ABHD14A-ACY1A0A1B0GW23 586 aa26.38■■□□□ 1.81
CHFR-222ENST00000544093 M0R2N6 131 aa26.38■■□□□ 1.81
CHFR-222ENST00000544093 DHX15O43143 795 aaKnown RBP26.38■■□□□ 1.81
CHFR-222ENST00000544093 MIS18BP1Q6P0N0 1132 aa26.38■■□□□ 1.81
CHFR-222ENST00000544093 KRT25Q7Z3Z0 450 aa26.38■■□□□ 1.81
CHFR-222ENST00000544093 PCYT2Q99447 389 aa26.38■■□□□ 1.81
CHFR-222ENST00000544093 ZNF576Q9H609 170 aa26.38■■□□□ 1.81
CHFR-222ENST00000544093 TUBE1Q9UJT0 475 aa26.38■■□□□ 1.81
CHFR-222ENST00000544093 COL6A3P12111 3177 aa26.38■■□□□ 1.81
CHFR-222ENST00000544093 MBLAC1A4D2B0 266 aaPredicted RBP26.37■■□□□ 1.81
CHFR-222ENST00000544093 BACH1O14867 736 aa26.37■■□□□ 1.81
CHFR-222ENST00000544093 IKBKEQ14164 716 aa26.37■■□□□ 1.81
CHFR-222ENST00000544093 ME3Q16798 604 aa26.37■■□□□ 1.81
CHFR-222ENST00000544093 C8orf34Q49A92 452 aa26.37■■□□□ 1.81
CHFR-222ENST00000544093 ABHD15Q6UXT9 468 aa26.37■■□□□ 1.81
CHFR-222ENST00000544093 TBCKQ8TEA7 893 aa26.37■■□□□ 1.81
CHFR-222ENST00000544093 AIFM3Q96NN9 605 aa26.37■■□□□ 1.81
CHFR-222ENST00000544093 PHF20Q9BVI0 1012 aa26.37■■□□□ 1.81
CHFR-222ENST00000544093 ORC3Q9UBD5 711 aaPredicted RBP26.37■■□□□ 1.81
CHFR-222ENST00000544093 TRPC6Q9Y210 931 aa26.37■■□□□ 1.81
CHFR-222ENST00000544093 DDX39AO00148 427 aaKnown RBP26.36■■□□□ 1.81
CHFR-222ENST00000544093 CCNE2O96020 404 aa26.36■■□□□ 1.81
CHFR-222ENST00000544093 PBX2P40425 430 aa26.36■■□□□ 1.81
CHFR-222ENST00000544093 NONOQ15233 471 aaKnown RBP eCLIP26.36■■□□□ 1.81
CHFR-222ENST00000544093 MOXD1Q6UVY6 613 aa26.36■■□□□ 1.81
CHFR-222ENST00000544093 LENG9Q96B70 501 aa26.36■■□□□ 1.81
CHFR-222ENST00000544093 RIT2Q99578 217 aa26.36■■□□□ 1.81
CHFR-222ENST00000544093 CDX2Q99626 313 aaPredicted RBP26.36■■□□□ 1.81
CHFR-222ENST00000544093 SLC28A3Q9HAS3 691 aa26.36■■□□□ 1.81
CHFR-222ENST00000544093 MYH9P35579 1960 aaKnown RBP26.35■■□□□ 1.81
CHFR-222ENST00000544093 KIF28PB7ZC32 967 aa26.35■■□□□ 1.81
CHFR-222ENST00000544093 MBTPS1Q14703 1052 aa26.35■■□□□ 1.81
CHFR-222ENST00000544093 NPY5RQ15761 445 aa26.35■■□□□ 1.81
CHFR-222ENST00000544093 Q4G0T1 1027 aa26.35■■□□□ 1.81
CHFR-222ENST00000544093 FAM26DQ5JW98 314 aa26.35■■□□□ 1.81
CHFR-222ENST00000544093 ZNF302Q9NR11 478 aa26.35■■□□□ 1.81
CHFR-222ENST00000544093 CYP3A7-CYP3A51PA0A087WV96 503 aa26.34■■□□□ 1.81
CHFR-222ENST00000544093 POTEB3A0JP26 581 aa26.34■■□□□ 1.81
CHFR-222ENST00000544093 CTDNEP1O95476 244 aa26.34■■□□□ 1.81
CHFR-222ENST00000544093 INSRRP14616 1297 aa26.34■■□□□ 1.81
CHFR-222ENST00000544093 CYP3A7P24462 503 aa26.34■■□□□ 1.81
CHFR-222ENST00000544093 PLCB4Q15147 1175 aa26.34■■□□□ 1.81
CHFR-222ENST00000544093 POTEBQ6S5H4 581 aa26.34■■□□□ 1.81
CHFR-222ENST00000544093 PCDHA10Q9Y5I2 948 aa26.34■■□□□ 1.81
CHFR-222ENST00000544093 CDH23Q9H251 3354 aa26.33■■□□□ 1.81
CHFR-222ENST00000544093 CCDC194A0A1B0GVG4 234 aa26.33■■□□□ 1.81
CHFR-222ENST00000544093 HBP1O60381 514 aa26.33■■□□□ 1.81
CHFR-222ENST00000544093 PSAPP07602 524 aa26.33■■□□□ 1.81
CHFR-222ENST00000544093 WDR5P61964 334 aaKnown RBP26.33■■□□□ 1.81
CHFR-222ENST00000544093 MARCH8Q5T0T0 291 aa26.33■■□□□ 1.81
CHFR-222ENST00000544093 HERC6Q8IVU3 1022 aa26.33■■□□□ 1.81
CHFR-222ENST00000544093 NECAB1Q8N987 351 aa26.33■■□□□ 1.81
CHFR-222ENST00000544093 ATP8B4Q8TF62 1192 aa26.33■■□□□ 1.81
CHFR-222ENST00000544093 SEPT8Q92599 483 aa26.33■■□□□ 1.81
CHFR-222ENST00000544093 BRMS1Q9HCU9 246 aa26.33■■□□□ 1.81
CHFR-222ENST00000544093 KCNJ14Q9UNX9 436 aa26.33■■□□□ 1.81
CHFR-222ENST00000544093 CHD9Q3L8U1 2897 aa26.33■■□□□ 1.81
CHFR-222ENST00000544093 COL1A2P08123 1366 aa26.33■■□□□ 1.8
CHFR-222ENST00000544093 WDR64B1ANS9 1081 aa26.32■■□□□ 1.8
CHFR-222ENST00000544093 MSH4O15457 936 aa26.32■■□□□ 1.8
CHFR-222ENST00000544093 CTSHP09668 335 aa26.32■■□□□ 1.8
CHFR-222ENST00000544093 PLEKHG4Q58EX7 1191 aa26.32■■□□□ 1.8
CHFR-222ENST00000544093 PDXDC2PQ6P474 469 aa26.32■■□□□ 1.8
CHFR-222ENST00000544093 CCDC60Q8IWA6 550 aaPredicted RBP26.32■■□□□ 1.8
CHFR-222ENST00000544093 IL27Q8NEV9 243 aa26.32■■□□□ 1.8
CHFR-222ENST00000544093 APBB2Q92870 758 aa26.32■■□□□ 1.8
CHFR-222ENST00000544093 SLC5A5Q92911 643 aa26.32■■□□□ 1.8
CHFR-222ENST00000544093 NAP1L4Q99733 375 aaKnown RBP26.32■■□□□ 1.8
CHFR-222ENST00000544093 LIMCH1Q9UPQ0 1083 aa26.32■■□□□ 1.8
CHFR-222ENST00000544093 GAS7O60861 476 aa26.31■■□□□ 1.8
CHFR-222ENST00000544093 SFNP31947 248 aa26.31■■□□□ 1.8
CHFR-222ENST00000544093 IGBP1P78318 339 aa26.31■■□□□ 1.8
CHFR-222ENST00000544093 SWSAP1Q6NVH7 229 aa26.31■■□□□ 1.8
CHFR-222ENST00000544093 NSUN7Q8NE18 718 aaKnown RBP26.31■■□□□ 1.8
CHFR-222ENST00000544093 NKX2-4Q9H2Z4 354 aa26.31■■□□□ 1.8
CHFR-222ENST00000544093 YBX2Q9Y2T7 364 aaKnown RBP26.31■■□□□ 1.8
CHFR-222ENST00000544093 SAMM50Q9Y512 469 aa26.31■■□□□ 1.8
CHFR-222ENST00000544093 PCDHA2Q9Y5H9 948 aa26.31■■□□□ 1.8
CHFR-222ENST00000544093 MAFBQ9Y5Q3 323 aaPredicted RBP26.31■■□□□ 1.8
CHFR-222ENST00000544093 EDIL3O43854 480 aa26.3■■□□□ 1.8
CHFR-222ENST00000544093 LARGE1O95461 756 aa26.3■■□□□ 1.8
CHFR-222ENST00000544093 GCFC2P16383 781 aaKnown RBP26.3■■□□□ 1.8
CHFR-222ENST00000544093 JAK3P52333 1124 aa26.3■■□□□ 1.8
CHFR-222ENST00000544093 RABGGTBP53611 331 aa26.3■■□□□ 1.8
CHFR-222ENST00000544093 LRCH2Q5VUJ6 765 aa26.3■■□□□ 1.8
CHFR-222ENST00000544093 IER5Q5VY09 327 aa26.3■■□□□ 1.8
CHFR-222ENST00000544093 PPP2R2DQ66LE6 453 aa26.3■■□□□ 1.8
CHFR-222ENST00000544093 RUFY4Q6ZNE9 571 aa26.3■■□□□ 1.8
CHFR-222ENST00000544093 DBF4BQ8NFT6 615 aa26.3■■□□□ 1.8
CHFR-222ENST00000544093 BBXQ8WY36 941 aaPredicted RBP26.3■■□□□ 1.8
CHFR-222ENST00000544093 MBOAT7Q96N66 472 aa26.3■■□□□ 1.8
CHFR-222ENST00000544093 TEKT3Q9BXF9 490 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms